RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 SIX1Q15475 284 aaPredicted RBP16.88■□□□□ 0.29
TM9SF1-208ENST00000529332 SNRNP35Q16560 246 aaKnown RBP16.88■□□□□ 0.29
TM9SF1-208ENST00000529332 SEL1L2Q5TEA6 688 aa16.88■□□□□ 0.29
TM9SF1-208ENST00000529332 PLA2G4FQ68DD2 849 aa16.88■□□□□ 0.29
TM9SF1-208ENST00000529332 HOOK3Q86VS8 718 aa16.88■□□□□ 0.29
TM9SF1-208ENST00000529332 ZNF564Q8TBZ8 553 aaPredicted RBP16.88■□□□□ 0.29
TM9SF1-208ENST00000529332 HELQQ8TDG4 1101 aa16.88■□□□□ 0.29
TM9SF1-208ENST00000529332 ELMO3Q96BJ8 720 aa16.88■□□□□ 0.29
TM9SF1-208ENST00000529332 CCDC127Q96BQ5 260 aa16.88■□□□□ 0.29
TM9SF1-208ENST00000529332 FGD4Q96M96 766 aa16.88■□□□□ 0.29
TM9SF1-208ENST00000529332 KIFC3Q9BVG8 833 aa16.88■□□□□ 0.29
TM9SF1-208ENST00000529332 SEMA4AQ9H3S1 761 aa16.88■□□□□ 0.29
TM9SF1-208ENST00000529332 IGF2BP3O00425 579 aaKnown RBP eCLIP16.87■□□□□ 0.29
TM9SF1-208ENST00000529332 GGPS1O95749 300 aa16.87■□□□□ 0.29
TM9SF1-208ENST00000529332 ADORA2AP29274 412 aa16.87■□□□□ 0.29
TM9SF1-208ENST00000529332 FSTL1Q12841 308 aa16.87■□□□□ 0.29
TM9SF1-208ENST00000529332 NEDD9Q14511 834 aa16.87■□□□□ 0.29
TM9SF1-208ENST00000529332 SLC29A2Q14542 456 aa16.87■□□□□ 0.29
TM9SF1-208ENST00000529332 CYP1B1Q16678 543 aa16.87■□□□□ 0.29
TM9SF1-208ENST00000529332 DENND2CQ68D51 928 aa16.87■□□□□ 0.29
TM9SF1-208ENST00000529332 SLC13A5Q86YT5 568 aaPredicted RBP16.87■□□□□ 0.29
TM9SF1-208ENST00000529332 C4orf19Q8IY42 314 aa16.87■□□□□ 0.29
TM9SF1-208ENST00000529332 MORC4Q8TE76 937 aa16.87■□□□□ 0.29
TM9SF1-208ENST00000529332 ATP6V0A1Q93050 837 aa16.87■□□□□ 0.29
TM9SF1-208ENST00000529332 PODXLO00592 558 aa16.87■□□□□ 0.29
TM9SF1-208ENST00000529332 TOMM70O94826 608 aa16.87■□□□□ 0.29
TM9SF1-208ENST00000529332 RARAP10276 462 aa16.87■□□□□ 0.29
TM9SF1-208ENST00000529332 CYP11B1P15538 503 aa16.87■□□□□ 0.29
TM9SF1-208ENST00000529332 MFAP3P55082 362 aa16.87■□□□□ 0.29
TM9SF1-208ENST00000529332 SNRPFP62306 86 aaKnown RBP16.87■□□□□ 0.29
TM9SF1-208ENST00000529332 FAM102BQ5T8I3 360 aa16.87■□□□□ 0.29
TM9SF1-208ENST00000529332 IFNL1Q8IU54 200 aa16.87■□□□□ 0.29
TM9SF1-208ENST00000529332 SUGP1Q8IWZ8 645 aaKnown RBP16.87■□□□□ 0.29
TM9SF1-208ENST00000529332 TATDN2Q93075 761 aa16.87■□□□□ 0.29
TM9SF1-208ENST00000529332 ZNF653Q96CK0 615 aa16.87■□□□□ 0.29
TM9SF1-208ENST00000529332 SEC16BQ96JE7 1060 aa16.87■□□□□ 0.29
TM9SF1-208ENST00000529332 CNOT10Q9H9A5 744 aaKnown RBP16.87■□□□□ 0.29
TM9SF1-208ENST00000529332 TOPORSQ9NS56 1045 aaPredicted RBP16.87■□□□□ 0.29
TM9SF1-208ENST00000529332 MCM3APO60318 1980 aa16.86■□□□□ 0.29
TM9SF1-208ENST00000529332 COILP38432 576 aaPredicted RBP16.86■□□□□ 0.29
TM9SF1-208ENST00000529332 ACTN3Q08043 901 aaPredicted RBP16.86■□□□□ 0.29
TM9SF1-208ENST00000529332 ERMARDQ5T6L9 678 aa16.86■□□□□ 0.29
TM9SF1-208ENST00000529332 MIS18BP1Q6P0N0 1132 aa16.86■□□□□ 0.29
TM9SF1-208ENST00000529332 GPR142Q7Z601 462 aa16.86■□□□□ 0.29
TM9SF1-208ENST00000529332 PLEKHH3Q7Z736 793 aa16.86■□□□□ 0.29
TM9SF1-208ENST00000529332 TMEM161BQ8NDZ6 487 aa16.86■□□□□ 0.29
TM9SF1-208ENST00000529332 PARD3BQ8TEW8 1205 aa16.86■□□□□ 0.29
TM9SF1-208ENST00000529332 PGM2Q96G03 612 aa16.86■□□□□ 0.29
TM9SF1-208ENST00000529332 ADAM7Q9H2U9 754 aa16.86■□□□□ 0.29
TM9SF1-208ENST00000529332 TBX20Q9UMR3 447 aa16.86■□□□□ 0.29
TM9SF1-208ENST00000529332 COQ4Q9Y3A0 265 aa16.86■□□□□ 0.29
TM9SF1-208ENST00000529332 ADGRA2Q96PE1 1338 aa16.86■□□□□ 0.29
TM9SF1-208ENST00000529332 TLDC2A0PJX2 215 aa16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 FAM155AB1AL88 458 aaPredicted RBP16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 SPOPO43791 374 aa16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 DRD4P21917 467 aa16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 KCNJ1P48048 391 aa16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 ACTR2P61160 394 aa16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 CDR2Q01850 454 aa16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 SPRED3Q2MJR0 410 aa16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 ZNF792Q3KQV3 632 aa16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 XKR9Q5GH70 373 aa16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 KRT39Q6A163 491 aa16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 ZNF467Q7Z7K2 595 aaPredicted RBP16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 DDX1Q92499 740 aaKnown RBP16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 DHX38Q92620 1227 aaKnown RBP16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 XPO6Q96QU8 1125 aaKnown RBP16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 TIPINQ9BVW5 301 aa16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 OSBPL7Q9BZF2 842 aa16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 AZI2Q9H6S1 392 aa16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 GTF3C4Q9UKN8 822 aa16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 PTPN22Q9Y2R2 807 aa16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 MYH9P35579 1960 aaKnown RBP16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 SMIM23A6NLE4 172 aa16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 CCDC169A6NNP5 214 aa16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 UBA1P22314 1058 aaKnown RBP16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 FGFR4P22455 802 aa16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 CNGA1P29973 690 aa16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 NPTX2P47972 431 aa16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 GPC3P51654 580 aa16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 IFI35P80217 286 aaPredicted RBP16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 GRB14Q14449 540 aa16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 CYFIP1Q7L576 1253 aa16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 MAP4K3Q8IVH8 894 aa16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 CCDC105Q8IYK2 499 aa16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 UHMK1Q8TAS1 419 aaKnown RBP16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 TAS1R2Q8TE23 839 aa16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 CENPTQ96BT3 561 aa16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 FAM129AQ9BZQ8 928 aa16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 TMEM8AQ9HCN3 771 aa16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 ANKEF1Q9NU02 776 aa16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 SLC5A4Q9NY91 659 aa16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 CPA4Q9UI42 421 aa16.85■□□□□ 0.29
TM9SF1-208ENST00000529332 ARID2Q68CP9 1835 aa16.84■□□□□ 0.29
TM9SF1-208ENST00000529332 H0YHG0 523 aa16.84■□□□□ 0.29
TM9SF1-208ENST00000529332 CALCAP01258 141 aa16.84■□□□□ 0.29
TM9SF1-208ENST00000529332 CHN1P15882 459 aa16.84■□□□□ 0.29
TM9SF1-208ENST00000529332 MMP13P45452 471 aa16.84■□□□□ 0.29
TM9SF1-208ENST00000529332 SP2Q02086 613 aa16.84■□□□□ 0.29
TM9SF1-208ENST00000529332 SP4Q02446 784 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms