RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 M0R2N6 131 aa12.84□□□□□ -0.35
SDCBP-211ENST00000523441 LRP3O75074 770 aa12.84□□□□□ -0.35
SDCBP-211ENST00000523441 C1QTNF9P0C862 333 aa12.84□□□□□ -0.35
SDCBP-211ENST00000523441 PSMC3P17980 439 aa12.84□□□□□ -0.35
SDCBP-211ENST00000523441 FGFR3P22607 806 aa12.84□□□□□ -0.35
SDCBP-211ENST00000523441 ROR1Q01973 937 aa12.84□□□□□ -0.35
SDCBP-211ENST00000523441 TSGA10IPQ3SY00 556 aa12.84□□□□□ -0.35
SDCBP-211ENST00000523441 CYP4A22Q5TCH4 519 aa12.84□□□□□ -0.35
SDCBP-211ENST00000523441 MOXD1Q6UVY6 613 aa12.84□□□□□ -0.35
SDCBP-211ENST00000523441 LONP2Q86WA8 852 aa12.84□□□□□ -0.35
SDCBP-211ENST00000523441 ZBTB8OSQ8IWT0 167 aa12.84□□□□□ -0.35
SDCBP-211ENST00000523441 ZNF687Q8N1G0 1237 aa12.84□□□□□ -0.35
SDCBP-211ENST00000523441 FAM200AQ8TCP9 573 aa12.84□□□□□ -0.35
SDCBP-211ENST00000523441 ASB16Q96NS5 453 aa12.84□□□□□ -0.35
SDCBP-211ENST00000523441 POLD4Q9HCU8 107 aa12.84□□□□□ -0.35
SDCBP-211ENST00000523441 NCANO14594 1321 aa12.84□□□□□ -0.35
SDCBP-211ENST00000523441 NID2Q14112 1375 aa12.83□□□□□ -0.36
SDCBP-211ENST00000523441 N4BP3O15049 544 aa12.83□□□□□ -0.36
SDCBP-211ENST00000523441 DGAT1O75907 488 aa12.83□□□□□ -0.36
SDCBP-211ENST00000523441 SLITRK3O94933 977 aa12.83□□□□□ -0.36
SDCBP-211ENST00000523441 DEXIO95424 95 aa12.83□□□□□ -0.36
SDCBP-211ENST00000523441 BAG4O95429 457 aaKnown RBP12.83□□□□□ -0.36
SDCBP-211ENST00000523441 SEC24AO95486 1093 aa12.83□□□□□ -0.36
SDCBP-211ENST00000523441 CHRNB1P11230 501 aa12.83□□□□□ -0.36
SDCBP-211ENST00000523441 SPINK2P20155 84 aa12.83□□□□□ -0.36
SDCBP-211ENST00000523441 PMLP29590 882 aa12.83□□□□□ -0.36
SDCBP-211ENST00000523441 OSTNP61366 133 aa12.83□□□□□ -0.36
SDCBP-211ENST00000523441 PRPF4BQ13523 1007 aaKnown RBP12.83□□□□□ -0.36
SDCBP-211ENST00000523441 TEAD2Q15562 447 aa12.83□□□□□ -0.36
SDCBP-211ENST00000523441 NAB2Q15742 525 aa12.83□□□□□ -0.36
SDCBP-211ENST00000523441 NPY5RQ15761 445 aa12.83□□□□□ -0.36
SDCBP-211ENST00000523441 PRSS36Q5K4E3 855 aa12.83□□□□□ -0.36
SDCBP-211ENST00000523441 EEF1DP3Q658K8 133 aa12.83□□□□□ -0.36
SDCBP-211ENST00000523441 IFNLR1Q8IU57 520 aaPredicted RBP12.83□□□□□ -0.36
SDCBP-211ENST00000523441 ELMOD1Q8N336 334 aa12.83□□□□□ -0.36
SDCBP-211ENST00000523441 C3orf58Q8NDZ4 430 aa12.83□□□□□ -0.36
SDCBP-211ENST00000523441 ZSCAN18Q8TBC5 510 aaPredicted RBP12.83□□□□□ -0.36
SDCBP-211ENST00000523441 OXER1Q8TDS5 423 aa12.83□□□□□ -0.36
SDCBP-211ENST00000523441 DDX1Q92499 740 aaKnown RBP12.83□□□□□ -0.36
SDCBP-211ENST00000523441 SMARCD2Q92925 531 aa12.83□□□□□ -0.36
SDCBP-211ENST00000523441 ZFYVE19Q96K21 471 aa12.83□□□□□ -0.36
SDCBP-211ENST00000523441 ADPGKQ9BRR6 497 aa12.83□□□□□ -0.36
SDCBP-211ENST00000523441 PRMT7Q9NVM4 692 aaPredicted RBP12.83□□□□□ -0.36
SDCBP-211ENST00000523441 HEPACAM2A8MVW5 462 aa12.82□□□□□ -0.36
SDCBP-211ENST00000523441 ZNF197O14709 1029 aa12.82□□□□□ -0.36
SDCBP-211ENST00000523441 EDN1P05305 212 aa12.82□□□□□ -0.36
SDCBP-211ENST00000523441 ATP2B1P20020 1258 aa12.82□□□□□ -0.36
SDCBP-211ENST00000523441 TWF1Q12792 350 aa12.82□□□□□ -0.36
SDCBP-211ENST00000523441 FOXC1Q12948 553 aa12.82□□□□□ -0.36
SDCBP-211ENST00000523441 LRRC32Q14392 662 aa12.82□□□□□ -0.36
SDCBP-211ENST00000523441 PON2Q15165 354 aa12.82□□□□□ -0.36
SDCBP-211ENST00000523441 STPG1Q5TH74 334 aa12.82□□□□□ -0.36
SDCBP-211ENST00000523441 IQCEQ6IPM2 695 aa12.82□□□□□ -0.36
SDCBP-211ENST00000523441 PSAPL1Q6NUJ1 521 aa12.82□□□□□ -0.36
SDCBP-211ENST00000523441 ANKS3Q6ZW76 656 aa12.82□□□□□ -0.36
SDCBP-211ENST00000523441 MAP4K3Q8IVH8 894 aa12.82□□□□□ -0.36
SDCBP-211ENST00000523441 SPEM1Q8N4L4 309 aa12.82□□□□□ -0.36
SDCBP-211ENST00000523441 DAGLBQ8NCG7 672 aa12.82□□□□□ -0.36
SDCBP-211ENST00000523441 ZNF512Q96ME7 567 aaPredicted RBP12.82□□□□□ -0.36
SDCBP-211ENST00000523441 ZMIZ1Q9ULJ6 1067 aa12.82□□□□□ -0.36
SDCBP-211ENST00000523441 INSL5Q9Y5Q6 135 aa12.82□□□□□ -0.36
SDCBP-211ENST00000523441 SPAG17Q6Q759 2223 aa12.82□□□□□ -0.36
SDCBP-211ENST00000523441 FAM208BQ5VWN6 2430 aa12.82□□□□□ -0.36
SDCBP-211ENST00000523441 K7ESF4 209 aa12.81□□□□□ -0.36
SDCBP-211ENST00000523441 TRAPPC3O43617 180 aa12.81□□□□□ -0.36
SDCBP-211ENST00000523441 POU2F2P09086 479 aa12.81□□□□□ -0.36
SDCBP-211ENST00000523441 CCDC192P0DO97 292 aa12.81□□□□□ -0.36
SDCBP-211ENST00000523441 TXKP42681 527 aa12.81□□□□□ -0.36
SDCBP-211ENST00000523441 RARRES1P49788 294 aa12.81□□□□□ -0.36
SDCBP-211ENST00000523441 CDR1P51861 262 aa12.81□□□□□ -0.36
SDCBP-211ENST00000523441 FOSBP53539 338 aa12.81□□□□□ -0.36
SDCBP-211ENST00000523441 POU5F1BQ06416 359 aa12.81□□□□□ -0.36
SDCBP-211ENST00000523441 SPIRE1Q08AE8 756 aa12.81□□□□□ -0.36
SDCBP-211ENST00000523441 PTGDRQ13258 359 aa12.81□□□□□ -0.36
SDCBP-211ENST00000523441 EARS2Q5JPH6 523 aaKnown RBP12.81□□□□□ -0.36
SDCBP-211ENST00000523441 TCEAL6Q6IPX3 200 aa12.81□□□□□ -0.36
SDCBP-211ENST00000523441 TXNDC11Q6PKC3 985 aa12.81□□□□□ -0.36
SDCBP-211ENST00000523441 KBTBD6Q86V97 674 aa12.81□□□□□ -0.36
SDCBP-211ENST00000523441 ZNF461Q8TAF7 563 aa12.81□□□□□ -0.36
SDCBP-211ENST00000523441 TCEAL3Q969E4 200 aa12.81□□□□□ -0.36
SDCBP-211ENST00000523441 RSPRY1Q96DX4 576 aa12.81□□□□□ -0.36
SDCBP-211ENST00000523441 KIFC3Q9BVG8 833 aa12.81□□□□□ -0.36
SDCBP-211ENST00000523441 BACE2Q9Y5Z0 518 aa12.81□□□□□ -0.36
SDCBP-211ENST00000523441 EML5Q05BV3 1969 aa12.8□□□□□ -0.36
SDCBP-211ENST00000523441 ARHGEF37A1IGU5 675 aa12.8□□□□□ -0.36
SDCBP-211ENST00000523441 GIPC1O14908 333 aa12.8□□□□□ -0.36
SDCBP-211ENST00000523441 CDC45O75419 566 aa12.8□□□□□ -0.36
SDCBP-211ENST00000523441 KCNK5O95279 499 aa12.8□□□□□ -0.36
SDCBP-211ENST00000523441 PROS1P07225 676 aa12.8□□□□□ -0.36
SDCBP-211ENST00000523441 CPB1P15086 417 aa12.8□□□□□ -0.36
SDCBP-211ENST00000523441 GCFC2P16383 781 aaKnown RBP12.8□□□□□ -0.36
SDCBP-211ENST00000523441 SOX4Q06945 474 aaPredicted RBP12.8□□□□□ -0.36
SDCBP-211ENST00000523441 CTXN3Q4LDR2 81 aa12.8□□□□□ -0.36
SDCBP-211ENST00000523441 WDR44Q5JSH3 913 aa12.8□□□□□ -0.36
SDCBP-211ENST00000523441 STXBP5Q5T5C0 1151 aa12.8□□□□□ -0.36
SDCBP-211ENST00000523441 CD300LGQ6UXG3 332 aa12.8□□□□□ -0.36
SDCBP-211ENST00000523441 MFSD6LQ8IWD5 586 aa12.8□□□□□ -0.36
SDCBP-211ENST00000523441 SLFN12Q8IYM2 578 aa12.8□□□□□ -0.36
SDCBP-211ENST00000523441 BSNDQ8WZ55 320 aa12.8□□□□□ -0.36
SDCBP-211ENST00000523441 IER2Q9BTL4 223 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms