RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 PHGDHO43175 533 aaKnown RBP3.98□□□□□ -1.77
BRCA2-203ENST00000528762 FRS3O43559 492 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 PRAMEF4O60810 478 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 TMEM127O75204 238 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 KCNQ1P51787 676 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 CASP5P51878 434 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 RAB1AP62820 205 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 POU5F1BQ06416 359 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 SNAPC2Q13487 334 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 PLS1Q14651 629 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 USP39Q53GS9 565 aaKnown RBP3.98□□□□□ -1.77
BRCA2-203ENST00000528762 APOA5Q6Q788 366 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 GADL1Q6ZQY3 521 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 UNC5BQ8IZJ1 945 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 SH2D3CQ8N5H7 860 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 MYRIPQ8NFW9 859 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 DEPTORQ8TB45 409 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 ANKS1AQ92625 1134 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 EXTL1Q92935 676 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 NKD2Q969F2 451 aaPredicted RBP3.98□□□□□ -1.77
BRCA2-203ENST00000528762 MTFMTQ96DP5 389 aaKnown RBP3.98□□□□□ -1.77
BRCA2-203ENST00000528762 SLC35A4Q96G79 324 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 MRGPRX4Q96LA9 322 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 NT5C1BQ96P26 610 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 OR14A2Q96R54 314 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 UHRF1Q96T88 793 aaPredicted RBP3.98□□□□□ -1.77
BRCA2-203ENST00000528762 C22orf23Q9BZE7 217 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 PCED1AQ9H1Q7 454 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 C14orf93Q9H972 538 aaKnown RBP3.98□□□□□ -1.77
BRCA2-203ENST00000528762 BCO1Q9HAY6 547 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 ARFGAP3Q9NP61 516 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 CASS4Q9NQ75 786 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 LUZP4Q9P127 313 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 LRCH1Q9Y2L9 728 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 VWA7Q9Y334 891 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 SNX13Q9Y5W8 968 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 MYBBP1AQ9BQG0 1328 aaKnown RBP3.97□□□□□ -1.77
BRCA2-203ENST00000528762 FOXN3O00409 490 aaPredicted RBP3.97□□□□□ -1.77
BRCA2-203ENST00000528762 CYR61O00622 381 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 TBX3O15119 743 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 CDC14BO60729 498 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 GASTP01350 101 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 TYRP14679 529 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 ACO1P21399 889 aaKnown RBP3.97□□□□□ -1.77
BRCA2-203ENST00000528762 POLD1P28340 1107 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 IL6STP40189 918 aaPredicted RBP3.97□□□□□ -1.77
BRCA2-203ENST00000528762 HALP42357 657 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 SLC6A9P48067 706 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 PPM1FP49593 454 aaPredicted RBP3.97□□□□□ -1.77
BRCA2-203ENST00000528762 PRIM2P49643 509 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 STAT5BP51692 787 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 RAC3P60763 192 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 FMO1Q01740 532 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 TARDBPQ13148 414 aaKnown RBP eCLIP3.97□□□□□ -1.77
BRCA2-203ENST00000528762 RAB39AQ14964 217 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 PRKD1Q15139 912 aaPredicted RBP3.97□□□□□ -1.77
BRCA2-203ENST00000528762 TBR1Q16650 682 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 ZNF568Q3ZCX4 644 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 HS1BP3Q53T59 392 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 ANO1Q5XXA6 986 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 USP51Q70EK9 711 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 RTKN2Q8IZC4 609 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 PQLC1Q8N2U9 271 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 OR2C3Q8N628 320 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 PLA2G15Q8NCC3 412 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 PIK3C3Q8NEB9 887 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 OR7D4Q8NG98 312 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 OR10H5Q8NGA6 315 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 STON2Q8WXE9 905 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 TMX3Q96JJ7 454 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 KATNBL1Q9H079 304 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 BTBD1Q9H0C5 482 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 C12orf65Q9H3J6 166 aaKnown RBP3.97□□□□□ -1.77
BRCA2-203ENST00000528762 SEC61A2Q9H9S3 476 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 ZMAT3Q9HA38 289 aaKnown RBP3.97□□□□□ -1.77
BRCA2-203ENST00000528762 ZNF287Q9HBT7 754 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 SARS2Q9NP81 518 aaKnown RBP3.97□□□□□ -1.77
BRCA2-203ENST00000528762 TLR9Q9NR96 1032 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 CNNM1Q9NRU3 951 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 ABCF2Q9UG63 623 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 STAP2Q9UGK3 403 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 CPA4Q9UI42 421 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 SIK3Q9Y2K2 1263 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 PCDHA1Q9Y5I3 950 aa3.97□□□□□ -1.77
BRCA2-203ENST00000528762 USP19O94966 1318 aa3.96□□□□□ -1.77
BRCA2-203ENST00000528762 C2orf78A6NCI8 922 aa3.96□□□□□ -1.78
BRCA2-203ENST00000528762 ISM1B1AKI9 464 aa3.96□□□□□ -1.78
BRCA2-203ENST00000528762 KPNA5O15131 536 aa3.96□□□□□ -1.78
BRCA2-203ENST00000528762 SH3BP5O60239 455 aa3.96□□□□□ -1.78
BRCA2-203ENST00000528762 NBNO60934 754 aa3.96□□□□□ -1.78
BRCA2-203ENST00000528762 ALDH1A2O94788 518 aa3.96□□□□□ -1.78
BRCA2-203ENST00000528762 KITP10721 976 aa3.96□□□□□ -1.78
BRCA2-203ENST00000528762 DDCP20711 480 aa3.96□□□□□ -1.78
BRCA2-203ENST00000528762 MALP21145 153 aa3.96□□□□□ -1.78
BRCA2-203ENST00000528762 SLC7A1P30825 629 aa3.96□□□□□ -1.78
BRCA2-203ENST00000528762 CRHR1P34998 444 aa3.96□□□□□ -1.78
BRCA2-203ENST00000528762 SREBF1P36956 1147 aa3.96□□□□□ -1.78
BRCA2-203ENST00000528762 KIR2DL3P43628 341 aa3.96□□□□□ -1.78
BRCA2-203ENST00000528762 MEOX1P50221 254 aa3.96□□□□□ -1.78
BRCA2-203ENST00000528762 ZNF543Q08ER8 600 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms