RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 EYA3Q99504 573 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 HDAC8Q9BY41 377 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 EIF2AQ9BY44 585 aaKnown RBP4.48□□□□□ -1.69
SKP1-209ENST00000522552 RNPEPQ9H4A4 650 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 TMEM8AQ9HCN3 771 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 SEPSECSQ9HD40 501 aaKnown RBP4.48□□□□□ -1.69
SKP1-209ENST00000522552 JPH1Q9HDC5 661 aaPredicted RBP4.48□□□□□ -1.69
SKP1-209ENST00000522552 NECTIN3Q9NQS3 549 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 KCNK4Q9NYG8 393 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.48□□□□□ -1.69
SKP1-209ENST00000522552 PRSS50Q9UI38 385 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 SCOCQ9UIL1 159 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 KNSTRNQ9Y448 316 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 ZFP37Q9Y6Q3 630 aaPredicted RBP4.48□□□□□ -1.69
SKP1-209ENST00000522552 SYNRGQ9UMZ2 1314 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 ST20-MTHFSA0A0A6YYL1 179 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 C7orf72A4D263 438 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 H0Y626 953 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 M0R082 166 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 THAP12O43422 761 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 PRPF6O94906 941 aaKnown RBP4.48□□□□□ -1.69
SKP1-209ENST00000522552 SLC4A1P02730 911 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 ALBP02768 609 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 MT-ND5P03915 603 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 TPM2P07951 284 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 PFKMP08237 780 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 ITGA2BP08514 1039 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 CELA3BP08861 270 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 GSTM1P09488 218 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 GSPT1P15170 499 aaKnown RBP4.48□□□□□ -1.69
SKP1-209ENST00000522552 RXRAP19793 462 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 ABCD3P28288 659 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 ACSL1P33121 698 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 MLH1P40692 756 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 GSK3AP49840 483 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 CLCN2P51788 898 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 CREB5Q02930 508 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 PPP3CAQ08209 521 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 LAPTM5Q13571 262 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 ZNF827Q17R98 1081 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 MMEL1Q495T6 779 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 VWA3BQ502W6 1294 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 MUM1L1Q5H9M0 696 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 RTP2Q5QGT7 225 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 RRAGBQ5VZM2 374 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 SLC22A25Q6T423 547 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 KIAA1211Q6ZU35 1233 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 BBS12Q6ZW61 710 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 BTN2A1Q7KYR7 527 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 DYMQ7RTS9 669 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 CEP97Q8IW35 865 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 RPAP2Q8IXW5 612 aaPredicted RBP4.48□□□□□ -1.69
SKP1-209ENST00000522552 DZIP1LQ8IYY4 767 aaKnown RBP4.48□□□□□ -1.69
SKP1-209ENST00000522552 OR8H3Q8N146 312 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 OTUD6BQ8N6M0 293 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 ZNF417Q8TAU3 575 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 KCNG4Q8TDN1 519 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 UBASH3BQ8TF42 649 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 NEIL1Q96FI4 390 aaPredicted RBP4.48□□□□□ -1.69
SKP1-209ENST00000522552 LRRC46Q96FV0 321 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 FAM167AQ96KS9 214 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 SAMD11Q96NU1 681 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 PPP1R9BQ96SB3 815 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 DMRTA2Q96SC8 542 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 ZNF587Q96SQ5 575 aaPredicted RBP4.48□□□□□ -1.69
SKP1-209ENST00000522552 DDX23Q9BUQ8 820 aaKnown RBP4.48□□□□□ -1.69
SKP1-209ENST00000522552 TMPRSS13Q9BYE2 586 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 EDEM3Q9BZQ6 932 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 ASCC2Q9H1I8 757 aaPredicted RBP4.48□□□□□ -1.69
SKP1-209ENST00000522552 C2orf40Q9H1Z8 148 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 SEMA6BQ9H3T3 888 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 EIF2B3Q9NR50 452 aaKnown RBP4.48□□□□□ -1.69
SKP1-209ENST00000522552 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.48□□□□□ -1.69
SKP1-209ENST00000522552 BTG4Q9NY30 223 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 EIF2B4Q9UI10 523 aaKnown RBP4.48□□□□□ -1.69
SKP1-209ENST00000522552 DSEQ9UL01 958 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 MKL2Q9ULH7 1088 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 PCDHA6Q9UN73 950 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 CYP46A1Q9Y6A2 500 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 CDY2AQ9Y6F7 541 aa4.48□□□□□ -1.69
SKP1-209ENST00000522552 UBA6A0AVT1 1052 aaPredicted RBP4.47□□□□□ -1.69
SKP1-209ENST00000522552 H7BY64 318 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 GTPBP1O00178 669 aaKnown RBP4.47□□□□□ -1.69
SKP1-209ENST00000522552 COBLO75128 1261 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 TBCAO75347 108 aaKnown RBP4.47□□□□□ -1.69
SKP1-209ENST00000522552 B3GALNT1O75752 331 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 GOSR1O95249 250 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 GDF11O95390 407 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 SCG2P13521 617 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 KCNA2P16389 499 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 GABRB3P28472 473 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 PEX19P40855 299 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 CD86P42081 329 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 PHKA1P46020 1223 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 ZNF132P52740 706 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 NLRP5P59047 1200 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 ACTR2P61160 394 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 UBXN1Q04323 297 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 MYBPC3Q14896 1274 aa4.47□□□□□ -1.69
SKP1-209ENST00000522552 C1orf141Q5JVX7 400 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms