RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 C3orf58Q8NDZ4 430 aa10.31□□□□□ -0.76
SDC2-207ENST00000522911 DRC1Q96MC2 740 aa10.31□□□□□ -0.76
SDC2-207ENST00000522911 CCDC94Q9BW85 323 aaPredicted RBP10.31□□□□□ -0.76
SDC2-207ENST00000522911 MRPL4Q9BYD3 311 aaKnown RBP10.31□□□□□ -0.76
SDC2-207ENST00000522911 FOXQ1Q9C009 403 aa10.31□□□□□ -0.76
SDC2-207ENST00000522911 CDT1Q9H211 546 aa10.31□□□□□ -0.76
SDC2-207ENST00000522911 TRPV4Q9HBA0 871 aa10.31□□□□□ -0.76
SDC2-207ENST00000522911 LTB4R2Q9NPC1 389 aa10.31□□□□□ -0.76
SDC2-207ENST00000522911 DLL3Q9NYJ7 618 aa10.31□□□□□ -0.76
SDC2-207ENST00000522911 LRWD1Q9UFC0 647 aa10.31□□□□□ -0.76
SDC2-207ENST00000522911 GDAQ9Y2T3 454 aa10.31□□□□□ -0.76
SDC2-207ENST00000522911 R4GN57 208 aa10.31□□□□□ -0.76
SDC2-207ENST00000522911 CACNA1IQ9P0X4 2223 aa10.31□□□□□ -0.76
SDC2-207ENST00000522911 GPR179Q6PRD1 2367 aa10.31□□□□□ -0.76
SDC2-207ENST00000522911 CEP250Q9BV73 2442 aa10.31□□□□□ -0.76
SDC2-207ENST00000522911 WDR27A2RRH5 827 aa10.3□□□□□ -0.76
SDC2-207ENST00000522911 SHISA7A6NL88 538 aa10.3□□□□□ -0.76
SDC2-207ENST00000522911 H7C4K7 107 aa10.3□□□□□ -0.76
SDC2-207ENST00000522911 ZNF197O14709 1029 aa10.3□□□□□ -0.76
SDC2-207ENST00000522911 LAMTOR5O43504 91 aa10.3□□□□□ -0.76
SDC2-207ENST00000522911 KINO60870 393 aaKnown RBP10.3□□□□□ -0.76
SDC2-207ENST00000522911 LILRB5O75023 590 aa10.3□□□□□ -0.76
SDC2-207ENST00000522911 MYBP10242 640 aa10.3□□□□□ -0.76
SDC2-207ENST00000522911 PTPN2P17706 415 aa10.3□□□□□ -0.76
SDC2-207ENST00000522911 GUCY2CP25092 1073 aa10.3□□□□□ -0.76
SDC2-207ENST00000522911 CCT6AP40227 531 aaKnown RBP10.3□□□□□ -0.76
SDC2-207ENST00000522911 SOX4Q06945 474 aaPredicted RBP10.3□□□□□ -0.76
SDC2-207ENST00000522911 DMP1Q13316 513 aaPredicted RBP10.3□□□□□ -0.76
SDC2-207ENST00000522911 FZD5Q13467 585 aa10.3□□□□□ -0.76
SDC2-207ENST00000522911 SNW1Q13573 536 aaKnown RBP10.3□□□□□ -0.76
SDC2-207ENST00000522911 PUM1Q14671 1186 aaKnown RBP eCLIP10.3□□□□□ -0.76
SDC2-207ENST00000522911 ZNF174Q15697 407 aa10.3□□□□□ -0.76
SDC2-207ENST00000522911 TMEM132AQ24JP5 1023 aa10.3□□□□□ -0.76
SDC2-207ENST00000522911 PRSS36Q5K4E3 855 aa10.3□□□□□ -0.76
SDC2-207ENST00000522911 VARS2Q5ST30 1063 aaKnown RBP10.3□□□□□ -0.76
SDC2-207ENST00000522911 ZBTB41Q5SVQ8 909 aa10.3□□□□□ -0.76
SDC2-207ENST00000522911 HYIQ5T013 277 aa10.3□□□□□ -0.76
SDC2-207ENST00000522911 C1orf186Q6ZWK4 172 aa10.3□□□□□ -0.76
SDC2-207ENST00000522911 TAS1R3Q7RTX0 852 aa10.3□□□□□ -0.76
SDC2-207ENST00000522911 LEMD2Q8NC56 503 aa10.3□□□□□ -0.76
SDC2-207ENST00000522911 BEST2Q8NFU1 509 aa10.3□□□□□ -0.76
SDC2-207ENST00000522911 SPIRE2Q8WWL2 714 aa10.3□□□□□ -0.76
SDC2-207ENST00000522911 SUSD3Q96L08 255 aa10.3□□□□□ -0.76
SDC2-207ENST00000522911 ZSCAN31Q96LW9 406 aaPredicted RBP10.3□□□□□ -0.76
SDC2-207ENST00000522911 ZMAT2Q96NC0 199 aaKnown RBP10.3□□□□□ -0.76
SDC2-207ENST00000522911 TSPAN18Q96SJ8 248 aa10.3□□□□□ -0.76
SDC2-207ENST00000522911 PRMT8Q9NR22 394 aaPredicted RBP10.3□□□□□ -0.76
SDC2-207ENST00000522911 SH2B1Q9NRF2 756 aaPredicted RBP10.3□□□□□ -0.76
SDC2-207ENST00000522911 HCFC1R1Q9NWW0 138 aa10.3□□□□□ -0.76
SDC2-207ENST00000522911 KCND2Q9NZV8 630 aa10.3□□□□□ -0.76
SDC2-207ENST00000522911 NOL7Q9UMY1 257 aaKnown RBP10.3□□□□□ -0.76
SDC2-207ENST00000522911 KIAA1024Q9UPX6 916 aa10.3□□□□□ -0.76
SDC2-207ENST00000522911 DNM3Q9UQ16 869 aa10.3□□□□□ -0.76
SDC2-207ENST00000522911 MRPS17Q9Y2R5 130 aaKnown RBP10.3□□□□□ -0.76
SDC2-207ENST00000522911 MRPS23Q9Y3D9 190 aaKnown RBP10.3□□□□□ -0.76
SDC2-207ENST00000522911 MYH15Q9Y2K3 1946 aa10.3□□□□□ -0.76
SDC2-207ENST00000522911 FAM170BA6NMN3 283 aa10.29□□□□□ -0.76
SDC2-207ENST00000522911 TOM1L1O75674 476 aa10.29□□□□□ -0.76
SDC2-207ENST00000522911 SDHBP21912 280 aa10.29□□□□□ -0.76
SDC2-207ENST00000522911 PAX3P23760 479 aa10.29□□□□□ -0.76
SDC2-207ENST00000522911 FCARP24071 287 aa10.29□□□□□ -0.76
SDC2-207ENST00000522911 IGFBP6P24592 240 aaPredicted RBP10.29□□□□□ -0.76
SDC2-207ENST00000522911 MAPK7Q13164 816 aa10.29□□□□□ -0.76
SDC2-207ENST00000522911 SLC5A9Q2M3M2 681 aa10.29□□□□□ -0.76
SDC2-207ENST00000522911 ZNF568Q3ZCX4 644 aa10.29□□□□□ -0.76
SDC2-207ENST00000522911 GLRA4Q5JXX5 417 aa10.29□□□□□ -0.76
SDC2-207ENST00000522911 SPECC1Q5M775 1068 aa10.29□□□□□ -0.76
SDC2-207ENST00000522911 MPZL3Q6UWV2 235 aa10.29□□□□□ -0.76
SDC2-207ENST00000522911 ZPBP2Q6X784 338 aa10.29□□□□□ -0.76
SDC2-207ENST00000522911 ZNF852Q6ZMS4 543 aa10.29□□□□□ -0.76
SDC2-207ENST00000522911 CEP120Q8N960 986 aa10.29□□□□□ -0.76
SDC2-207ENST00000522911 KCNG4Q8TDN1 519 aa10.29□□□□□ -0.76
SDC2-207ENST00000522911 RMDN1Q96DB5 314 aa10.29□□□□□ -0.76
SDC2-207ENST00000522911 MSANTD3Q96H12 275 aa10.29□□□□□ -0.76
SDC2-207ENST00000522911 ASB16Q96NS5 453 aa10.29□□□□□ -0.76
SDC2-207ENST00000522911 ACAP3Q96P50 834 aa10.29□□□□□ -0.76
SDC2-207ENST00000522911 KIFC3Q9BVG8 833 aa10.29□□□□□ -0.76
SDC2-207ENST00000522911 EPC1Q9H2F5 836 aa10.29□□□□□ -0.76
SDC2-207ENST00000522911 PLEKHA5Q9HAU0 1116 aa10.29□□□□□ -0.76
SDC2-207ENST00000522911 DDX19AQ9NUU7 478 aaKnown RBP10.29□□□□□ -0.76
SDC2-207ENST00000522911 ZSCAN32Q9NX65 697 aa10.29□□□□□ -0.76
SDC2-207ENST00000522911 AFF4Q9UHB7 1163 aaKnown RBP10.29□□□□□ -0.76
SDC2-207ENST00000522911 USP20Q9Y2K6 914 aa10.29□□□□□ -0.76
SDC2-207ENST00000522911 DOCK6Q96HP0 2047 aa10.29□□□□□ -0.76
SDC2-207ENST00000522911 PATJQ8NI35 1801 aa10.28□□□□□ -0.76
SDC2-207ENST00000522911 M0QZQ0 153 aa10.28□□□□□ -0.76
SDC2-207ENST00000522911 PODXLO00592 558 aa10.28□□□□□ -0.76
SDC2-207ENST00000522911 MAN2B1O00754 1011 aa10.28□□□□□ -0.76
SDC2-207ENST00000522911 SLC26A4O43511 780 aa10.28□□□□□ -0.76
SDC2-207ENST00000522911 OAZ2O95190 189 aa10.28□□□□□ -0.76
SDC2-207ENST00000522911 LRG1P02750 347 aa10.28□□□□□ -0.76
SDC2-207ENST00000522911 ADRB2P07550 413 aa10.28□□□□□ -0.76
SDC2-207ENST00000522911 CYP3A5P20815 502 aa10.28□□□□□ -0.76
SDC2-207ENST00000522911 TARSP26639 723 aaKnown RBP10.28□□□□□ -0.76
SDC2-207ENST00000522911 LRPAP1P30533 357 aa10.28□□□□□ -0.76
SDC2-207ENST00000522911 ELF1P32519 619 aa10.28□□□□□ -0.76
SDC2-207ENST00000522911 BRCC3P46736 316 aa10.28□□□□□ -0.76
SDC2-207ENST00000522911 AARSP49588 968 aaKnown RBP eCLIP10.28□□□□□ -0.76
SDC2-207ENST00000522911 TOB1P50616 345 aaPredicted RBP10.28□□□□□ -0.76
SDC2-207ENST00000522911 PEX3P56589 373 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms