RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 DDX11Q96FC9 970 aa8.33□□□□□ -1.08
NEDD8-203ENST00000524927 BBC3Q96PG8 261 aaPredicted RBP8.33□□□□□ -1.08
NEDD8-203ENST00000524927 NEK1Q96PY6 1258 aa8.33□□□□□ -1.08
NEDD8-203ENST00000524927 RXFP3Q9NSD7 469 aa8.33□□□□□ -1.08
NEDD8-203ENST00000524927 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.33□□□□□ -1.08
NEDD8-203ENST00000524927 ABCA12Q86UK0 2595 aa8.33□□□□□ -1.08
NEDD8-203ENST00000524927 ADAMTS20P59510 1910 aa8.33□□□□□ -1.08
NEDD8-203ENST00000524927 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.32□□□□□ -1.08
NEDD8-203ENST00000524927 C2CD4DB7Z1M9 353 aa8.32□□□□□ -1.08
NEDD8-203ENST00000524927 ARHGAP6O43182 974 aa8.32□□□□□ -1.08
NEDD8-203ENST00000524927 FOXD2O60548 495 aaPredicted RBP8.32□□□□□ -1.08
NEDD8-203ENST00000524927 NTRK1P04629 796 aa8.32□□□□□ -1.08
NEDD8-203ENST00000524927 ASGR2P07307 311 aa8.32□□□□□ -1.08
NEDD8-203ENST00000524927 SNRPB2P08579 225 aaKnown RBP8.32□□□□□ -1.08
NEDD8-203ENST00000524927 HMGB1P09429 215 aaKnown RBP8.32□□□□□ -1.08
NEDD8-203ENST00000524927 SP100P23497 879 aaPredicted RBP8.32□□□□□ -1.08
NEDD8-203ENST00000524927 HOXC12P31275 282 aa8.32□□□□□ -1.08
NEDD8-203ENST00000524927 STAT3P40763 770 aa8.32□□□□□ -1.08
NEDD8-203ENST00000524927 TMPOP42166 694 aaKnown RBP8.32□□□□□ -1.08
NEDD8-203ENST00000524927 SUMO1P63165 101 aaKnown RBP8.32□□□□□ -1.08
NEDD8-203ENST00000524927 RAB3GAP1Q15042 981 aa8.32□□□□□ -1.08
NEDD8-203ENST00000524927 FAM47CQ5HY64 1035 aa8.32□□□□□ -1.08
NEDD8-203ENST00000524927 SPTY2D1Q68D10 685 aaPredicted RBP8.32□□□□□ -1.08
NEDD8-203ENST00000524927 ATF7IPQ6VMQ6 1270 aa8.32□□□□□ -1.08
NEDD8-203ENST00000524927 ADGRD2Q7Z7M1 963 aa8.32□□□□□ -1.08
NEDD8-203ENST00000524927 ZDHHC14Q8IZN3 488 aa8.32□□□□□ -1.08
NEDD8-203ENST00000524927 ZNF655Q8N720 491 aaPredicted RBP8.32□□□□□ -1.08
NEDD8-203ENST00000524927 DAGLBQ8NCG7 672 aa8.32□□□□□ -1.08
NEDD8-203ENST00000524927 ATRIPQ8WXE1 791 aa8.32□□□□□ -1.08
NEDD8-203ENST00000524927 KISS1RQ969F8 398 aaPredicted RBP8.32□□□□□ -1.08
NEDD8-203ENST00000524927 CCDC140Q96MF4 163 aa8.32□□□□□ -1.08
NEDD8-203ENST00000524927 HDAC8Q9BY41 377 aa8.32□□□□□ -1.08
NEDD8-203ENST00000524927 KRTAP4-2Q9BYR5 136 aa8.32□□□□□ -1.08
NEDD8-203ENST00000524927 DUSP15Q9H1R2 295 aaPredicted RBP8.32□□□□□ -1.08
NEDD8-203ENST00000524927 S1PR5Q9H228 398 aa8.32□□□□□ -1.08
NEDD8-203ENST00000524927 ZSWIM5Q9P217 1185 aa8.32□□□□□ -1.08
NEDD8-203ENST00000524927 ADAMTS5Q9UNA0 930 aa8.32□□□□□ -1.08
NEDD8-203ENST00000524927 CACNA1IQ9P0X4 2223 aa8.31□□□□□ -1.08
NEDD8-203ENST00000524927 SSU72P8A0A1W2PR75 194 aa8.31□□□□□ -1.08
NEDD8-203ENST00000524927 H3BS24 57 aa8.31□□□□□ -1.08
NEDD8-203ENST00000524927 FLOT1O75955 427 aa8.31□□□□□ -1.08
NEDD8-203ENST00000524927 CEACAM5P06731 702 aa8.31□□□□□ -1.08
NEDD8-203ENST00000524927 CD3EP07766 207 aa8.31□□□□□ -1.08
NEDD8-203ENST00000524927 LDHCP07864 332 aa8.31□□□□□ -1.08
NEDD8-203ENST00000524927 LINC00271P0C7V0 271 aa8.31□□□□□ -1.08
NEDD8-203ENST00000524927 SRGAP2BP0DMP2 458 aa8.31□□□□□ -1.08
NEDD8-203ENST00000524927 PLA2G2AP14555 144 aa8.31□□□□□ -1.08
NEDD8-203ENST00000524927 ECI1P42126 302 aa8.31□□□□□ -1.08
NEDD8-203ENST00000524927 NOP2P46087 812 aaKnown RBP8.31□□□□□ -1.08
NEDD8-203ENST00000524927 PURAQ00577 322 aaKnown RBP8.31□□□□□ -1.08
NEDD8-203ENST00000524927 SF1Q15637 639 aaKnown RBP8.31□□□□□ -1.08
NEDD8-203ENST00000524927 NKPD1Q17RQ9 610 aa8.31□□□□□ -1.08
NEDD8-203ENST00000524927 TATDN1Q6P1N9 297 aa8.31□□□□□ -1.08
NEDD8-203ENST00000524927 CRTC3Q6UUV7 619 aa8.31□□□□□ -1.08
NEDD8-203ENST00000524927 TEX11Q8IYF3 940 aa8.31□□□□□ -1.08
NEDD8-203ENST00000524927 KCTD13Q8WZ19 329 aa8.31□□□□□ -1.08
NEDD8-203ENST00000524927 LPIN2Q92539 896 aa8.31□□□□□ -1.08
NEDD8-203ENST00000524927 TOP1MTQ969P6 601 aa8.31□□□□□ -1.08
NEDD8-203ENST00000524927 OSBP2Q969R2 916 aa8.31□□□□□ -1.08
NEDD8-203ENST00000524927 HSPA12BQ96MM6 686 aa8.31□□□□□ -1.08
NEDD8-203ENST00000524927 NECTIN4Q96NY8 510 aa8.31□□□□□ -1.08
NEDD8-203ENST00000524927 MTG1Q9BT17 334 aaPredicted RBP8.31□□□□□ -1.08
NEDD8-203ENST00000524927 MKNK2Q9HBH9 465 aa8.31□□□□□ -1.08
NEDD8-203ENST00000524927 DLGAP2Q9P1A6 1054 aa8.31□□□□□ -1.08
NEDD8-203ENST00000524927 FBXO4Q9UKT5 387 aa8.31□□□□□ -1.08
NEDD8-203ENST00000524927 PRKAB1Q9Y478 270 aa8.31□□□□□ -1.08
NEDD8-203ENST00000524927 ST14Q9Y5Y6 855 aa8.31□□□□□ -1.08
NEDD8-203ENST00000524927 U3KQE9 123 aa8.31□□□□□ -1.08
NEDD8-203ENST00000524927 LAMA5O15230 3695 aa8.31□□□□□ -1.08
NEDD8-203ENST00000524927 SPTAN1Q13813 2472 aaKnown RBP8.3□□□□□ -1.08
NEDD8-203ENST00000524927 TRIP12Q14669 1992 aaPredicted RBP8.3□□□□□ -1.08
NEDD8-203ENST00000524927 DNAJC6O75061 913 aa8.3□□□□□ -1.08
NEDD8-203ENST00000524927 CTSKP43235 329 aa8.3□□□□□ -1.08
NEDD8-203ENST00000524927 PLCD1P51178 756 aa8.3□□□□□ -1.08
NEDD8-203ENST00000524927 LIMK1P53667 647 aa8.3□□□□□ -1.08
NEDD8-203ENST00000524927 CPSF6Q16630 551 aaKnown RBP eCLIP8.3□□□□□ -1.08
NEDD8-203ENST00000524927 LRRC24Q50LG9 513 aa8.3□□□□□ -1.08
NEDD8-203ENST00000524927 TMEM184AQ6ZMB5 413 aa8.3□□□□□ -1.08
NEDD8-203ENST00000524927 ZNF574Q6ZN55 896 aaPredicted RBP8.3□□□□□ -1.08
NEDD8-203ENST00000524927 MAML2Q8IZL2 1156 aaPredicted RBP8.3□□□□□ -1.08
NEDD8-203ENST00000524927 ZBTB44Q8NCP5 570 aa8.3□□□□□ -1.08
NEDD8-203ENST00000524927 MAP4K1Q92918 833 aa8.3□□□□□ -1.08
NEDD8-203ENST00000524927 UBE2FQ969M7 185 aa8.3□□□□□ -1.08
NEDD8-203ENST00000524927 IL17RAQ96F46 866 aa8.3□□□□□ -1.08
NEDD8-203ENST00000524927 TCTN2Q96GX1 697 aa8.3□□□□□ -1.08
NEDD8-203ENST00000524927 NCOA5Q9HCD5 579 aaKnown RBP8.3□□□□□ -1.08
NEDD8-203ENST00000524927 GPR108Q9NPR9 543 aa8.3□□□□□ -1.08
NEDD8-203ENST00000524927 CYP26B1Q9NR63 512 aa8.3□□□□□ -1.08
NEDD8-203ENST00000524927 IFT57Q9NWB7 429 aa8.3□□□□□ -1.08
NEDD8-203ENST00000524927 PLAGL2Q9UPG8 496 aa8.3□□□□□ -1.08
NEDD8-203ENST00000524927 WASF3Q9UPY6 502 aa8.3□□□□□ -1.08
NEDD8-203ENST00000524927 PLAAQ9Y263 795 aa8.3□□□□□ -1.08
NEDD8-203ENST00000524927 PDS5AQ29RF7 1337 aaKnown RBP8.29□□□□□ -1.08
NEDD8-203ENST00000524927 KALRNO60229 2985 aa8.29□□□□□ -1.08
NEDD8-203ENST00000524927 ELL2O00472 640 aaPredicted RBP8.29□□□□□ -1.08
NEDD8-203ENST00000524927 PLD2O14939 933 aa8.29□□□□□ -1.08
NEDD8-203ENST00000524927 DLX3O60479 287 aa8.29□□□□□ -1.08
NEDD8-203ENST00000524927 PAPLNO95428 1278 aa8.29□□□□□ -1.08
NEDD8-203ENST00000524927 CPP00450 1065 aa8.29□□□□□ -1.08
NEDD8-203ENST00000524927 CAPNS1P04632 268 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms