RNA–Protein interactions for RNA: ENST00000529757.5

PACS1-209, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PACS1, Length 1,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-209ENST00000529757 ASS1P00966 412 aaKnown RBP17.89■□□□□ 0.45
PACS1-209ENST00000529757 CST3P01034 146 aaPredicted RBP17.89■□□□□ 0.45
PACS1-209ENST00000529757 GHRP10912 638 aa17.89■□□□□ 0.45
PACS1-209ENST00000529757 CKBP12277 381 aa17.89■□□□□ 0.45
PACS1-209ENST00000529757 ANXA13P27216 316 aa17.89■□□□□ 0.45
PACS1-209ENST00000529757 CDK7P50613 346 aa17.89■□□□□ 0.45
PACS1-209ENST00000529757 PTK2Q05397 1052 aa17.89■□□□□ 0.45
PACS1-209ENST00000529757 PAK2Q13177 524 aa17.89■□□□□ 0.45
PACS1-209ENST00000529757 SGSM1Q2NKQ1 1148 aa17.89■□□□□ 0.45
PACS1-209ENST00000529757 SPOPLQ6IQ16 392 aa17.89■□□□□ 0.45
PACS1-209ENST00000529757 AGO3Q9H9G7 860 aaKnown RBP17.89■□□□□ 0.45
PACS1-209ENST00000529757 APOBEC3GQ9HC16 384 aaKnown RBP17.89■□□□□ 0.45
PACS1-209ENST00000529757 ERVK-5Q9HDB9 667 aa17.89■□□□□ 0.45
PACS1-209ENST00000529757 IPPQ9Y573 584 aa17.89■□□□□ 0.45
PACS1-209ENST00000529757 SQORQ9Y6N5 450 aa17.89■□□□□ 0.45
PACS1-209ENST00000529757 BRCA2P51587 3418 aa17.88■□□□□ 0.45
PACS1-209ENST00000529757 OFD1O75665 1012 aa17.88■□□□□ 0.45
PACS1-209ENST00000529757 TBXAS1P24557 533 aaPredicted RBP17.88■□□□□ 0.45
PACS1-209ENST00000529757 CD52P31358 61 aa17.88■□□□□ 0.45
PACS1-209ENST00000529757 MYL6P60660 151 aa17.88■□□□□ 0.45
PACS1-209ENST00000529757 LPIN1Q14693 890 aa17.88■□□□□ 0.45
PACS1-209ENST00000529757 ZNF571Q7Z3V5 609 aaPredicted RBP17.88■□□□□ 0.45
PACS1-209ENST00000529757 FAM71AQ8IYT1 594 aa17.88■□□□□ 0.45
PACS1-209ENST00000529757 C1orf127Q8N9H9 656 aa17.88■□□□□ 0.45
PACS1-209ENST00000529757 USP38Q8NB14 1042 aa17.88■□□□□ 0.45
PACS1-209ENST00000529757 KIF12Q96FN5 646 aa17.88■□□□□ 0.45
PACS1-209ENST00000529757 C16orf45Q96MC5 204 aaPredicted RBP17.88■□□□□ 0.45
PACS1-209ENST00000529757 APOL6Q9BWW8 343 aa17.88■□□□□ 0.45
PACS1-209ENST00000529757 PADI3Q9ULW8 664 aa17.88■□□□□ 0.45
PACS1-209ENST00000529757 NUB1Q9Y5A7 615 aa17.88■□□□□ 0.45
PACS1-209ENST00000529757 RALGAPA2Q2PPJ7 1873 aa17.88■□□□□ 0.45
PACS1-209ENST00000529757 ZSCAN20P17040 1043 aaPredicted RBP17.87■□□□□ 0.45
PACS1-209ENST00000529757 USP8P40818 1118 aa17.87■□□□□ 0.45
PACS1-209ENST00000529757 CUL2Q13617 745 aa17.87■□□□□ 0.45
PACS1-209ENST00000529757 PTPN14Q15678 1187 aa17.87■□□□□ 0.45
PACS1-209ENST00000529757 NYAP1Q6ZVC0 841 aa17.87■□□□□ 0.45
PACS1-209ENST00000529757 VPS36Q86VN1 386 aa17.87■□□□□ 0.45
PACS1-209ENST00000529757 SMG8Q8ND04 991 aaKnown RBP17.87■□□□□ 0.45
PACS1-209ENST00000529757 TAF4BQ92750 862 aa17.87■□□□□ 0.45
PACS1-209ENST00000529757 JAKMIP2Q96AA8 810 aa17.87■□□□□ 0.45
PACS1-209ENST00000529757 ZNF333Q96JL9 665 aa17.87■□□□□ 0.45
PACS1-209ENST00000529757 CRISPLD2Q9H0B8 497 aa17.87■□□□□ 0.45
PACS1-209ENST00000529757 CNTN3Q9P232 1028 aa17.87■□□□□ 0.45
PACS1-209ENST00000529757 RBAK-RBAKDNI3L0D1 243 aa17.87■□□□□ 0.45
PACS1-209ENST00000529757 ZNF263O14978 683 aa17.87■□□□□ 0.45
PACS1-209ENST00000529757 KRT19P08727 400 aa17.87■□□□□ 0.45
PACS1-209ENST00000529757 AKAP5P24588 427 aa17.87■□□□□ 0.45
PACS1-209ENST00000529757 CYP27A1Q02318 531 aa17.87■□□□□ 0.45
PACS1-209ENST00000529757 GFPT1Q06210 699 aaPredicted RBP17.87■□□□□ 0.45
PACS1-209ENST00000529757 PKN2Q16513 984 aaKnown RBP17.87■□□□□ 0.45
PACS1-209ENST00000529757 SLC18A3Q16572 532 aa17.87■□□□□ 0.45
PACS1-209ENST00000529757 ZNF699Q32M78 642 aa17.87■□□□□ 0.45
PACS1-209ENST00000529757 SCARA3Q6AZY7 606 aa17.87■□□□□ 0.45
PACS1-209ENST00000529757 ALKAL1Q6UXT8 129 aa17.87■□□□□ 0.45
PACS1-209ENST00000529757 KIAA1328Q86T90 577 aa17.87■□□□□ 0.45
PACS1-209ENST00000529757 FAM126BQ8IXS8 530 aa17.87■□□□□ 0.45
PACS1-209ENST00000529757 HACE1Q8IYU2 909 aa17.87■□□□□ 0.45
PACS1-209ENST00000529757 CAGE1Q8TC20 777 aa17.87■□□□□ 0.45
PACS1-209ENST00000529757 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.87■□□□□ 0.45
PACS1-209ENST00000529757 OSBPL7Q9BZF2 842 aa17.87■□□□□ 0.45
PACS1-209ENST00000529757 PARP2Q9UGN5 583 aa17.87■□□□□ 0.45
PACS1-209ENST00000529757 SIX4Q9UIU6 781 aa17.87■□□□□ 0.45
PACS1-209ENST00000529757 ITGA11Q9UKX5 1188 aa17.87■□□□□ 0.45
PACS1-209ENST00000529757 PCDHB2Q9Y5E7 798 aa17.87■□□□□ 0.45
PACS1-209ENST00000529757 CITO14578 2027 aa17.86■□□□□ 0.45
PACS1-209ENST00000529757 ITGB3P05106 788 aa17.86■□□□□ 0.45
PACS1-209ENST00000529757 UMODL1Q5DID0 1318 aa17.86■□□□□ 0.45
PACS1-209ENST00000529757 U2AF1L4Q8WU68 220 aaKnown RBP17.86■□□□□ 0.45
PACS1-209ENST00000529757 ARMC5Q96C12 935 aa17.86■□□□□ 0.45
PACS1-209ENST00000529757 TSPAN18Q96SJ8 248 aa17.86■□□□□ 0.45
PACS1-209ENST00000529757 ARID3AQ99856 593 aa17.86■□□□□ 0.45
PACS1-209ENST00000529757 NIF3L1Q9GZT8 377 aa17.86■□□□□ 0.45
PACS1-209ENST00000529757 XYLT2Q9H1B5 865 aa17.86■□□□□ 0.45
PACS1-209ENST00000529757 RNF39Q9H2S5 420 aa17.86■□□□□ 0.45
PACS1-209ENST00000529757 FAM105AQ9NUU6 356 aa17.86■□□□□ 0.45
PACS1-209ENST00000529757 DPP3Q9NY33 737 aa17.86■□□□□ 0.45
PACS1-209ENST00000529757 ADAMTS1Q9UHI8 967 aa17.86■□□□□ 0.45
PACS1-209ENST00000529757 R3HCC1Q9Y3T6 440 aaKnown RBP17.86■□□□□ 0.45
PACS1-209ENST00000529757 SGPL1O95470 568 aa17.85■□□□□ 0.45
PACS1-209ENST00000529757 TFRCP02786 760 aaKnown RBP17.85■□□□□ 0.45
PACS1-209ENST00000529757 KRT5P13647 590 aa17.85■□□□□ 0.45
PACS1-209ENST00000529757 LBX1P52954 281 aa17.85■□□□□ 0.45
PACS1-209ENST00000529757 ARHGAP29Q52LW3 1261 aa17.85■□□□□ 0.45
PACS1-209ENST00000529757 XKR4Q5GH76 650 aa17.85■□□□□ 0.45
PACS1-209ENST00000529757 DNTTIP2Q5QJE6 756 aaKnown RBP17.85■□□□□ 0.45
PACS1-209ENST00000529757 TRAF7Q6Q0C0 670 aa17.85■□□□□ 0.45
PACS1-209ENST00000529757 CXorf38Q8TB03 319 aa17.85■□□□□ 0.45
PACS1-209ENST00000529757 ZMAT2Q96NC0 199 aaKnown RBP17.85■□□□□ 0.45
PACS1-209ENST00000529757 IFIH1Q9BYX4 1025 aaKnown RBP17.85■□□□□ 0.45
PACS1-209ENST00000529757 CXCL16Q9H2A7 254 aa17.85■□□□□ 0.45
PACS1-209ENST00000529757 LUC7LQ9NQ29 371 aaKnown RBP17.85■□□□□ 0.45
PACS1-209ENST00000529757 LZTFL1Q9NQ48 299 aa17.85■□□□□ 0.45
PACS1-209ENST00000529757 PCDHA13Q9Y5I0 950 aa17.85■□□□□ 0.45
PACS1-209ENST00000529757 A0A087X0T9 212 aa17.84■□□□□ 0.45
PACS1-209ENST00000529757 A0A0U1RQJ8 604 aa17.84■□□□□ 0.45
PACS1-209ENST00000529757 KIF2AO00139 706 aaPredicted RBP17.84■□□□□ 0.45
PACS1-209ENST00000529757 CYP26A1O43174 497 aa17.84■□□□□ 0.45
PACS1-209ENST00000529757 CD4P01730 458 aa17.84■□□□□ 0.45
PACS1-209ENST00000529757 FAM228BP0C875 321 aa17.84■□□□□ 0.45
PACS1-209ENST00000529757 TNNT1P13805 278 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms