RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 PCDHB2Q9Y5E7 798 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 CYP11B2P19099 503 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 P3H1Q32P28 736 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 IL31Q6EBC2 164 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 PDLIM2Q96JY6 352 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 MUC3BQ9H195 1237 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 DIP2CQ9Y2E4 1556 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 CEMIPQ8WUJ3 1361 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 CEP152O94986 1710 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 NPTXRO95502 500 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 HLA-DRAP01903 254 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 HIST1H2AGP0C0S8 130 aaPredicted RBP17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 HIST1H2ADP20671 130 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 ARID5BQ14865 1188 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 PDIA6Q15084 440 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 PDCD2Q16342 344 aaPredicted RBP17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 EFHC1Q5JVL4 640 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 HIST1H2AHQ96KK5 128 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 HIST1H2AJQ99878 128 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 H2AFJQ9BTM1 129 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 TEX12Q9BXU0 123 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 FOXP2O15409 715 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 TEX33O43247 280 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 ATP9BO43861 1147 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 CXCL9Q07325 125 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 DHX34Q14147 1143 aaKnown RBP17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 TMCO4Q5TGY1 634 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 CATSPERBQ9H7T0 1116 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 FBXO28Q9NVF7 368 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 ZFATQ9P243 1243 aa17.12■□□□□ 0.33
PCDHA3-201ENST00000522353 KPNA6O60684 536 aa17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 MMEP08473 750 aa17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 KRT80Q6KB66 452 aa17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 MTHFD1LQ6UB35 978 aa17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 CD302Q8IX05 232 aa17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 ZBED8Q8IZ13 594 aa17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 TSPYL2Q9H2G4 693 aaPredicted RBP17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 PPARGC1AQ9UBK2 798 aaKnown RBP17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 PCDHGB4Q9UN71 923 aa17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 ADGRG1Q9Y653 693 aa17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 SLC30A1Q9Y6M5 507 aa17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 MYMKA6NI61 221 aa17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 F5H423 210 aaPredicted RBP17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 MDM2Q00987 491 aaPredicted RBP17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 CAPRIN1Q14444 709 aaKnown RBP17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 EPM2AIP1Q7L775 607 aaPredicted RBP17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 SCFD1Q8WVM8 642 aa17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 KRT35Q92764 455 aa17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 EHD4Q9H223 541 aa17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 LIMA1Q9UHB6 759 aaKnown RBP17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 CFAP69A5D8W1 941 aa17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 FAM205CA6NFA0 338 aa17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 FOXN1O15353 648 aa17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 PNMA6AP0CW24 399 aaPredicted RBP17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 ODC1P11926 461 aa17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 GNL1P36915 607 aaPredicted RBP17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 FBXO38Q6PIJ6 1188 aa17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 PABPC5Q96DU9 382 aaKnown RBP17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 TARS2Q9BW92 718 aaKnown RBP17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 DDX47Q9H0S4 455 aaKnown RBP17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 MRPL40Q9NQ50 206 aaKnown RBP17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 H7C4K7 107 aa17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 FBXW4P57775 412 aa17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 IZUMO3Q5VZ72 239 aa17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 TRAPPC11Q7Z392 1133 aa17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 ATL2Q8NHH9 583 aa17.11■□□□□ 0.33
PCDHA3-201ENST00000522353 FAM200BP0CF97 657 aa17.1■□□□□ 0.33
PCDHA3-201ENST00000522353 MAP4P27816 1152 aaKnown RBP17.1■□□□□ 0.33
PCDHA3-201ENST00000522353 SLC26A2P50443 739 aa17.1■□□□□ 0.33
PCDHA3-201ENST00000522353 PMS2P54278 862 aa17.1■□□□□ 0.33
PCDHA3-201ENST00000522353 NPEPPSP55786 919 aa17.1■□□□□ 0.33
PCDHA3-201ENST00000522353 UGP2Q16851 508 aa17.1■□□□□ 0.33
PCDHA3-201ENST00000522353 METTL16Q86W50 562 aaKnown RBP17.1■□□□□ 0.33
PCDHA3-201ENST00000522353 MFN1Q8IWA4 741 aa17.1■□□□□ 0.33
PCDHA3-201ENST00000522353 HPDLQ96IR7 371 aa17.1■□□□□ 0.33
PCDHA3-201ENST00000522353 DCCP43146 1447 aa17.1■□□□□ 0.33
PCDHA3-201ENST00000522353 CFAP99D6REC4 459 aa17.1■□□□□ 0.33
PCDHA3-201ENST00000522353 ARL4DP49703 201 aa17.1■□□□□ 0.33
PCDHA3-201ENST00000522353 SYTL3Q4VX76 610 aa17.1■□□□□ 0.33
PCDHA3-201ENST00000522353 HIBCHQ6NVY1 386 aaPredicted RBP17.1■□□□□ 0.33
PCDHA3-201ENST00000522353 BTBD6Q96KE9 485 aa17.1■□□□□ 0.33
PCDHA3-201ENST00000522353 NAGPAQ9UK23 515 aa17.1■□□□□ 0.33
PCDHA3-201ENST00000522353 A0A0G2JND7 137 aa17.1■□□□□ 0.33
PCDHA3-201ENST00000522353 FASTKD1Q53R41 847 aaKnown RBP17.1■□□□□ 0.33
PCDHA3-201ENST00000522353 FAM83AQ86UY5 434 aa17.1■□□□□ 0.33
PCDHA3-201ENST00000522353 ACER1Q8TDN7 264 aa17.1■□□□□ 0.33
PCDHA3-201ENST00000522353 FAM49BQ9NUQ9 324 aa17.1■□□□□ 0.33
PCDHA3-201ENST00000522353 MANSC4A6NHS7 340 aaPredicted RBP17.1■□□□□ 0.33
PCDHA3-201ENST00000522353 EEF2KO00418 725 aaKnown RBP17.1■□□□□ 0.33
PCDHA3-201ENST00000522353 PYGBP11216 843 aa17.1■□□□□ 0.33
PCDHA3-201ENST00000522353 RALBP11234 206 aa17.1■□□□□ 0.33
PCDHA3-201ENST00000522353 MUTP22033 750 aa17.1■□□□□ 0.33
PCDHA3-201ENST00000522353 SSTR3P32745 418 aaPredicted RBP17.1■□□□□ 0.33
PCDHA3-201ENST00000522353 ARSEP51690 589 aa17.1■□□□□ 0.33
PCDHA3-201ENST00000522353 SEPT8Q92599 483 aa17.1■□□□□ 0.33
PCDHA3-201ENST00000522353 NRXN1Q9ULB1 1477 aa17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 SSU72P8A0A1W2PR75 194 aa17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 NKRFO15226 690 aaKnown RBP eCLIP17.09■□□□□ 0.33
PCDHA3-201ENST00000522353 ATP5HO75947 161 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms