RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 MAP4K3Q8IVH8 894 aa13.78□□□□□ -0.2
CCDC90B-205ENST00000525916 C3orf58Q8NDZ4 430 aa13.78□□□□□ -0.2
CCDC90B-205ENST00000525916 IRF7Q92985 503 aa13.78□□□□□ -0.2
CCDC90B-205ENST00000525916 PRIMPOLQ96LW4 560 aa13.78□□□□□ -0.2
CCDC90B-205ENST00000525916 TBC1D32Q96NH3 1257 aa13.78□□□□□ -0.2
CCDC90B-205ENST00000525916 UPF2Q9HAU5 1272 aaKnown RBP13.78□□□□□ -0.2
CCDC90B-205ENST00000525916 GOLGA2P5Q9HBQ8 144 aa13.78□□□□□ -0.2
CCDC90B-205ENST00000525916 ANKEF1Q9NU02 776 aa13.78□□□□□ -0.2
CCDC90B-205ENST00000525916 PRMT7Q9NVM4 692 aaPredicted RBP13.78□□□□□ -0.2
CCDC90B-205ENST00000525916 USP20Q9Y2K6 914 aa13.78□□□□□ -0.2
CCDC90B-205ENST00000525916 BACE2Q9Y5Z0 518 aa13.78□□□□□ -0.2
CCDC90B-205ENST00000525916 CYP46A1Q9Y6A2 500 aa13.78□□□□□ -0.2
CCDC90B-205ENST00000525916 LAMA1P25391 3075 aa13.78□□□□□ -0.2
CCDC90B-205ENST00000525916 ANK1P16157 1881 aa13.78□□□□□ -0.2
CCDC90B-205ENST00000525916 WDR27A2RRH5 827 aa13.77□□□□□ -0.21
CCDC90B-205ENST00000525916 TMEM189-UBE2V1I3L0A0 370 aa13.77□□□□□ -0.21
CCDC90B-205ENST00000525916 PRRG1O14668 218 aa13.77□□□□□ -0.21
CCDC90B-205ENST00000525916 CPLX1O14810 134 aa13.77□□□□□ -0.21
CCDC90B-205ENST00000525916 N4BP3O15049 544 aa13.77□□□□□ -0.21
CCDC90B-205ENST00000525916 EDN1P05305 212 aa13.77□□□□□ -0.21
CCDC90B-205ENST00000525916 PSMC3P17980 439 aa13.77□□□□□ -0.21
CCDC90B-205ENST00000525916 CCNE1P24864 410 aa13.77□□□□□ -0.21
CCDC90B-205ENST00000525916 BRCC3P46736 316 aa13.77□□□□□ -0.21
CCDC90B-205ENST00000525916 CLCNKBP51801 687 aa13.77□□□□□ -0.21
CCDC90B-205ENST00000525916 TOB2Q14106 344 aaPredicted RBP13.77□□□□□ -0.21
CCDC90B-205ENST00000525916 EARS2Q5JPH6 523 aaKnown RBP13.77□□□□□ -0.21
CCDC90B-205ENST00000525916 N4BP2L1Q5TBK1 243 aaPredicted RBP13.77□□□□□ -0.21
CCDC90B-205ENST00000525916 HEATR6Q6AI08 1181 aaKnown RBP13.77□□□□□ -0.21
CCDC90B-205ENST00000525916 IL31Q6EBC2 164 aa13.77□□□□□ -0.21
CCDC90B-205ENST00000525916 CD300LGQ6UXG3 332 aa13.77□□□□□ -0.21
CCDC90B-205ENST00000525916 ANKS3Q6ZW76 656 aa13.77□□□□□ -0.21
CCDC90B-205ENST00000525916 FAM160A2Q8N612 972 aaPredicted RBP13.77□□□□□ -0.21
CCDC90B-205ENST00000525916 OXER1Q8TDS5 423 aa13.77□□□□□ -0.21
CCDC90B-205ENST00000525916 PIGOQ8TEQ8 1089 aa13.77□□□□□ -0.21
CCDC90B-205ENST00000525916 NUP205Q92621 2012 aa13.77□□□□□ -0.21
CCDC90B-205ENST00000525916 ZSWIM3Q96MP5 696 aa13.77□□□□□ -0.21
CCDC90B-205ENST00000525916 LARP6Q9BRS8 491 aaKnown RBP13.77□□□□□ -0.21
CCDC90B-205ENST00000525916 FZD8Q9H461 694 aa13.77□□□□□ -0.21
CCDC90B-205ENST00000525916 RBM12Q9NTZ6 932 aaKnown RBP13.77□□□□□ -0.21
CCDC90B-205ENST00000525916 GDAQ9Y2T3 454 aa13.77□□□□□ -0.21
CCDC90B-205ENST00000525916 FAM205CA6NFA0 338 aa13.76□□□□□ -0.21
CCDC90B-205ENST00000525916 K7ESF4 209 aa13.76□□□□□ -0.21
CCDC90B-205ENST00000525916 LYPLA2O95372 231 aa13.76□□□□□ -0.21
CCDC90B-205ENST00000525916 HOXC13P31276 330 aa13.76□□□□□ -0.21
CCDC90B-205ENST00000525916 ELF1P32519 619 aa13.76□□□□□ -0.21
CCDC90B-205ENST00000525916 VIPR2P41587 438 aa13.76□□□□□ -0.21
CCDC90B-205ENST00000525916 STK3Q13188 491 aa13.76□□□□□ -0.21
CCDC90B-205ENST00000525916 PTGDRQ13258 359 aa13.76□□□□□ -0.21
CCDC90B-205ENST00000525916 PRPF4BQ13523 1007 aaKnown RBP13.76□□□□□ -0.21
CCDC90B-205ENST00000525916 FAM187BQ17R55 369 aa13.76□□□□□ -0.21
CCDC90B-205ENST00000525916 AASDHQ4L235 1098 aaPredicted RBP13.76□□□□□ -0.21
CCDC90B-205ENST00000525916 EEF1DP3Q658K8 133 aa13.76□□□□□ -0.21
CCDC90B-205ENST00000525916 CDCA2Q69YH5 1023 aaPredicted RBP13.76□□□□□ -0.21
CCDC90B-205ENST00000525916 Q6ZS52 159 aa13.76□□□□□ -0.21
CCDC90B-205ENST00000525916 PDZD4Q76G19 769 aaPredicted RBP13.76□□□□□ -0.21
CCDC90B-205ENST00000525916 ZBTB8OSQ8IWT0 167 aa13.76□□□□□ -0.21
CCDC90B-205ENST00000525916 SLFN12Q8IYM2 578 aa13.76□□□□□ -0.21
CCDC90B-205ENST00000525916 HS6ST3Q8IZP7 471 aa13.76□□□□□ -0.21
CCDC90B-205ENST00000525916 FAM177A1Q8N128 213 aaPredicted RBP13.76□□□□□ -0.21
CCDC90B-205ENST00000525916 ZNF461Q8TAF7 563 aa13.76□□□□□ -0.21
CCDC90B-205ENST00000525916 DDX1Q92499 740 aaKnown RBP13.76□□□□□ -0.21
CCDC90B-205ENST00000525916 PPP1R10Q96QC0 940 aaKnown RBP13.76□□□□□ -0.21
CCDC90B-205ENST00000525916 HSD17B14Q9BPX1 270 aa13.76□□□□□ -0.21
CCDC90B-205ENST00000525916 ADPGKQ9BRR6 497 aa13.76□□□□□ -0.21
CCDC90B-205ENST00000525916 TRPV5Q9NQA5 729 aa13.76□□□□□ -0.21
CCDC90B-205ENST00000525916 GJB4Q9NTQ9 266 aa13.76□□□□□ -0.21
CCDC90B-205ENST00000525916 INSL5Q9Y5Q6 135 aa13.76□□□□□ -0.21
CCDC90B-205ENST00000525916 DENND4CQ5VZ89 1909 aa13.76□□□□□ -0.21
CCDC90B-205ENST00000525916 ZNF197O14709 1029 aa13.75□□□□□ -0.21
CCDC90B-205ENST00000525916 ZNF263O14978 683 aa13.75□□□□□ -0.21
CCDC90B-205ENST00000525916 DTNBO60941 627 aa13.75□□□□□ -0.21
CCDC90B-205ENST00000525916 ABLIM3O94929 683 aa13.75□□□□□ -0.21
CCDC90B-205ENST00000525916 BAG4O95429 457 aaKnown RBP13.75□□□□□ -0.21
CCDC90B-205ENST00000525916 SEC24AO95486 1093 aa13.75□□□□□ -0.21
CCDC90B-205ENST00000525916 PRKCBP05771 671 aa13.75□□□□□ -0.21
CCDC90B-205ENST00000525916 GJA1P17302 382 aa13.75□□□□□ -0.21
CCDC90B-205ENST00000525916 LIG1P18858 919 aa13.75□□□□□ -0.21
CCDC90B-205ENST00000525916 ARPP19P56211 112 aa13.75□□□□□ -0.21
CCDC90B-205ENST00000525916 SHC2P98077 582 aa13.75□□□□□ -0.21
CCDC90B-205ENST00000525916 SF3A2Q15428 464 aaKnown RBP13.75□□□□□ -0.21
CCDC90B-205ENST00000525916 CCDC6Q16204 474 aa13.75□□□□□ -0.21
CCDC90B-205ENST00000525916 UPP1Q16831 310 aa13.75□□□□□ -0.21
CCDC90B-205ENST00000525916 WDR44Q5JSH3 913 aa13.75□□□□□ -0.21
CCDC90B-205ENST00000525916 SLC8B1Q6J4K2 584 aa13.75□□□□□ -0.21
CCDC90B-205ENST00000525916 CEP68Q76N32 757 aa13.75□□□□□ -0.21
CCDC90B-205ENST00000525916 LONP2Q86WA8 852 aa13.75□□□□□ -0.21
CCDC90B-205ENST00000525916 SPEM1Q8N4L4 309 aa13.75□□□□□ -0.21
CCDC90B-205ENST00000525916 DEPDC1BQ8WUY9 529 aa13.75□□□□□ -0.21
CCDC90B-205ENST00000525916 BSNDQ8WZ55 320 aa13.75□□□□□ -0.21
CCDC90B-205ENST00000525916 SMARCD2Q92925 531 aa13.75□□□□□ -0.21
CCDC90B-205ENST00000525916 NAP1L4Q99733 375 aaKnown RBP13.75□□□□□ -0.21
CCDC90B-205ENST00000525916 CYP4F11Q9HBI6 524 aa13.75□□□□□ -0.21
CCDC90B-205ENST00000525916 RXFP3Q9NSD7 469 aa13.75□□□□□ -0.21
CCDC90B-205ENST00000525916 PDRG1Q9NUG6 133 aa13.75□□□□□ -0.21
CCDC90B-205ENST00000525916 C2orf42Q9NWW7 574 aa13.75□□□□□ -0.21
CCDC90B-205ENST00000525916 MYO16Q9Y6X6 1858 aa13.75□□□□□ -0.21
CCDC90B-205ENST00000525916 MYH11P35749 1972 aa13.74□□□□□ -0.21
CCDC90B-205ENST00000525916 ARNTLO00327 626 aa13.74□□□□□ -0.21
CCDC90B-205ENST00000525916 MOSPD3O75425 235 aa13.74□□□□□ -0.21
CCDC90B-205ENST00000525916 ATF2P15336 505 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms