RNA–Protein interactions for RNA: ENST00000522841.6

SMG1P3-206, Transcript of SMG1 pseudogene 3, humanhuman

TSL 2 BASIC

Gene SMG1P3, Length 2,774 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-206ENST00000522841 CCDC38Q502W7 563 aa17.41■□□□□ 0.38
SMG1P3-206ENST00000522841 SPDYCQ5MJ68 293 aa17.41■□□□□ 0.38
SMG1P3-206ENST00000522841 FNBP1Q96RU3 617 aa17.41■□□□□ 0.38
SMG1P3-206ENST00000522841 DDX23Q9BUQ8 820 aaKnown RBP17.41■□□□□ 0.38
SMG1P3-206ENST00000522841 C17orf75Q9HAS0 396 aa17.41■□□□□ 0.38
SMG1P3-206ENST00000522841 PASKQ96RG2 1323 aa17.41■□□□□ 0.38
SMG1P3-206ENST00000522841 RIPK2O43353 540 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 GJB6O95452 261 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 ECEL1O95672 775 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 ATP4AP20648 1035 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 PIK3CAP42336 1068 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 CNTN2Q02246 1040 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 KRT17Q04695 432 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 BYSLQ13895 437 aaKnown RBP17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 C15orf39Q6ZRI6 1047 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 SEPT14Q6ZU15 432 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 MICALCLQ6ZW33 695 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 USP37Q86T82 979 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 ASAP3Q8TDY4 903 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 PAGR1Q9BTK6 254 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 ADAM7Q9H2U9 754 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 AS3MTQ9HBK9 375 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 ZNF541Q9H0D2 1346 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 FSCN2O14926 492 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 TP73O15350 636 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 VPS41P49754 854 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 ACTN3Q08043 901 aaPredicted RBP17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 DCAF15Q66K64 600 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 C6orf89Q6UWU4 347 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 N4BP2L2Q92802 583 aaPredicted RBP17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 SEC16BQ96JE7 1060 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 LRRC19Q9H756 370 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 R3HDM2Q9Y2K5 976 aaKnown RBP17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 EXTL3O43909 919 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 VNN1O95497 513 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 GJC1P36383 396 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 SPRED3Q2MJR0 410 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 XRRA1Q6P2D8 792 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 DLK2Q6UY11 383 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 PWWP2AQ96N64 755 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 XPO6Q96QU8 1125 aaKnown RBP17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 C11orf70Q9BRQ4 267 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 CCDC113Q9H0I3 377 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 ACAD9Q9H845 621 aa17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 APOBEC3GQ9HC16 384 aaKnown RBP17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 AGO2Q9UKV8 859 aaKnown RBP17.4■□□□□ 0.38
SMG1P3-206ENST00000522841 SRRM3A6NNA2 597 aaPredicted RBP17.39■□□□□ 0.37
SMG1P3-206ENST00000522841 MAFGO15525 162 aa17.39■□□□□ 0.37
SMG1P3-206ENST00000522841 C4BPAP04003 597 aaKnown RBP17.39■□□□□ 0.37
SMG1P3-206ENST00000522841 PAEPP09466 180 aa17.39■□□□□ 0.37
SMG1P3-206ENST00000522841 CHKAP35790 457 aa17.39■□□□□ 0.37
SMG1P3-206ENST00000522841 SATB1Q01826 763 aa17.39■□□□□ 0.37
SMG1P3-206ENST00000522841 WDR44Q5JSH3 913 aa17.39■□□□□ 0.37
SMG1P3-206ENST00000522841 CRELD2Q6UXH1 353 aaPredicted RBP17.39■□□□□ 0.37
SMG1P3-206ENST00000522841 CPLX4Q7Z7G2 160 aa17.39■□□□□ 0.37
SMG1P3-206ENST00000522841 SPATS2Q86XZ4 545 aaKnown RBP17.39■□□□□ 0.37
SMG1P3-206ENST00000522841 SLC24A3Q9HC58 644 aa17.39■□□□□ 0.37
SMG1P3-206ENST00000522841 AAASQ9NRG9 546 aa17.39■□□□□ 0.37
SMG1P3-206ENST00000522841 PARP2Q9UGN5 583 aa17.39■□□□□ 0.37
SMG1P3-206ENST00000522841 ASIC3Q9UHC3 531 aa17.39■□□□□ 0.37
SMG1P3-206ENST00000522841 UMODL1Q5DID0 1318 aa17.39■□□□□ 0.37
SMG1P3-206ENST00000522841 ACSL3O95573 720 aa17.39■□□□□ 0.37
SMG1P3-206ENST00000522841 EDN1P05305 212 aa17.39■□□□□ 0.37
SMG1P3-206ENST00000522841 SUPT20HL2P0C7V6 817 aa17.39■□□□□ 0.37
SMG1P3-206ENST00000522841 RARGP13631 454 aa17.39■□□□□ 0.37
SMG1P3-206ENST00000522841 SUPT20HL1Q3ZLR7 823 aa17.39■□□□□ 0.37
SMG1P3-206ENST00000522841 ZACNQ401N2 412 aa17.39■□□□□ 0.37
SMG1P3-206ENST00000522841 ERMARDQ5T6L9 678 aa17.39■□□□□ 0.37
SMG1P3-206ENST00000522841 MIS18BP1Q6P0N0 1132 aa17.39■□□□□ 0.37
SMG1P3-206ENST00000522841 PGM2Q96G03 612 aa17.39■□□□□ 0.37
SMG1P3-206ENST00000522841 TARS2Q9BW92 718 aaKnown RBP17.39■□□□□ 0.37
SMG1P3-206ENST00000522841 TEX13BQ9BXU2 312 aa17.39■□□□□ 0.37
SMG1P3-206ENST00000522841 PCDHB2Q9Y5E7 798 aa17.39■□□□□ 0.37
SMG1P3-206ENST00000522841 FOXO6A8MYZ6 492 aa17.38■□□□□ 0.37
SMG1P3-206ENST00000522841 NSFP46459 744 aaKnown RBP17.38■□□□□ 0.37
SMG1P3-206ENST00000522841 STRN3Q13033 797 aa17.38■□□□□ 0.37
SMG1P3-206ENST00000522841 CALCOCO2Q13137 446 aa17.38■□□□□ 0.37
SMG1P3-206ENST00000522841 TMEM270Q6UE05 265 aa17.38■□□□□ 0.37
SMG1P3-206ENST00000522841 KIRREL3Q8IZU9 778 aa17.38■□□□□ 0.37
SMG1P3-206ENST00000522841 C12orf50Q8NA57 414 aaPredicted RBP17.38■□□□□ 0.37
SMG1P3-206ENST00000522841 GINM1Q9NU53 330 aa17.38■□□□□ 0.37
SMG1P3-206ENST00000522841 USTQ9Y2C2 406 aa17.38■□□□□ 0.37
SMG1P3-206ENST00000522841 SPATA31C2B4DYI2 1134 aa17.38■□□□□ 0.37
SMG1P3-206ENST00000522841 FDX1P10109 184 aa17.38■□□□□ 0.37
SMG1P3-206ENST00000522841 DRD4P21917 467 aa17.38■□□□□ 0.37
SMG1P3-206ENST00000522841 GLRA2P23416 452 aa17.38■□□□□ 0.37
SMG1P3-206ENST00000522841 PAX7P23759 505 aa17.38■□□□□ 0.37
SMG1P3-206ENST00000522841 ELF1P32519 619 aa17.38■□□□□ 0.37
SMG1P3-206ENST00000522841 NF2P35240 595 aa17.38■□□□□ 0.37
SMG1P3-206ENST00000522841 PSMD6Q15008 389 aa17.38■□□□□ 0.37
SMG1P3-206ENST00000522841 LONRF1Q17RB8 773 aa17.38■□□□□ 0.37
SMG1P3-206ENST00000522841 XKR3Q5GH77 459 aa17.38■□□□□ 0.37
SMG1P3-206ENST00000522841 PRUNE1Q86TP1 453 aa17.38■□□□□ 0.37
SMG1P3-206ENST00000522841 CCDC50Q8IVM0 306 aa17.38■□□□□ 0.37
SMG1P3-206ENST00000522841 MTFR1LQ9H019 292 aa17.38■□□□□ 0.37
SMG1P3-206ENST00000522841 PCDHB4Q9Y5E5 795 aa17.38■□□□□ 0.37
SMG1P3-206ENST00000522841 RASGRF2O14827 1237 aa17.37■□□□□ 0.37
SMG1P3-206ENST00000522841 DKC1O60832 514 aaKnown RBP eCLIP17.37■□□□□ 0.37
SMG1P3-206ENST00000522841 ATP2C2O75185 946 aa17.37■□□□□ 0.37
SMG1P3-206ENST00000522841 RPS12P25398 132 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms