RNA–Protein interactions for RNA: ENST00000523611.1

SNX18P27-201, Transcript of sorting nexin 18 pseudogene 27, humanhuman

BASIC

Gene SNX18P27, Length 779 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18P27-201ENST00000523611 CASD1Q96PB1 797 aa8.19□□□□□ -1.1
SNX18P27-201ENST00000523611 PPP1R10Q96QC0 940 aaKnown RBP8.19□□□□□ -1.1
SNX18P27-201ENST00000523611 TUBGCP2Q9BSJ2 902 aa8.19□□□□□ -1.1
SNX18P27-201ENST00000523611 RBSNQ9H1K0 784 aa8.19□□□□□ -1.1
SNX18P27-201ENST00000523611 VPS16Q9H269 839 aa8.19□□□□□ -1.1
SNX18P27-201ENST00000523611 TBC1D13Q9NVG8 400 aa8.19□□□□□ -1.1
SNX18P27-201ENST00000523611 INTS13Q9NVM9 706 aa8.19□□□□□ -1.1
SNX18P27-201ENST00000523611 MTMR10Q9NXD2 777 aa8.19□□□□□ -1.1
SNX18P27-201ENST00000523611 CACNG4Q9UBN1 327 aa8.19□□□□□ -1.1
SNX18P27-201ENST00000523611 R3HCC1Q9Y3T6 440 aaKnown RBP8.19□□□□□ -1.1
SNX18P27-201ENST00000523611 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.19□□□□□ -1.1
SNX18P27-201ENST00000523611 STX10O60499 249 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 SERPINC1P01008 464 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 AFPP02771 609 aaKnown RBP8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 ITGB3P05106 788 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 ZNF18P17022 549 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 BMP8BP34820 402 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 PIK3CAP42336 1068 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 OR1G1P47890 313 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 COPB1P53618 953 aaKnown RBP8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 MARSP56192 900 aaKnown RBP8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 MYL7Q01449 175 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 SOX4Q06945 474 aaPredicted RBP8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 PPP3CAQ08209 521 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 KCNH2Q12809 1159 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 TUSC3Q13454 348 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 KRT31Q15323 416 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 DUOXA2Q1HG44 320 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 XKR4Q5GH76 650 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 FAM109BQ6ICB4 259 aaPredicted RBP8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 ALKAL1Q6UXT8 129 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 NT5DC4Q86YG4 428 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 ZNF280BQ86YH2 543 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 CRIPAKQ8N1N5 446 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 FIBCD1Q8N539 461 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 GSTCDQ8NEC7 633 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 RSPH1Q8WYR4 309 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 RABGGTAQ92696 567 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 SLC35C1Q96A29 364 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 ZNF689Q96CS4 500 aaPredicted RBP8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 BORCS6Q96GS4 357 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 HSD3B7Q9H2F3 369 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 NRDE2Q9H7Z3 1164 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 RC3H2Q9HBD1 1191 aaKnown RBP8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 SLC38A7Q9NVC3 462 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 DPP3Q9NY33 737 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 KANSL3Q9P2N6 904 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 DNAJB4Q9UDY4 337 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 PRG3Q9Y2Y8 225 aaPredicted RBP8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 DERAQ9Y315 318 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 C2CD2Q9Y426 696 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 INSL6Q9Y581 213 aa8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 MRPL42Q9Y6G3 142 aaKnown RBP8.18□□□□□ -1.1
SNX18P27-201ENST00000523611 SCN1AP35498 2009 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 LCHNA4D1U4 455 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 PODXLO00592 558 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 PPEF2O14830 753 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 INPPL1O15357 1258 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 B4GALT3O60512 393 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 N4BP1O75113 896 aaKnown RBP8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 DDHD2O94830 711 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 MYOGP15173 224 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 POLR2BP30876 1174 aaKnown RBP8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 PBX3P40426 434 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 FMO5P49326 533 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 AP3M2P53677 418 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 HTRA4P83105 476 aaPredicted RBP8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 FANCCQ00597 558 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 ENPEPQ07075 957 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 TRPC3Q13507 836 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 FILIP1LQ4L180 1135 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 CBWD6Q4V339 395 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 VWA3BQ502W6 1294 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 CBWD3Q5JTY5 395 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 CBWD5Q5RIA9 395 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 C1orf220Q5T0J3 134 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 TDRD10Q5VZ19 366 aaKnown RBP8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 KRT39Q6A163 491 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 SV2AQ7L0J3 742 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 TRAPPC11Q7Z392 1133 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 C1orf127Q8N9H9 656 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 HASPINQ8TF76 798 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 ZNF516Q92618 1163 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 ZNF560Q96MR9 790 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 TSPAN18Q96SJ8 248 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 RAD9AQ99638 391 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 TMEM8AQ9HCN3 771 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 LIMA1Q9UHB6 759 aaKnown RBP8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 ITGA11Q9UKX5 1188 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 AGAP1Q9UPQ3 857 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 CACNA1AO00555 2505 aa8.17□□□□□ -1.1
SNX18P27-201ENST00000523611 TMEM265A0A087WTH1 108 aa8.16□□□□□ -1.1
SNX18P27-201ENST00000523611 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.16□□□□□ -1.1
SNX18P27-201ENST00000523611 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.16□□□□□ -1.1
SNX18P27-201ENST00000523611 A0A1W2PPC1 479 aa8.16□□□□□ -1.1
SNX18P27-201ENST00000523611 NT5C1B-RDH14C9J2C7 533 aa8.16□□□□□ -1.1
SNX18P27-201ENST00000523611 HLA-DRAP01903 254 aa8.16□□□□□ -1.1
SNX18P27-201ENST00000523611 C4BPAP04003 597 aaKnown RBP8.16□□□□□ -1.1
SNX18P27-201ENST00000523611 CA3P07451 260 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms