RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 SMARCA1P28370 1054 aa5.68□□□□□ -1.5
CD44-220ENST00000525688 PCSK1P29120 753 aa5.68□□□□□ -1.5
CD44-220ENST00000525688 LONRF1Q17RB8 773 aa5.68□□□□□ -1.5
CD44-220ENST00000525688 PRAMEF14Q5SWL7 426 aa5.68□□□□□ -1.5
CD44-220ENST00000525688 C10orf62Q5T681 223 aaPredicted RBP5.68□□□□□ -1.5
CD44-220ENST00000525688 MCTP1Q6DN14 999 aa5.68□□□□□ -1.5
CD44-220ENST00000525688 GPR155Q7Z3F1 870 aa5.68□□□□□ -1.5
CD44-220ENST00000525688 RALYLQ86SE5 291 aaKnown RBP5.68□□□□□ -1.5
CD44-220ENST00000525688 SRLQ86TD4 932 aa5.68□□□□□ -1.5
CD44-220ENST00000525688 DPP9Q86TI2 863 aa5.68□□□□□ -1.5
CD44-220ENST00000525688 COL23A1Q86Y22 540 aaPredicted RBP5.68□□□□□ -1.5
CD44-220ENST00000525688 FAM90A1Q86YD7 464 aa5.68□□□□□ -1.5
CD44-220ENST00000525688 CMTM4Q8IZR5 234 aa5.68□□□□□ -1.5
CD44-220ENST00000525688 ANKRD53Q8N9V6 530 aa5.68□□□□□ -1.5
CD44-220ENST00000525688 LINC01356Q8N9X3 169 aa5.68□□□□□ -1.5
CD44-220ENST00000525688 TP53I13Q8NBR0 393 aaPredicted RBP5.68□□□□□ -1.5
CD44-220ENST00000525688 REPS2Q8NFH8 660 aa5.68□□□□□ -1.5
CD44-220ENST00000525688 IL31RAQ8NI17 732 aa5.68□□□□□ -1.5
CD44-220ENST00000525688 CFHR4Q92496 578 aa5.68□□□□□ -1.5
CD44-220ENST00000525688 RABGGTAQ92696 567 aa5.68□□□□□ -1.5
CD44-220ENST00000525688 NT5C1BQ96P26 610 aa5.68□□□□□ -1.5
CD44-220ENST00000525688 GPHA2Q96T91 129 aa5.68□□□□□ -1.5
CD44-220ENST00000525688 LRRC27Q9C0I9 530 aa5.68□□□□□ -1.5
CD44-220ENST00000525688 LDAHQ9H6V9 325 aa5.68□□□□□ -1.5
CD44-220ENST00000525688 MSL2Q9HCI7 577 aa5.68□□□□□ -1.5
CD44-220ENST00000525688 SIDT1Q9NXL6 827 aaKnown RBP5.68□□□□□ -1.5
CD44-220ENST00000525688 RTEL1Q9NZ71 1219 aa5.68□□□□□ -1.5
CD44-220ENST00000525688 MOCS1Q9NZB8 636 aa5.68□□□□□ -1.5
CD44-220ENST00000525688 FEZ2Q9UHY8 353 aaPredicted RBP5.68□□□□□ -1.5
CD44-220ENST00000525688 LZTS1Q9Y250 596 aa5.68□□□□□ -1.5
CD44-220ENST00000525688 SLC4A7Q9Y6M7 1214 aa5.68□□□□□ -1.5
CD44-220ENST00000525688 GOLGA3Q08378 1498 aa5.68□□□□□ -1.5
CD44-220ENST00000525688 UHRF1BP1LA0JNW5 1464 aa5.67□□□□□ -1.5
CD44-220ENST00000525688 ISM1B1AKI9 464 aa5.67□□□□□ -1.5
CD44-220ENST00000525688 MYO1FO00160 1098 aa5.67□□□□□ -1.5
CD44-220ENST00000525688 FOXN3O00409 490 aaPredicted RBP5.67□□□□□ -1.5
CD44-220ENST00000525688 NPHP1O15259 732 aa5.67□□□□□ -1.5
CD44-220ENST00000525688 LDHCP07864 332 aa5.67□□□□□ -1.5
CD44-220ENST00000525688 MYL3P08590 195 aa5.67□□□□□ -1.5
CD44-220ENST00000525688 FAM163BP0C2L3 166 aa5.67□□□□□ -1.5
CD44-220ENST00000525688 C1QTNF9P0C862 333 aa5.67□□□□□ -1.5
CD44-220ENST00000525688 PRDX5P30044 214 aa5.67□□□□□ -1.5
CD44-220ENST00000525688 PTPN7P35236 360 aa5.67□□□□□ -1.5
CD44-220ENST00000525688 FLT3LGP49771 235 aa5.67□□□□□ -1.5
CD44-220ENST00000525688 AFF3P51826 1226 aaKnown RBP5.67□□□□□ -1.5
CD44-220ENST00000525688 LINC00310P59036 64 aa5.67□□□□□ -1.5
CD44-220ENST00000525688 FLYWCH1Q4VC44 716 aa5.67□□□□□ -1.5
CD44-220ENST00000525688 INO80DQ53TQ3 878 aaPredicted RBP5.67□□□□□ -1.5
CD44-220ENST00000525688 DACT2Q5SW24 774 aa5.67□□□□□ -1.5
CD44-220ENST00000525688 KRT40Q6A162 431 aa5.67□□□□□ -1.5
CD44-220ENST00000525688 OTUD7BQ6GQQ9 843 aa5.67□□□□□ -1.5
CD44-220ENST00000525688 PLXDC1Q8IUK5 500 aa5.67□□□□□ -1.5
CD44-220ENST00000525688 TMEM151BQ8IW70 566 aa5.67□□□□□ -1.5
CD44-220ENST00000525688 ADGRG2Q8IZP9 1017 aa5.67□□□□□ -1.5
CD44-220ENST00000525688 DCBLD1Q8N8Z6 715 aa5.67□□□□□ -1.5
CD44-220ENST00000525688 NEUROD6Q96NK8 337 aa5.67□□□□□ -1.5
CD44-220ENST00000525688 TBCBQ99426 244 aa5.67□□□□□ -1.5
CD44-220ENST00000525688 CDC5LQ99459 802 aaKnown RBP5.67□□□□□ -1.5
CD44-220ENST00000525688 APOL5Q9BWW9 433 aa5.67□□□□□ -1.5
CD44-220ENST00000525688 RSAD1Q9HA92 442 aa5.67□□□□□ -1.5
CD44-220ENST00000525688 PUF60Q9UHX1 559 aaKnown RBP5.67□□□□□ -1.5
CD44-220ENST00000525688 DAAM1Q9Y4D1 1078 aa5.67□□□□□ -1.5
CD44-220ENST00000525688 UACAQ9BZF9 1416 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 A0A1B0GTL3 188 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 A0A1W2PPL8 197 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 MROH6A6NGR9 719 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 RASA4BC9J798 803 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 F2RL2O00254 374 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 WNT10BO00744 389 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 RASA4O43374 803 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 FPR1P21462 350 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 CASRP41180 1078 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 PIK3CBP42338 1070 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 GZMKP49863 264 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 CASP5P51878 434 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 APBA1Q02410 837 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 KCTD2Q14681 263 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 KRT72Q14CN4 511 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 ACAP1Q15027 740 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 KCNA10Q16322 511 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 RNF151Q2KHN1 245 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 L1TD1Q5T7N2 865 aaKnown RBP5.66□□□□□ -1.5
CD44-220ENST00000525688 EMC10Q5UCC4 262 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 ADGRE4PQ86SQ3 457 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 KBTBD2Q8IY47 623 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 OR5M3Q8NGP4 307 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 OR14K1Q8NGZ2 314 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 MDM1Q8TC05 714 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 BRIX1Q8TDN6 353 aaKnown RBP5.66□□□□□ -1.5
CD44-220ENST00000525688 BORCS6Q96GS4 357 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 ZC3H10Q96K80 434 aaKnown RBP5.66□□□□□ -1.5
CD44-220ENST00000525688 RPL10LQ96L21 214 aaKnown RBP5.66□□□□□ -1.5
CD44-220ENST00000525688 MRGPRX1Q96LB2 322 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 SGCZQ96LD1 299 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 CCDC138Q96M89 665 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 KCNH6Q9H252 994 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 MRPL46Q9H2W6 279 aaKnown RBP5.66□□□□□ -1.5
CD44-220ENST00000525688 SARS2Q9NP81 518 aaKnown RBP5.66□□□□□ -1.5
CD44-220ENST00000525688 PLCB1Q9NQ66 1216 aa5.66□□□□□ -1.5
CD44-220ENST00000525688 NR2E1Q9Y466 385 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms