RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 GUCA1BQ9UMX6 200 aa7.43□□□□□ -1.22
CSMD1-211ENST00000523062 PCDHA13Q9Y5I0 950 aa7.43□□□□□ -1.22
CSMD1-211ENST00000523062 MRFAP1Q9Y605 127 aa7.43□□□□□ -1.22
CSMD1-211ENST00000523062 ATP8B3O60423 1300 aa7.43□□□□□ -1.22
CSMD1-211ENST00000523062 PLXNB2O15031 1838 aa7.43□□□□□ -1.22
CSMD1-211ENST00000523062 ZNF236Q9UL36 1845 aa7.43□□□□□ -1.22
CSMD1-211ENST00000523062 GOLGA8IPA6NC78 632 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 MANSC4A6NHS7 340 aaPredicted RBP7.42□□□□□ -1.22
CSMD1-211ENST00000523062 GOLGA8JA6NMD2 632 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 F8VZ95 297 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 ZNF263O14978 683 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 PJA2O43164 708 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 EXTL3O43909 919 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 ADCY3O60266 1144 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 HBP1O60381 514 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 TACC1O75410 805 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 GFPT2O94808 682 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 MARK3P27448 753 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 MAGEA1P43355 309 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 GCLMP48507 274 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 EFNA5P52803 228 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 CYP27A1Q02318 531 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 ARHGAP1Q07960 439 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 CYP24A1Q07973 514 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 PPP3CAQ08209 521 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 CAPSQ13938 189 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 MXD4Q14582 209 aaPredicted RBP7.42□□□□□ -1.22
CSMD1-211ENST00000523062 PLCB4Q15147 1175 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 SLC18A3Q16572 532 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 HSDL1Q3SXM5 330 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 EPC2Q52LR7 807 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 C1orf220Q5T0J3 134 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 C10orf76Q5T2E6 689 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 TAPT1Q6NXT6 567 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 SLC39A4Q6P5W5 647 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 MAMDC4Q6UXC1 1216 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 DPP9Q86TI2 863 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 NLRP8Q86W28 1048 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 TRIM50Q86XT4 487 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 RASAL3Q86YV0 1011 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 ZBTB8OSQ8IWT0 167 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 MSL3Q8N5Y2 521 aaKnown RBP7.42□□□□□ -1.22
CSMD1-211ENST00000523062 PPTC7Q8NI37 304 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 PLEKHO2Q8TD55 490 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 PSPC1Q8WXF1 523 aaKnown RBP7.42□□□□□ -1.22
CSMD1-211ENST00000523062 COPS5Q92905 334 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 SAAL1Q96ER3 474 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 MFSD14AQ96MC6 490 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 ALS2CR12Q96Q35 445 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 C2orf40Q9H1Z8 148 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 TMEM8AQ9HCN3 771 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 PDGFCQ9NRA1 345 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 APEX2Q9UBZ4 518 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 TRIM10Q9UDY6 481 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 DNAJC12Q9UKB3 198 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 AJAP1Q9UKB5 411 aaPredicted RBP7.42□□□□□ -1.22
CSMD1-211ENST00000523062 USP20Q9Y2K6 914 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 STYXL1Q9Y6J8 313 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 ADGRA2Q96PE1 1338 aa7.42□□□□□ -1.22
CSMD1-211ENST00000523062 SIP14410 1827 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 MCM3APO60318 1980 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 IGKV6-21A0A0C4DH24 114 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 ANO9A1A5B4 782 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 ZNF233A6NK53 670 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 LRRIQ3A6PVS8 624 aaPredicted RBP7.41□□□□□ -1.22
CSMD1-211ENST00000523062 K7ERI5 159 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 LDHAP00338 332 aaKnown RBP7.41□□□□□ -1.22
CSMD1-211ENST00000523062 ABL1P00519 1130 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 LGALS2P05162 132 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 SOX5P35711 763 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 ZNF157P51786 506 aaPredicted RBP7.41□□□□□ -1.22
CSMD1-211ENST00000523062 DLG4P78352 724 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 ARID5AQ03989 594 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 GFPT1Q06210 699 aaPredicted RBP7.41□□□□□ -1.22
CSMD1-211ENST00000523062 NCBP1Q09161 790 aaKnown RBP7.41□□□□□ -1.22
CSMD1-211ENST00000523062 IRF5Q13568 498 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 TFDP1Q14186 410 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 DRAP1Q14919 205 aaPredicted RBP7.41□□□□□ -1.22
CSMD1-211ENST00000523062 TAF1CQ15572 869 aaPredicted RBP7.41□□□□□ -1.22
CSMD1-211ENST00000523062 WHAMMP3Q1A5X7 153 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 ZNF484Q5JVG2 852 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 CST9Q5W186 159 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 CDCA2Q69YH5 1023 aaPredicted RBP7.41□□□□□ -1.22
CSMD1-211ENST00000523062 KRT39Q6A163 491 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 GJB7Q6PEY0 223 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 ZPBP2Q6X784 338 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 IRF2BP2Q7Z5L9 587 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 ZSWIM2Q8NEG5 633 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 TRIM58Q8NG06 486 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 LMO3Q8TAP4 145 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 PARD3BQ8TEW8 1205 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 MAML3Q96JK9 1138 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 PTPN18Q99952 460 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 FAM213AQ9BRX8 229 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.41□□□□□ -1.22
CSMD1-211ENST00000523062 CARD6Q9BX69 1037 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 LACRTQ9GZZ8 138 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 KATNBL1Q9H079 304 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 TMEM117Q9H0C3 514 aa7.41□□□□□ -1.22
CSMD1-211ENST00000523062 ERAP1Q9NZ08 941 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms