RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 SV2CQ496J9 727 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 ZBTB41Q5SVQ8 909 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 ZNF658Q5TYW1 1059 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 FAM171A1Q5VUB5 890 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 SPATA1Q5VX52 437 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 LLGL2Q6P1M3 1020 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 DSTYKQ6XUX3 929 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 ANKS3Q6ZW76 656 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 C12orf56Q8IXR9 622 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 ELOA2Q8IYF1 753 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 GPR65Q8IYL9 337 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 GUF1Q8N442 669 aaKnown RBP5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 KIAA0895Q8NCT3 520 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 GLIS3Q8NEA6 775 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 APPL2Q8NEU8 664 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 ENGASEQ8NFI3 743 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 BCL7CQ8WUZ0 217 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 RIN2Q8WYP3 895 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 RABGGTAQ92696 567 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 CASP10Q92851 521 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 C18orf25Q96B23 403 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 ZMAT2Q96NC0 199 aaKnown RBP5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 PAAF1Q9BRP4 392 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 TTPALQ9BTX7 342 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 HAPLN2Q9GZV7 340 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 GOLGA2P5Q9HBQ8 144 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 DZANK1Q9NVP4 752 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 CACNG4Q9UBN1 327 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 TUBGCP4Q9UGJ1 667 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 ITGA11Q9UKX5 1188 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 IRAK3Q9Y616 596 aa5.85□□□□□ -1.47
HMGB1P40-201ENST00000525121 FNDC1Q4ZHG4 1894 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 NLRC5Q86WI3 1866 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 HIDE1A8MVS5 230 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 SYN3O14994 580 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 PER2O15055 1255 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 CLIC2O15247 247 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 TGFB1I1O43294 461 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 PHACTR2O75167 634 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 GADD45BO75293 160 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 GLUD1P00367 558 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 NR3C1P04150 777 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 ADRB2P07550 413 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 KRT19P08727 400 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 DLATP10515 647 aaKnown RBP5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 ODC1P11926 461 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 KRT13P13646 458 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 HOXB8P17481 243 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 TNNI1P19237 187 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 NR2F2P24468 414 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 LRPAP1P30533 357 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 TAF6P49848 677 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 AP3M2P53677 418 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 DSG1Q02413 1049 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 YWHAHQ04917 246 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 SOX4Q06945 474 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 MYO1EQ12965 1108 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 CAMK1Q14012 370 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 MYBPC2Q14324 1141 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 PSMD6Q15008 389 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 NAB2Q15742 525 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 PSMD5Q16401 504 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 DUOXA2Q1HG44 320 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 LIN9Q5TKA1 542 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 CEP135Q66GS9 1140 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 ZNF280DQ6N043 979 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 CES5AQ6NT32 575 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 CLEC17AQ6ZS10 378 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 ADGRD2Q7Z7M1 963 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 METTL23Q86XA0 190 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 CBWD2Q8IUF1 395 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 WDR49Q8IV35 697 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 RDH13Q8NBN7 331 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 AUTS2Q8WXX7 1259 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 PIK3R5Q8WYR1 880 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 OXCT2Q9BYC2 517 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 GPR62Q9BZJ7 368 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 NUP62CLQ9H1M0 184 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 IKZF4Q9H2S9 585 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 PDE11AQ9HCR9 933 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 DPP3Q9NY33 737 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 FNIP2Q9P278 1114 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 CD207Q9UJ71 328 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 DSEQ9UL01 958 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 PCDHB8Q9UN66 801 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 MAPK8IP1Q9UQF2 711 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 PCDHGC5Q9Y5F6 944 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 PCDHA5Q9Y5H7 936 aa5.84□□□□□ -1.47
HMGB1P40-201ENST00000525121 LAMA3Q16787 3333 aa5.84□□□□□ -1.48
HMGB1P40-201ENST00000525121 BICDL2A1A5D9 508 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 F8W810 466 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 H3BQ06 376 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 I3L4J1 428 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 CETN3O15182 167 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 LINC01565O15544 149 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 STX10O60499 249 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 CLASP2O75122 1294 aaKnown RBP5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 FGFR1OPO95684 399 aaKnown RBP5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 MBD3O95983 291 aa5.83□□□□□ -1.48
HMGB1P40-201ENST00000525121 C1RP00736 705 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms