RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 ACTN4O43707 911 aaKnown RBP9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 PFKFB2O60825 505 aa9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 DKC1O60832 514 aaKnown RBP eCLIP9.43□□□□□ -0.92e-6■■□□□ 11.7
TGFBR3-208ENST00000529608 TADA2AO75478 443 aa9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 XRCC6P12956 609 aaKnown RBP eCLIP9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 TGM1P22735 817 aa9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 TARSP26639 723 aaKnown RBP9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 RARRES1P49788 294 aa9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 POU5F1BQ06416 359 aa9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 MXD4Q14582 209 aaPredicted RBP9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 MLF2Q15773 248 aaPredicted RBP9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 PSMD5Q16401 504 aa9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 SLC5A9Q2M3M2 681 aa9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 SLC44A4Q53GD3 710 aa9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 FAM171A1Q5VUB5 890 aa9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 FOXD4L5Q5VV16 416 aaPredicted RBP9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 GALNT17Q6IS24 598 aa9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 SLC27A1Q6PCB7 646 aa9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 CD300LGQ6UXG3 332 aa9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 MAEAQ7L5Y9 396 aa9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 OTUD6AQ7L8S5 288 aa9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 CEP57Q86XR8 500 aa9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 NPAS3Q8IXF0 933 aa9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 EXOC8Q8IYI6 725 aa9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 GPR65Q8IYL9 337 aa9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 FOXD4L4Q8WXT5 416 aaPredicted RBP9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 ING5Q8WYH8 240 aa9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 PIK3R5Q8WYR1 880 aa9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 BSNDQ8WZ55 320 aa9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 ZNF516Q92618 1163 aa9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 NELL1Q92832 810 aa9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 TNFRSF25Q93038 417 aa9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 NFKBIZQ9BYH8 718 aa9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 TRIM6Q9C030 488 aaPredicted RBP9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 POLR3FQ9H1D9 316 aaPredicted RBP9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 SNTG2Q9NY99 539 aa9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 POLIQ9UNA4 740 aa9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 KMT2BQ9UMN6 2715 aaPredicted RBP9.43□□□□□ -0.9
TGFBR3-208ENST00000529608 SF3B1O75533 1304 aaKnown RBP eCLIP9.42□□□□□ -0.9
TGFBR3-208ENST00000529608 FAM170BA6NMN3 283 aa9.42□□□□□ -0.9
TGFBR3-208ENST00000529608 CPLX1O14810 134 aa9.42□□□□□ -0.9
TGFBR3-208ENST00000529608 NR1I2O75469 434 aa9.42□□□□□ -0.9
TGFBR3-208ENST00000529608 LETM1O95202 739 aaPredicted RBP9.42□□□□□ -0.9
TGFBR3-208ENST00000529608 LYPLA2O95372 231 aa9.42□□□□□ -0.9
TGFBR3-208ENST00000529608 FDPSP14324 419 aaKnown RBP9.42□□□□□ -0.9
TGFBR3-208ENST00000529608 GCFC2P16383 781 aaKnown RBP9.42□□□□□ -0.9
TGFBR3-208ENST00000529608 HMGN5P82970 282 aaKnown RBP9.42□□□□□ -0.9
TGFBR3-208ENST00000529608 CSTF1Q05048 431 aaKnown RBP9.42□□□□□ -0.9
TGFBR3-208ENST00000529608 ST3GAL1Q11201 340 aa9.42□□□□□ -0.9
TGFBR3-208ENST00000529608 TUSC3Q13454 348 aa9.42□□□□□ -0.9
TGFBR3-208ENST00000529608 UBXN2BQ14CS0 331 aa9.42□□□□□ -0.9
TGFBR3-208ENST00000529608 PCBP1Q15365 356 aaKnown RBP eCLIP9.42□□□□□ -0.91e-6■□□□□ 8.9
TGFBR3-208ENST00000529608 KMT5BQ4FZB7 885 aa9.42□□□□□ -0.9
TGFBR3-208ENST00000529608 PPM1LQ5SGD2 360 aa9.42□□□□□ -0.9
TGFBR3-208ENST00000529608 EEF1DP3Q658K8 133 aa9.42□□□□□ -0.9
TGFBR3-208ENST00000529608 CAVIN1Q6NZI2 390 aaKnown RBP9.42□□□□□ -0.9
TGFBR3-208ENST00000529608 ELMSAN1Q6PJG2 1045 aa9.42□□□□□ -0.9
TGFBR3-208ENST00000529608 ZC3H14Q6PJT7 736 aaKnown RBP9.42□□□□□ -0.9
TGFBR3-208ENST00000529608 ZBTB44Q8NCP5 570 aa9.42□□□□□ -0.9
TGFBR3-208ENST00000529608 SLC7A14Q8TBB6 771 aa9.42□□□□□ -0.9
TGFBR3-208ENST00000529608 GPT2Q8TD30 523 aa9.42□□□□□ -0.9
TGFBR3-208ENST00000529608 TTPALQ9BTX7 342 aa9.42□□□□□ -0.9
TGFBR3-208ENST00000529608 PDZD7Q9H5P4 517 aa9.42□□□□□ -0.9
TGFBR3-208ENST00000529608 LTB4R2Q9NPC1 389 aa9.42□□□□□ -0.9
TGFBR3-208ENST00000529608 SPATA6Q9NWH7 488 aaPredicted RBP9.42□□□□□ -0.9
TGFBR3-208ENST00000529608 PCDHB3Q9Y5E6 796 aa9.42□□□□□ -0.9
TGFBR3-208ENST00000529608 ZFP37Q9Y6Q3 630 aaPredicted RBP9.42□□□□□ -0.9
TGFBR3-208ENST00000529608 PDCD11Q14690 1871 aaKnown RBP9.42□□□□□ -0.9
TGFBR3-208ENST00000529608 ZMYM2Q9UBW7 1377 aa9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 CEP250Q9BV73 2442 aa9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 I3L4J1 428 aa9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 USO1O60763 962 aaKnown RBP9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 KINO60870 393 aaKnown RBP9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 LILRB5O75023 590 aa9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 DGAT1O75907 488 aa9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 RECQL4O94761 1208 aa9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 HNRNPA1P09651 372 aaKnown RBP eCLIP9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 SPATA31C1P0DKV0 1188 aa9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 OR1D2P34982 312 aa9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 ATXN1P54253 815 aaKnown RBP9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 COPS2P61201 443 aa9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 UBE2HP62256 183 aa9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 PRKCQQ04759 706 aa9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 RAB33AQ14088 237 aa9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 TFDP1Q14186 410 aa9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 ZNF528Q3MIS6 628 aa9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 ZSCAN23Q3MJ62 389 aa9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 AXDND1Q5T1B0 1012 aaPredicted RBP9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 BLOC1S3Q6QNY0 202 aa9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 NOSTRINQ8IVI9 506 aa9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 C3orf58Q8NDZ4 430 aa9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 CLDN23Q96B33 292 aa9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 MCRS1Q96EZ8 462 aa9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 FZD8Q9H461 694 aa9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 ZSCAN16Q9H4T2 348 aaPredicted RBP9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 GOLGA2P5Q9HBQ8 144 aa9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 POLD4Q9HCU8 107 aa9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 PARD6AQ9NPB6 346 aa9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 HEBP1Q9NRV9 189 aa9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 ANKEF1Q9NU02 776 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms