RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 BEX3Q00994 111 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 PRKCZQ05513 592 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 PTPN11Q06124 597 aaPredicted RBP10.69□□□□□ -0.7
VPS13B-212ENST00000524330 TCEAL1Q15170 157 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 RPS6KA1Q15418 735 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 AMHR2Q16671 573 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 KIZQ2M2Z5 673 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 CFAP221Q4G0U5 840 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 LMBRD2Q68DH5 695 aaPredicted RBP10.69□□□□□ -0.7
VPS13B-212ENST00000524330 PEX26Q7Z412 305 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 GPIHBP1Q8IV16 184 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 GPR161Q8N6U8 529 aaKnown RBP10.69□□□□□ -0.7
VPS13B-212ENST00000524330 BEST2Q8NFU1 509 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 LNX1Q8TBB1 728 aaPredicted RBP10.69□□□□□ -0.7
VPS13B-212ENST00000524330 EPS8L1Q8TE68 723 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 TRIB2Q92519 343 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 TATDN2Q93075 761 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 ZNF668Q96K58 619 aaPredicted RBP10.69□□□□□ -0.7
VPS13B-212ENST00000524330 PBKQ96KB5 322 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 PPP1R16BQ96T49 567 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 SEZ6LQ9BYH1 1024 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 MTMR12Q9C0I1 747 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 ISCUQ9H1K1 167 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 ADAMTS10Q9H324 1103 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 MINDY3Q9H8M7 445 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 CYP3A43Q9HB55 503 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 XPNPEP3Q9NQH7 507 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 UVRAGQ9P2Y5 699 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 HDAC6Q9UBN7 1215 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 SRRDQ9UH36 339 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 AMFRQ9UKV5 643 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 NENFQ9UMX5 172 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 SNX12Q9UMY4 172 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 GINS2Q9Y248 185 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 A0A0U1RQJ8 604 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 GRID2IPA4D2P6 1211 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 LACTBL1A8MY62 500 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 GPR25O00155 361 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 TLR3O15455 904 aaKnown RBP10.68□□□□□ -0.7
VPS13B-212ENST00000524330 ADCY6O43306 1168 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 AOC2O75106 756 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 GPR32O75388 356 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 PALMO75781 387 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 SGPL1O95470 568 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 VNN1O95497 513 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 NPTXRO95502 500 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 CD4P01730 458 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 FTLP02792 175 aaPredicted RBP10.68□□□□□ -0.7
VPS13B-212ENST00000524330 ATP1A1P05023 1023 aaKnown RBP10.68□□□□□ -0.7
VPS13B-212ENST00000524330 EDN1P05305 212 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 PNMA6AP0CW24 399 aaPredicted RBP10.68□□□□□ -0.7
VPS13B-212ENST00000524330 CXCL8P10145 99 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 CST5P28325 142 aaPredicted RBP10.68□□□□□ -0.7
VPS13B-212ENST00000524330 GNA15P30679 374 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 NSFP46459 744 aaKnown RBP10.68□□□□□ -0.7
VPS13B-212ENST00000524330 HADHBP55084 474 aaKnown RBP10.68□□□□□ -0.7
VPS13B-212ENST00000524330 TNNC1P63316 161 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 SEZ6Q53EL9 994 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 FAM47CQ5HY64 1035 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 ZBTB41Q5SVQ8 909 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 TEX35Q5T0J7 233 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 ACAD10Q6JQN1 1059 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 SESTD1Q86VW0 696 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 RBBP8NLQ8NC74 664 aaPredicted RBP10.68□□□□□ -0.7
VPS13B-212ENST00000524330 OR5B17Q8NGF7 314 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 PXYLP1Q8TE99 480 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 DNAJB3Q8WWF6 145 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 ATRIPQ8WXE1 791 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 CPB2Q96IY4 423 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 VCPIP1Q96JH7 1222 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 NAP1L3Q99457 506 aaPredicted RBP10.68□□□□□ -0.7
VPS13B-212ENST00000524330 SYT11Q9BT88 431 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 PI4K2AQ9BTU6 479 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 PLVAPQ9BX97 442 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 CELF4Q9BZC1 486 aaKnown RBP10.68□□□□□ -0.7
VPS13B-212ENST00000524330 CTTNBP2NLQ9P2B4 639 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 NOCTQ9UK39 431 aaKnown RBP10.68□□□□□ -0.7
VPS13B-212ENST00000524330 GABRQQ9UN88 632 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 TRPV2Q9Y5S1 764 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 DUSP10Q9Y6W6 482 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 DOCK3Q8IZD9 2030 aa10.68□□□□□ -0.7
VPS13B-212ENST00000524330 TMCO5BA8MYB1 307 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 MIF4GDA9UHW6 222 aaKnown RBP10.67□□□□□ -0.7
VPS13B-212ENST00000524330 ENC1O14682 589 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 THAP12O43422 761 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 ERLIN1O75477 346 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 TADA3O75528 432 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 LSM8O95777 96 aaKnown RBP10.67□□□□□ -0.7
VPS13B-212ENST00000524330 STAU1O95793 577 aaKnown RBP10.67□□□□□ -0.7
VPS13B-212ENST00000524330 PRKAR2AP13861 404 aaKnown RBP10.67□□□□□ -0.7
VPS13B-212ENST00000524330 ABCB4P21439 1286 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 MYL6P60660 151 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 ADAM17P78536 824 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 MRPS6P82932 125 aaKnown RBP10.67□□□□□ -0.7
VPS13B-212ENST00000524330 AMPD2Q01433 879 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 ITIH3Q06033 890 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 CACNB2Q08289 660 aaPredicted RBP10.67□□□□□ -0.7
VPS13B-212ENST00000524330 SNX17Q15036 470 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 CLEC16AQ2KHT3 1053 aa10.67□□□□□ -0.7
VPS13B-212ENST00000524330 TAF3Q5VWG9 929 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms