RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 UBALD2Q8IYN6 164 aa7.72□□□□□ -1.17
SDCBP-210ENST00000522843 DCLK2Q8N568 766 aa7.72□□□□□ -1.17
SDCBP-210ENST00000522843 ABHD4Q8TB40 342 aa7.72□□□□□ -1.17
SDCBP-210ENST00000522843 FEZF2Q8TBJ5 459 aa7.72□□□□□ -1.17
SDCBP-210ENST00000522843 APPBP2Q92624 585 aa7.72□□□□□ -1.17
SDCBP-210ENST00000522843 PPP2R3CQ969Q6 453 aa7.72□□□□□ -1.17
SDCBP-210ENST00000522843 SEC62Q99442 399 aaKnown RBP7.72□□□□□ -1.17
SDCBP-210ENST00000522843 MPHOSPH6Q99547 160 aaKnown RBP7.72□□□□□ -1.17
SDCBP-210ENST00000522843 CPVLQ9H3G5 476 aa7.72□□□□□ -1.17
SDCBP-210ENST00000522843 TLE6Q9H808 572 aa7.72□□□□□ -1.17
SDCBP-210ENST00000522843 SETD4Q9NVD3 440 aa7.72□□□□□ -1.17
SDCBP-210ENST00000522843 FAM8A1Q9UBU6 413 aa7.72□□□□□ -1.17
SDCBP-210ENST00000522843 TPX2Q9ULW0 747 aaKnown RBP7.72□□□□□ -1.17
SDCBP-210ENST00000522843 ST14Q9Y5Y6 855 aa7.72□□□□□ -1.17
SDCBP-210ENST00000522843 R4GN57 208 aa7.72□□□□□ -1.17
SDCBP-210ENST00000522843 ETV2O00321 342 aaPredicted RBP7.71□□□□□ -1.18
SDCBP-210ENST00000522843 RNF113AO15541 343 aaKnown RBP7.71□□□□□ -1.18
SDCBP-210ENST00000522843 EIF3JO75822 258 aaKnown RBP7.71□□□□□ -1.18
SDCBP-210ENST00000522843 LMNAP02545 664 aaKnown RBP7.71□□□□□ -1.18
SDCBP-210ENST00000522843 RAC2P15153 192 aa7.71□□□□□ -1.18
SDCBP-210ENST00000522843 AOC1P19801 751 aa7.71□□□□□ -1.18
SDCBP-210ENST00000522843 UBA1P22314 1058 aaKnown RBP7.71□□□□□ -1.18
SDCBP-210ENST00000522843 TECP42680 631 aa7.71□□□□□ -1.18
SDCBP-210ENST00000522843 STXBP2Q15833 593 aa7.71□□□□□ -1.18
SDCBP-210ENST00000522843 ST3GAL2Q16842 350 aa7.71□□□□□ -1.18
SDCBP-210ENST00000522843 PAN2Q504Q3 1202 aaKnown RBP7.71□□□□□ -1.18
SDCBP-210ENST00000522843 HSP90AB4PQ58FF6 505 aa7.71□□□□□ -1.18
SDCBP-210ENST00000522843 RUFY4Q6ZNE9 571 aa7.71□□□□□ -1.18
SDCBP-210ENST00000522843 THAP5Q7Z6K1 395 aa7.71□□□□□ -1.18
SDCBP-210ENST00000522843 CMTR2Q8IYT2 770 aaKnown RBP7.71□□□□□ -1.18
SDCBP-210ENST00000522843 DTWD2Q8NBA8 298 aa7.71□□□□□ -1.18
SDCBP-210ENST00000522843 NSUN6Q8TEA1 469 aaKnown RBP7.71□□□□□ -1.18
SDCBP-210ENST00000522843 KCNN1Q92952 543 aa7.71□□□□□ -1.18
SDCBP-210ENST00000522843 SPATA33Q96N06 139 aa7.71□□□□□ -1.18
SDCBP-210ENST00000522843 NEK1Q96PY6 1258 aa7.71□□□□□ -1.18
SDCBP-210ENST00000522843 IWS1Q96ST2 819 aa7.71□□□□□ -1.18
SDCBP-210ENST00000522843 RMDN3Q96TC7 470 aa7.71□□□□□ -1.18
SDCBP-210ENST00000522843 TMEM47Q9BQJ4 181 aa7.71□□□□□ -1.18
SDCBP-210ENST00000522843 POMKQ9H5K3 350 aa7.71□□□□□ -1.18
SDCBP-210ENST00000522843 PCDHA4Q9UN74 947 aa7.71□□□□□ -1.18
SDCBP-210ENST00000522843 SMG5Q9UPR3 1016 aaKnown RBP7.71□□□□□ -1.18
SDCBP-210ENST00000522843 MRVI1Q9Y6F6 885 aa7.71□□□□□ -1.18
SDCBP-210ENST00000522843 CAPN6Q9Y6Q1 641 aa7.71□□□□□ -1.18
SDCBP-210ENST00000522843 ASPMQ8IZT6 3477 aa7.71□□□□□ -1.18
SDCBP-210ENST00000522843 FANCMQ8IYD8 2048 aa7.71□□□□□ -1.18
SDCBP-210ENST00000522843 FASNP49327 2511 aaKnown RBP7.71□□□□□ -1.18
SDCBP-210ENST00000522843 TSPY2A6NKD2 308 aa7.7□□□□□ -1.18
SDCBP-210ENST00000522843 B4DLN1 442 aa7.7□□□□□ -1.18
SDCBP-210ENST00000522843 GGPS1O95749 300 aa7.7□□□□□ -1.18
SDCBP-210ENST00000522843 APPP05067 770 aa7.7□□□□□ -1.18
SDCBP-210ENST00000522843 LGALS2P05162 132 aa7.7□□□□□ -1.18
SDCBP-210ENST00000522843 SNHG28P0DPA3 235 aa7.7□□□□□ -1.18
SDCBP-210ENST00000522843 GNAT2P19087 354 aa7.7□□□□□ -1.18
SDCBP-210ENST00000522843 MRPL12P52815 198 aaKnown RBP7.7□□□□□ -1.18
SDCBP-210ENST00000522843 MFAP1P55081 439 aaKnown RBP7.7□□□□□ -1.18
SDCBP-210ENST00000522843 FGD1P98174 961 aa7.7□□□□□ -1.18
SDCBP-210ENST00000522843 ZNF543Q08ER8 600 aa7.7□□□□□ -1.18
SDCBP-210ENST00000522843 COL9A2Q14055 689 aaPredicted RBP7.7□□□□□ -1.18
SDCBP-210ENST00000522843 PCNX4Q63HM2 1172 aa7.7□□□□□ -1.18
SDCBP-210ENST00000522843 SCARA3Q6AZY7 606 aa7.7□□□□□ -1.18
SDCBP-210ENST00000522843 KBTBD3Q8NAB2 608 aa7.7□□□□□ -1.18
SDCBP-210ENST00000522843 IL31RAQ8NI17 732 aa7.7□□□□□ -1.18
SDCBP-210ENST00000522843 CYP2W1Q8TAV3 490 aa7.7□□□□□ -1.18
SDCBP-210ENST00000522843 KCNG4Q8TDN1 519 aa7.7□□□□□ -1.18
SDCBP-210ENST00000522843 LMBR1Q8WVP7 490 aa7.7□□□□□ -1.18
SDCBP-210ENST00000522843 UBE2FQ969M7 185 aa7.7□□□□□ -1.18
SDCBP-210ENST00000522843 ELMO3Q96BJ8 720 aa7.7□□□□□ -1.18
SDCBP-210ENST00000522843 AGO3Q9H9G7 860 aaKnown RBP7.7□□□□□ -1.18
SDCBP-210ENST00000522843 PXMP2Q9NR77 195 aa7.7□□□□□ -1.18
SDCBP-210ENST00000522843 FAM208BQ5VWN6 2430 aa7.7□□□□□ -1.18
SDCBP-210ENST00000522843 HIDE1A8MVS5 230 aa7.69□□□□□ -1.18
SDCBP-210ENST00000522843 SMARCA5O60264 1052 aaPredicted RBP7.69□□□□□ -1.18
SDCBP-210ENST00000522843 FGRP09769 529 aa7.69□□□□□ -1.18
SDCBP-210ENST00000522843 WEE2P0C1S8 567 aa7.69□□□□□ -1.18
SDCBP-210ENST00000522843 GOLGA8HP0CJ92 632 aa7.69□□□□□ -1.18
SDCBP-210ENST00000522843 APOBRQ0VD83 1088 aa7.69□□□□□ -1.18
SDCBP-210ENST00000522843 LRRC14Q15048 493 aa7.69□□□□□ -1.18
SDCBP-210ENST00000522843 FBXO47Q5MNV8 452 aa7.69□□□□□ -1.18
SDCBP-210ENST00000522843 TSHZ3Q63HK5 1081 aa7.69□□□□□ -1.18
SDCBP-210ENST00000522843 LLGL2Q6P1M3 1020 aa7.69□□□□□ -1.18
SDCBP-210ENST00000522843 RASGRP4Q8TDF6 673 aa7.69□□□□□ -1.18
SDCBP-210ENST00000522843 CDCA3Q99618 268 aaPredicted RBP7.69□□□□□ -1.18
SDCBP-210ENST00000522843 MIPEPQ99797 713 aa7.69□□□□□ -1.18
SDCBP-210ENST00000522843 PDCD2LQ9BRP1 358 aa7.69□□□□□ -1.18
SDCBP-210ENST00000522843 UBA5Q9GZZ9 404 aa7.69□□□□□ -1.18
SDCBP-210ENST00000522843 FNDC1Q4ZHG4 1894 aaPredicted RBP7.68□□□□□ -1.18
SDCBP-210ENST00000522843 DOCK5Q9H7D0 1870 aa7.68□□□□□ -1.18
SDCBP-210ENST00000522843 ZFYVE26Q68DK2 2539 aa7.68□□□□□ -1.18
SDCBP-210ENST00000522843 ANKRD33BA6NCL7 494 aa7.68□□□□□ -1.18
SDCBP-210ENST00000522843 ORC4O43929 436 aa7.68□□□□□ -1.18
SDCBP-210ENST00000522843 NUAK1O60285 661 aa7.68□□□□□ -1.18
SDCBP-210ENST00000522843 RANBP6O60518 1105 aaKnown RBP7.68□□□□□ -1.18
SDCBP-210ENST00000522843 RAB11FIP3O75154 756 aa7.68□□□□□ -1.18
SDCBP-210ENST00000522843 TOP1P11387 765 aaKnown RBP7.68□□□□□ -1.18
SDCBP-210ENST00000522843 CD52P31358 61 aa7.68□□□□□ -1.18
SDCBP-210ENST00000522843 ATXN1P54253 815 aaKnown RBP7.68□□□□□ -1.18
SDCBP-210ENST00000522843 UBE3AQ05086 875 aa7.68□□□□□ -1.18
SDCBP-210ENST00000522843 SLBPQ14493 270 aaKnown RBP eCLIP7.68□□□□□ -1.18
SDCBP-210ENST00000522843 CDC37Q16543 378 aaPredicted RBP7.68□□□□□ -1.18
SDCBP-210ENST00000522843 ARHGEF16Q5VV41 709 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms