RNA–Protein interactions for RNA: ENST00000522519.5

MSC-AS1-208, MSC antisense RNA 1, humanhuman

TSL 2 BASIC

Gene MSC-AS1, Length 1,537 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-208ENST00000522519 MARCH5Q9NX47 278 aa17■□□□□ 0.31
MSC-AS1-208ENST00000522519 MTMR10Q9NXD2 777 aa17■□□□□ 0.31
MSC-AS1-208ENST00000522519 CACNG4Q9UBN1 327 aa17■□□□□ 0.31
MSC-AS1-208ENST00000522519 PRG3Q9Y2Y8 225 aaPredicted RBP17■□□□□ 0.31
MSC-AS1-208ENST00000522519 CASTOR2A6NHX0 329 aa16.99■□□□□ 0.31
MSC-AS1-208ENST00000522519 ZNF233A6NK53 670 aa16.99■□□□□ 0.31
MSC-AS1-208ENST00000522519 NRP1O14786 923 aa16.99■□□□□ 0.31
MSC-AS1-208ENST00000522519 IL18RAPO95256 599 aa16.99■□□□□ 0.31
MSC-AS1-208ENST00000522519 ALDH2P05091 517 aa16.99■□□□□ 0.31
MSC-AS1-208ENST00000522519 OR1G1P47890 313 aa16.99■□□□□ 0.31
MSC-AS1-208ENST00000522519 WNT7BP56706 349 aa16.99■□□□□ 0.31
MSC-AS1-208ENST00000522519 PLCB3Q01970 1234 aa16.99■□□□□ 0.31
MSC-AS1-208ENST00000522519 STIM1Q13586 685 aa16.99■□□□□ 0.31
MSC-AS1-208ENST00000522519 MYBPC2Q14324 1141 aa16.99■□□□□ 0.31
MSC-AS1-208ENST00000522519 SNRNP35Q16560 246 aaKnown RBP16.99■□□□□ 0.31
MSC-AS1-208ENST00000522519 JADE1Q6IE81 842 aa16.99■□□□□ 0.31
MSC-AS1-208ENST00000522519 BCL7CQ8WUZ0 217 aaPredicted RBP16.99■□□□□ 0.31
MSC-AS1-208ENST00000522519 KIF12Q96FN5 646 aa16.99■□□□□ 0.31
MSC-AS1-208ENST00000522519 IGSF21Q96ID5 467 aa16.99■□□□□ 0.31
MSC-AS1-208ENST00000522519 TSPAN18Q96SJ8 248 aa16.99■□□□□ 0.31
MSC-AS1-208ENST00000522519 PAAF1Q9BRP4 392 aa16.99■□□□□ 0.31
MSC-AS1-208ENST00000522519 ALG13Q9NP73 1137 aaKnown RBP16.99■□□□□ 0.31
MSC-AS1-208ENST00000522519 SPG21Q9NZD8 308 aa16.99■□□□□ 0.31
MSC-AS1-208ENST00000522519 FAN1Q9Y2M0 1017 aa16.99■□□□□ 0.31
MSC-AS1-208ENST00000522519 REV3LO60673 3130 aa16.99■□□□□ 0.31
MSC-AS1-208ENST00000522519 PSMA7O14818 248 aa16.98■□□□□ 0.31
MSC-AS1-208ENST00000522519 GRM6O15303 877 aa16.98■□□□□ 0.31
MSC-AS1-208ENST00000522519 EXOC3O60645 756 aa16.98■□□□□ 0.31
MSC-AS1-208ENST00000522519 NFICP08651 508 aa16.98■□□□□ 0.31
MSC-AS1-208ENST00000522519 STX17P56962 302 aa16.98■□□□□ 0.31
MSC-AS1-208ENST00000522519 HSP90AA2PQ14568 343 aaPredicted RBP16.98■□□□□ 0.31
MSC-AS1-208ENST00000522519 ZBTB6Q15916 424 aa16.98■□□□□ 0.31
MSC-AS1-208ENST00000522519 EDRF1Q3B7T1 1238 aa16.98■□□□□ 0.31
MSC-AS1-208ENST00000522519 EFCAB13Q8IY85 973 aa16.98■□□□□ 0.31
MSC-AS1-208ENST00000522519 SPPL3Q8TCT6 385 aa16.98■□□□□ 0.31
MSC-AS1-208ENST00000522519 NELFBQ8WX92 580 aa16.98■□□□□ 0.31
MSC-AS1-208ENST00000522519 C18orf25Q96B23 403 aaPredicted RBP16.98■□□□□ 0.31
MSC-AS1-208ENST00000522519 TMEM169Q96HH4 297 aa16.98■□□□□ 0.31
MSC-AS1-208ENST00000522519 CDX2Q99626 313 aaPredicted RBP16.98■□□□□ 0.31
MSC-AS1-208ENST00000522519 XPO4Q9C0E2 1151 aaKnown RBP16.98■□□□□ 0.31
MSC-AS1-208ENST00000522519 IFNKQ9P0W0 207 aa16.98■□□□□ 0.31
MSC-AS1-208ENST00000522519 TUBGCP4Q9UGJ1 667 aa16.98■□□□□ 0.31
MSC-AS1-208ENST00000522519 UBQLN1Q9UMX0 589 aaKnown RBP16.98■□□□□ 0.31
MSC-AS1-208ENST00000522519 DERAQ9Y315 318 aa16.98■□□□□ 0.31
MSC-AS1-208ENST00000522519 C2CD2Q9Y426 696 aa16.98■□□□□ 0.31
MSC-AS1-208ENST00000522519 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.98■□□□□ 0.31
MSC-AS1-208ENST00000522519 F8W810 466 aa16.97■□□□□ 0.31
MSC-AS1-208ENST00000522519 CBFA2T2O43439 604 aa16.97■□□□□ 0.31
MSC-AS1-208ENST00000522519 XPOTO43592 962 aaKnown RBP16.97■□□□□ 0.31
MSC-AS1-208ENST00000522519 NR2F2P24468 414 aa16.97■□□□□ 0.31
MSC-AS1-208ENST00000522519 CCNE1P24864 410 aa16.97■□□□□ 0.31
MSC-AS1-208ENST00000522519 UBE3AQ05086 875 aa16.97■□□□□ 0.31
MSC-AS1-208ENST00000522519 ADGRE1Q14246 886 aa16.97■□□□□ 0.31
MSC-AS1-208ENST00000522519 TMEM132DQ14C87 1099 aa16.97■□□□□ 0.31
MSC-AS1-208ENST00000522519 CDKAL1Q5VV42 579 aa16.97■□□□□ 0.31
MSC-AS1-208ENST00000522519 NT5DC4Q86YG4 428 aa16.97■□□□□ 0.31
MSC-AS1-208ENST00000522519 RDH13Q8NBN7 331 aa16.97■□□□□ 0.31
MSC-AS1-208ENST00000522519 SPC24Q8NBT2 197 aa16.97■□□□□ 0.31
MSC-AS1-208ENST00000522519 MYLIPQ8WY64 445 aa16.97■□□□□ 0.31
MSC-AS1-208ENST00000522519 RABGGTAQ92696 567 aa16.97■□□□□ 0.31
MSC-AS1-208ENST00000522519 DHTKD1Q96HY7 919 aaPredicted RBP16.97■□□□□ 0.31
MSC-AS1-208ENST00000522519 UROC1Q96N76 676 aa16.97■□□□□ 0.31
MSC-AS1-208ENST00000522519 GAS2L1Q99501 681 aaPredicted RBP16.97■□□□□ 0.31
MSC-AS1-208ENST00000522519 LMAN2LQ9H0V9 348 aa16.97■□□□□ 0.31
MSC-AS1-208ENST00000522519 LZTS1Q9Y250 596 aa16.97■□□□□ 0.31
MSC-AS1-208ENST00000522519 TRIM49BA6NDI0 452 aa16.96■□□□□ 0.31
MSC-AS1-208ENST00000522519 KIF4AO95239 1232 aa16.96■□□□□ 0.31
MSC-AS1-208ENST00000522519 TPM3P06753 285 aa16.96■□□□□ 0.31
MSC-AS1-208ENST00000522519 CYP3A5P20815 502 aa16.96■□□□□ 0.31
MSC-AS1-208ENST00000522519 DNAJB1P25685 340 aa16.96■□□□□ 0.31
MSC-AS1-208ENST00000522519 CASP4P49662 377 aa16.96■□□□□ 0.31
MSC-AS1-208ENST00000522519 CLCNKBP51801 687 aa16.96■□□□□ 0.31
MSC-AS1-208ENST00000522519 PMS1P54277 932 aaKnown RBP16.96■□□□□ 0.31
MSC-AS1-208ENST00000522519 LRRC63Q05C16 580 aa16.96■□□□□ 0.31
MSC-AS1-208ENST00000522519 CYP24A1Q07973 514 aa16.96■□□□□ 0.31
MSC-AS1-208ENST00000522519 UPP1Q16831 310 aa16.96■□□□□ 0.31
MSC-AS1-208ENST00000522519 POF1BQ8WVV4 589 aa16.96■□□□□ 0.31
MSC-AS1-208ENST00000522519 TSG101Q99816 390 aa16.96■□□□□ 0.31
MSC-AS1-208ENST00000522519 COLEC11Q9BWP8 271 aa16.96■□□□□ 0.31
MSC-AS1-208ENST00000522519 PDE11AQ9HCR9 933 aa16.96■□□□□ 0.31
MSC-AS1-208ENST00000522519 SAMSN1Q9NSI8 373 aaKnown RBP16.96■□□□□ 0.31
MSC-AS1-208ENST00000522519 TMEM189-UBE2V1I3L0A0 370 aa16.96■□□□□ 0.3
MSC-AS1-208ENST00000522519 EFEMP2O95967 443 aa16.96■□□□□ 0.3
MSC-AS1-208ENST00000522519 POU3F3P20264 500 aaPredicted RBP16.96■□□□□ 0.3
MSC-AS1-208ENST00000522519 RPL13P26373 211 aaKnown RBP16.96■□□□□ 0.3
MSC-AS1-208ENST00000522519 LRPAP1P30533 357 aa16.96■□□□□ 0.3
MSC-AS1-208ENST00000522519 KRT17Q04695 432 aa16.96■□□□□ 0.3
MSC-AS1-208ENST00000522519 CAMK1Q14012 370 aa16.96■□□□□ 0.3
MSC-AS1-208ENST00000522519 SURF1Q15526 300 aa16.96■□□□□ 0.3
MSC-AS1-208ENST00000522519 CEP135Q66GS9 1140 aa16.96■□□□□ 0.3
MSC-AS1-208ENST00000522519 ANKRD40Q6AI12 368 aa16.96■□□□□ 0.3
MSC-AS1-208ENST00000522519 ZSCAN30Q86W11 494 aa16.96■□□□□ 0.3
MSC-AS1-208ENST00000522519 DRC7Q8IY82 874 aa16.96■□□□□ 0.3
MSC-AS1-208ENST00000522519 TMEM130Q8N3G9 435 aa16.96■□□□□ 0.3
MSC-AS1-208ENST00000522519 C3orf58Q8NDZ4 430 aa16.96■□□□□ 0.3
MSC-AS1-208ENST00000522519 DDX27Q96GQ7 796 aaKnown RBP16.96■□□□□ 0.3
MSC-AS1-208ENST00000522519 VN1R3Q9BXE9 311 aa16.96■□□□□ 0.3
MSC-AS1-208ENST00000522519 ADAM28Q9UKQ2 775 aa16.96■□□□□ 0.3
MSC-AS1-208ENST00000522519 PTPRJQ12913 1337 aa16.95■□□□□ 0.3
MSC-AS1-208ENST00000522519 ESPNB1AK53 854 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms