RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 GRIK3Q13003 919 aa17.09■□□□□ 0.33
TSPAN4-213ENST00000524895 TRPC3Q13507 836 aa17.09■□□□□ 0.33
TSPAN4-213ENST00000524895 NCOA4Q13772 614 aa17.09■□□□□ 0.33
TSPAN4-213ENST00000524895 EPC2Q52LR7 807 aa17.09■□□□□ 0.33
TSPAN4-213ENST00000524895 SPECC1LQ69YQ0 1117 aa17.09■□□□□ 0.33
TSPAN4-213ENST00000524895 ZNF365Q70YC5 407 aa17.09■□□□□ 0.33
TSPAN4-213ENST00000524895 C16orf59Q7L2K0 433 aa17.09■□□□□ 0.33
TSPAN4-213ENST00000524895 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.09■□□□□ 0.33
TSPAN4-213ENST00000524895 DRC7Q8IY82 874 aa17.09■□□□□ 0.33
TSPAN4-213ENST00000524895 C1orf127Q8N9H9 656 aa17.09■□□□□ 0.33
TSPAN4-213ENST00000524895 GSTCDQ8NEC7 633 aa17.09■□□□□ 0.33
TSPAN4-213ENST00000524895 LSM14BQ9BX40 385 aaKnown RBP17.09■□□□□ 0.33
TSPAN4-213ENST00000524895 INTS2Q9H0H0 1204 aaKnown RBP17.09■□□□□ 0.33
TSPAN4-213ENST00000524895 RAB20Q9NX57 234 aa17.09■□□□□ 0.33
TSPAN4-213ENST00000524895 PLAGL2Q9UPG8 496 aa17.09■□□□□ 0.33
TSPAN4-213ENST00000524895 COQ4Q9Y3A0 265 aa17.09■□□□□ 0.33
TSPAN4-213ENST00000524895 INPPL1O15357 1258 aa17.08■□□□□ 0.32
TSPAN4-213ENST00000524895 UPP2O95045 317 aa17.08■□□□□ 0.32
TSPAN4-213ENST00000524895 CYP3A5P20815 502 aa17.08■□□□□ 0.32
TSPAN4-213ENST00000524895 PBX1P40424 430 aa17.08■□□□□ 0.32
TSPAN4-213ENST00000524895 KLK7P49862 253 aa17.08■□□□□ 0.32
TSPAN4-213ENST00000524895 AFF1P51825 1210 aaKnown RBP17.08■□□□□ 0.32
TSPAN4-213ENST00000524895 GUCY2FP51841 1108 aa17.08■□□□□ 0.32
TSPAN4-213ENST00000524895 EPHB4P54760 987 aa17.08■□□□□ 0.32
TSPAN4-213ENST00000524895 ZBTB6Q15916 424 aa17.08■□□□□ 0.32
TSPAN4-213ENST00000524895 NOMO2Q5JPE7 1267 aa17.08■□□□□ 0.32
TSPAN4-213ENST00000524895 TRIM65Q6PJ69 517 aa17.08■□□□□ 0.32
TSPAN4-213ENST00000524895 TMC6Q7Z403 805 aa17.08■□□□□ 0.32
TSPAN4-213ENST00000524895 CCDC150Q8NCX0 1101 aa17.08■□□□□ 0.32
TSPAN4-213ENST00000524895 EHBP1Q8NDI1 1231 aa17.08■□□□□ 0.32
TSPAN4-213ENST00000524895 NEK11Q8NG66 645 aa17.08■□□□□ 0.32
TSPAN4-213ENST00000524895 RSPH1Q8WYR4 309 aa17.08■□□□□ 0.32
TSPAN4-213ENST00000524895 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.08■□□□□ 0.32
TSPAN4-213ENST00000524895 IMPG2Q9BZV3 1241 aa17.08■□□□□ 0.32
TSPAN4-213ENST00000524895 FAM207AQ9NSI2 230 aaPredicted RBP17.08■□□□□ 0.32
TSPAN4-213ENST00000524895 SIK3Q9Y2K2 1263 aa17.08■□□□□ 0.32
TSPAN4-213ENST00000524895 ITIH6Q6UXX5 1313 aa17.07■□□□□ 0.32
TSPAN4-213ENST00000524895 VNN1O95497 513 aa17.07■□□□□ 0.32
TSPAN4-213ENST00000524895 SLC9A1P19634 815 aa17.07■□□□□ 0.32
TSPAN4-213ENST00000524895 PON1P27169 355 aa17.07■□□□□ 0.32
TSPAN4-213ENST00000524895 POLR2BP30876 1174 aaKnown RBP17.07■□□□□ 0.32
TSPAN4-213ENST00000524895 DEFB103AP81534 67 aa17.07■□□□□ 0.32
TSPAN4-213ENST00000524895 RBP5P82980 135 aa17.07■□□□□ 0.32
TSPAN4-213ENST00000524895 RNASELQ05823 741 aaKnown RBP17.07■□□□□ 0.32
TSPAN4-213ENST00000524895 KCNMA1Q12791 1236 aa17.07■□□□□ 0.32
TSPAN4-213ENST00000524895 TMEM240Q5SV17 173 aa17.07■□□□□ 0.32
TSPAN4-213ENST00000524895 CRIPAKQ8N1N5 446 aa17.07■□□□□ 0.32
TSPAN4-213ENST00000524895 SEMA4DQ92854 862 aa17.07■□□□□ 0.32
TSPAN4-213ENST00000524895 MRPL9Q9BYD2 267 aaKnown RBP17.07■□□□□ 0.32
TSPAN4-213ENST00000524895 MTIF3Q9H2K0 278 aaKnown RBP17.07■□□□□ 0.32
TSPAN4-213ENST00000524895 MIOSQ9NXC5 875 aa17.07■□□□□ 0.32
TSPAN4-213ENST00000524895 KANSL3Q9P2N6 904 aa17.07■□□□□ 0.32
TSPAN4-213ENST00000524895 TTC3P53804 2025 aa17.06■□□□□ 0.32
TSPAN4-213ENST00000524895 TBKBP1A7MCY6 615 aa17.06■□□□□ 0.32
TSPAN4-213ENST00000524895 TRIM21P19474 475 aaKnown RBP17.06■□□□□ 0.32
TSPAN4-213ENST00000524895 GATMP50440 423 aa17.06■□□□□ 0.32
TSPAN4-213ENST00000524895 SOX4Q06945 474 aaPredicted RBP17.06■□□□□ 0.32
TSPAN4-213ENST00000524895 ZNF699Q32M78 642 aa17.06■□□□□ 0.32
TSPAN4-213ENST00000524895 WDR44Q5JSH3 913 aa17.06■□□□□ 0.32
TSPAN4-213ENST00000524895 TOP1MTQ969P6 601 aa17.06■□□□□ 0.32
TSPAN4-213ENST00000524895 GOLGA2P5Q9HBQ8 144 aa17.06■□□□□ 0.32
TSPAN4-213ENST00000524895 PLCB1Q9NQ66 1216 aa17.06■□□□□ 0.32
TSPAN4-213ENST00000524895 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.06■□□□□ 0.326e-7■■■■■ 76.9
TSPAN4-213ENST00000524895 TBC1D13Q9NVG8 400 aa17.06■□□□□ 0.32
TSPAN4-213ENST00000524895 SIX4Q9UIU6 781 aa17.06■□□□□ 0.32
TSPAN4-213ENST00000524895 AGAP1Q9UPQ3 857 aa17.06■□□□□ 0.32
TSPAN4-213ENST00000524895 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.06■□□□□ 0.32
TSPAN4-213ENST00000524895 GOLGA6L6A8MZA4 724 aa17.05■□□□□ 0.32
TSPAN4-213ENST00000524895 ZC3H11AO75152 810 aaKnown RBP eCLIP17.05■□□□□ 0.32
TSPAN4-213ENST00000524895 CST3P01034 146 aaPredicted RBP17.05■□□□□ 0.32
TSPAN4-213ENST00000524895 MYL6P60660 151 aa17.05■□□□□ 0.32
TSPAN4-213ENST00000524895 LRMPQ12912 555 aa17.05■□□□□ 0.32
TSPAN4-213ENST00000524895 TUSC3Q13454 348 aa17.05■□□□□ 0.32
TSPAN4-213ENST00000524895 TRIM14Q14142 442 aa17.05■□□□□ 0.32
TSPAN4-213ENST00000524895 NAB2Q15742 525 aa17.05■□□□□ 0.32
TSPAN4-213ENST00000524895 SGSM1Q2NKQ1 1148 aa17.05■□□□□ 0.32
TSPAN4-213ENST00000524895 C9orf57Q5W0N0 161 aa17.05■□□□□ 0.32
TSPAN4-213ENST00000524895 FAM117BQ6P1L5 589 aa17.05■□□□□ 0.32
TSPAN4-213ENST00000524895 LRRC43Q8N309 656 aa17.05■□□□□ 0.32
TSPAN4-213ENST00000524895 TMEM130Q8N3G9 435 aa17.05■□□□□ 0.32
TSPAN4-213ENST00000524895 SPC24Q8NBT2 197 aa17.05■□□□□ 0.32
TSPAN4-213ENST00000524895 LMO3Q8TAP4 145 aa17.05■□□□□ 0.32
TSPAN4-213ENST00000524895 HERVK_113Q902F9 699 aa17.05■□□□□ 0.32
TSPAN4-213ENST00000524895 TAF4BQ92750 862 aa17.05■□□□□ 0.32
TSPAN4-213ENST00000524895 IQCDQ96DY2 449 aa17.05■□□□□ 0.32
TSPAN4-213ENST00000524895 ZNF560Q96MR9 790 aa17.05■□□□□ 0.32
TSPAN4-213ENST00000524895 NT5C1BQ96P26 610 aa17.05■□□□□ 0.32
TSPAN4-213ENST00000524895 CASD1Q96PB1 797 aa17.05■□□□□ 0.32
TSPAN4-213ENST00000524895 FAM193BQ96PV7 902 aaPredicted RBP17.05■□□□□ 0.32
TSPAN4-213ENST00000524895 PI4K2AQ9BTU6 479 aa17.05■□□□□ 0.32
TSPAN4-213ENST00000524895 NUP58Q9BVL2 599 aa17.05■□□□□ 0.32
TSPAN4-213ENST00000524895 APEX2Q9UBZ4 518 aa17.05■□□□□ 0.32
TSPAN4-213ENST00000524895 TRIP11Q15643 1979 aa17.05■□□□□ 0.32
TSPAN4-213ENST00000524895 TDRD15B5MCY1 1934 aaKnown RBP17.04■□□□□ 0.32
TSPAN4-213ENST00000524895 CASTOR2A6NHX0 329 aa17.04■□□□□ 0.32
TSPAN4-213ENST00000524895 LRRN2O75325 713 aa17.04■□□□□ 0.32
TSPAN4-213ENST00000524895 DGKIO75912 1065 aa17.04■□□□□ 0.32
TSPAN4-213ENST00000524895 ASS1P00966 412 aaKnown RBP17.04■□□□□ 0.32
TSPAN4-213ENST00000524895 TPM1P09493 284 aa17.04■□□□□ 0.32
TSPAN4-213ENST00000524895 LRPAP1P30533 357 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms