RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 PSTPIP2Q9H939 334 aa9.98□□□□□ -0.81
CCDC90B-217ENST00000530253 LUC7LQ9NQ29 371 aaKnown RBP9.98□□□□□ -0.81
CCDC90B-217ENST00000530253 CHST7Q9NS84 486 aa9.98□□□□□ -0.81
CCDC90B-217ENST00000530253 GPR55Q9Y2T6 319 aaPredicted RBP9.98□□□□□ -0.81
CCDC90B-217ENST00000530253 DDX49Q9Y6V7 483 aaKnown RBP9.98□□□□□ -0.81
CCDC90B-217ENST00000530253 LOC102724159A0A0B4J2E5 919 aa9.97□□□□□ -0.81
CCDC90B-217ENST00000530253 A0A1W2PQ45 241 aaPredicted RBP9.97□□□□□ -0.81
CCDC90B-217ENST00000530253 A0A1W2PQY0 241 aa9.97□□□□□ -0.81
CCDC90B-217ENST00000530253 ADCY3O60266 1144 aa9.97□□□□□ -0.81
CCDC90B-217ENST00000530253 EN2P19622 333 aaPredicted RBP9.97□□□□□ -0.81
CCDC90B-217ENST00000530253 PWP2Q15269 919 aaKnown RBP9.97□□□□□ -0.81
CCDC90B-217ENST00000530253 SLC9C1Q4G0N8 1177 aa9.97□□□□□ -0.81
CCDC90B-217ENST00000530253 HSCBQ8IWL3 235 aa9.97□□□□□ -0.81
CCDC90B-217ENST00000530253 DNERQ8NFT8 737 aa9.97□□□□□ -0.81
CCDC90B-217ENST00000530253 IL31RAQ8NI17 732 aa9.97□□□□□ -0.81
CCDC90B-217ENST00000530253 RAET1EQ8TD07 263 aa9.97□□□□□ -0.81
CCDC90B-217ENST00000530253 CCDC12Q8WUD4 166 aaPredicted RBP9.97□□□□□ -0.81
CCDC90B-217ENST00000530253 WASF1Q92558 559 aa9.97□□□□□ -0.81
CCDC90B-217ENST00000530253 CUL5Q93034 780 aa9.97□□□□□ -0.81
CCDC90B-217ENST00000530253 ARMC5Q96C12 935 aa9.97□□□□□ -0.81
CCDC90B-217ENST00000530253 ZNF333Q96JL9 665 aa9.97□□□□□ -0.81
CCDC90B-217ENST00000530253 PRDM14Q9GZV8 571 aa9.97□□□□□ -0.81
CCDC90B-217ENST00000530253 BRMS1Q9HCU9 246 aa9.97□□□□□ -0.81
CCDC90B-217ENST00000530253 PXMP2Q9NR77 195 aa9.97□□□□□ -0.81
CCDC90B-217ENST00000530253 TMEM260Q9NX78 707 aa9.97□□□□□ -0.81
CCDC90B-217ENST00000530253 KCNJ14Q9UNX9 436 aa9.97□□□□□ -0.81
CCDC90B-217ENST00000530253 ZNFX1Q9P2E3 1918 aaKnown RBP9.97□□□□□ -0.81
CCDC90B-217ENST00000530253 SNAI1O95863 264 aaPredicted RBP9.96□□□□□ -0.82
CCDC90B-217ENST00000530253 HMGCRP04035 888 aa9.96□□□□□ -0.82
CCDC90B-217ENST00000530253 CYBAP13498 195 aa9.96□□□□□ -0.82
CCDC90B-217ENST00000530253 SDHBP21912 280 aa9.96□□□□□ -0.82
CCDC90B-217ENST00000530253 GJB2P29033 226 aa9.96□□□□□ -0.82
CCDC90B-217ENST00000530253 CYP2C19P33261 490 aa9.96□□□□□ -0.82
CCDC90B-217ENST00000530253 BMP8BP34820 402 aa9.96□□□□□ -0.82
CCDC90B-217ENST00000530253 MRPL12P52815 198 aaKnown RBP9.96□□□□□ -0.82
CCDC90B-217ENST00000530253 SNW1Q13573 536 aaKnown RBP9.96□□□□□ -0.82
CCDC90B-217ENST00000530253 KRT40Q6A162 431 aa9.96□□□□□ -0.82
CCDC90B-217ENST00000530253 ARMCX2Q7L311 632 aa9.96□□□□□ -0.82
CCDC90B-217ENST00000530253 TMC6Q7Z403 805 aa9.96□□□□□ -0.82
CCDC90B-217ENST00000530253 FAM129CQ86XR2 697 aa9.96□□□□□ -0.82
CCDC90B-217ENST00000530253 MSL3Q8N5Y2 521 aaKnown RBP9.96□□□□□ -0.82
CCDC90B-217ENST00000530253 TRPV1Q8NER1 839 aa9.96□□□□□ -0.82
CCDC90B-217ENST00000530253 RASGRP4Q8TDF6 673 aa9.96□□□□□ -0.82
CCDC90B-217ENST00000530253 CRYGNQ8WXF5 182 aa9.96□□□□□ -0.82
CCDC90B-217ENST00000530253 RMDN3Q96TC7 470 aa9.96□□□□□ -0.82
CCDC90B-217ENST00000530253 PDCD2LQ9BRP1 358 aa9.96□□□□□ -0.82
CCDC90B-217ENST00000530253 TINF2Q9BSI4 451 aa9.96□□□□□ -0.82
CCDC90B-217ENST00000530253 ANO3Q9BYT9 981 aa9.96□□□□□ -0.82
CCDC90B-217ENST00000530253 GLT8D2Q9H1C3 349 aa9.96□□□□□ -0.82
CCDC90B-217ENST00000530253 C6orf50Q9HD87 102 aa9.96□□□□□ -0.82
CCDC90B-217ENST00000530253 KBTBD4Q9NVX7 518 aa9.96□□□□□ -0.82
CCDC90B-217ENST00000530253 SLC5A4Q9NY91 659 aa9.96□□□□□ -0.82
CCDC90B-217ENST00000530253 PRR13Q9NZ81 148 aa9.96□□□□□ -0.82
CCDC90B-217ENST00000530253 KLHL14Q9P2G3 628 aa9.96□□□□□ -0.82
CCDC90B-217ENST00000530253 DNAH12Q6ZR08 3092 aa9.96□□□□□ -0.82
CCDC90B-217ENST00000530253 EDIL3O43854 480 aa9.95□□□□□ -0.82
CCDC90B-217ENST00000530253 MMP1P03956 469 aa9.95□□□□□ -0.82
CCDC90B-217ENST00000530253 GNA11P29992 359 aa9.95□□□□□ -0.82
CCDC90B-217ENST00000530253 SREBF1P36956 1147 aa9.95□□□□□ -0.82
CCDC90B-217ENST00000530253 NLRP5P59047 1200 aa9.95□□□□□ -0.82
CCDC90B-217ENST00000530253 CYP4F8P98187 520 aa9.95□□□□□ -0.82
CCDC90B-217ENST00000530253 CACNB2Q08289 660 aaPredicted RBP9.95□□□□□ -0.82
CCDC90B-217ENST00000530253 PGM5Q15124 567 aa9.95□□□□□ -0.82
CCDC90B-217ENST00000530253 GALNT17Q6IS24 598 aa9.95□□□□□ -0.82
CCDC90B-217ENST00000530253 NLRC3Q7RTR2 1065 aa9.95□□□□□ -0.82
CCDC90B-217ENST00000530253 ERMP1Q7Z2K6 904 aa9.95□□□□□ -0.82
CCDC90B-217ENST00000530253 BLIDQ8IZY5 108 aa9.95□□□□□ -0.82
CCDC90B-217ENST00000530253 REXO1Q8N1G1 1221 aaKnown RBP9.95□□□□□ -0.82
CCDC90B-217ENST00000530253 LINC01356Q8N9X3 169 aa9.95□□□□□ -0.82
CCDC90B-217ENST00000530253 FBXO18Q8NFZ0 1043 aa9.95□□□□□ -0.82
CCDC90B-217ENST00000530253 NSUN6Q8TEA1 469 aaKnown RBP9.95□□□□□ -0.82
CCDC90B-217ENST00000530253 EAF1Q96JC9 268 aaPredicted RBP9.95□□□□□ -0.82
CCDC90B-217ENST00000530253 PGBD1Q96JS3 809 aa9.95□□□□□ -0.82
CCDC90B-217ENST00000530253 C8orf76Q96K31 380 aa9.95□□□□□ -0.82
CCDC90B-217ENST00000530253 EHMT1Q9H9B1 1298 aa9.95□□□□□ -0.82
CCDC90B-217ENST00000530253 ADD3Q9UEY8 706 aaKnown RBP9.95□□□□□ -0.82
CCDC90B-217ENST00000530253 PCDHA6Q9UN73 950 aa9.95□□□□□ -0.82
CCDC90B-217ENST00000530253 SMC3Q9UQE7 1217 aa9.95□□□□□ -0.82
CCDC90B-217ENST00000530253 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.95□□□□□ -0.82
CCDC90B-217ENST00000530253 PCDHB12Q9Y5F1 795 aa9.95□□□□□ -0.82
CCDC90B-217ENST00000530253 PCDHA8Q9Y5H6 950 aa9.95□□□□□ -0.82
CCDC90B-217ENST00000530253 ZC3H12DA2A288 527 aaKnown RBP9.94□□□□□ -0.82
CCDC90B-217ENST00000530253 ASB14A6NK59 587 aa9.94□□□□□ -0.82
CCDC90B-217ENST00000530253 FOSP01100 380 aaPredicted RBP9.94□□□□□ -0.82
CCDC90B-217ENST00000530253 PRKCAP17252 672 aa9.94□□□□□ -0.82
CCDC90B-217ENST00000530253 EIF4A3P38919 411 aaKnown RBP9.94□□□□□ -0.82
CCDC90B-217ENST00000530253 UBXN2AP68543 259 aa9.94□□□□□ -0.82
CCDC90B-217ENST00000530253 MRPS9P82933 396 aaKnown RBP9.94□□□□□ -0.82
CCDC90B-217ENST00000530253 GUCY1B3Q02153 619 aa9.94□□□□□ -0.82
CCDC90B-217ENST00000530253 EARS2Q5JPH6 523 aaKnown RBP9.94□□□□□ -0.82
CCDC90B-217ENST00000530253 JAKMIP3Q5VZ66 844 aa9.94□□□□□ -0.82
CCDC90B-217ENST00000530253 TAPT1Q6NXT6 567 aa9.94□□□□□ -0.82
CCDC90B-217ENST00000530253 FBXL19Q6PCT2 694 aa9.94□□□□□ -0.82
CCDC90B-217ENST00000530253 ZPBP2Q6X784 338 aa9.94□□□□□ -0.82
CCDC90B-217ENST00000530253 DNAJC14Q6Y2X3 702 aaPredicted RBP9.94□□□□□ -0.82
CCDC90B-217ENST00000530253 SLCO6A1Q86UG4 719 aa9.94□□□□□ -0.82
CCDC90B-217ENST00000530253 FBXO16Q8IX29 292 aaPredicted RBP9.94□□□□□ -0.82
CCDC90B-217ENST00000530253 DIS3L2Q8IYB7 885 aaKnown RBP9.94□□□□□ -0.82
CCDC90B-217ENST00000530253 TMEFF1Q8IYR6 380 aa9.94□□□□□ -0.82
CCDC90B-217ENST00000530253 BICD2Q8TD16 824 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms