RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 TUBGCP4Q9UGJ1 667 aa22.6■■□□□ 1.21
SDCBP-209ENST00000522243 TBX20Q9UMR3 447 aa22.6■■□□□ 1.21
SDCBP-209ENST00000522243 NUB1Q9Y5A7 615 aa22.6■■□□□ 1.21
SDCBP-209ENST00000522243 BACE2Q9Y5Z0 518 aa22.6■■□□□ 1.21
SDCBP-209ENST00000522243 FSHRP23945 695 aa22.59■■□□□ 1.21
SDCBP-209ENST00000522243 RPL9P32969 192 aaKnown RBP22.59■■□□□ 1.21
SDCBP-209ENST00000522243 ZNF131P52739 623 aa22.59■■□□□ 1.21
SDCBP-209ENST00000522243 VARS2Q5ST30 1063 aaKnown RBP22.59■■□□□ 1.21
SDCBP-209ENST00000522243 CLIC6Q96NY7 704 aa22.59■■□□□ 1.21
SDCBP-209ENST00000522243 MFSD1Q9H3U5 465 aa22.59■■□□□ 1.21
SDCBP-209ENST00000522243 EPS15L1Q9UBC2 864 aa22.59■■□□□ 1.21
SDCBP-209ENST00000522243 FBXO2Q9UK22 296 aaPredicted RBP22.59■■□□□ 1.21
SDCBP-209ENST00000522243 DUSP12Q9UNI6 340 aa22.59■■□□□ 1.21
SDCBP-209ENST00000522243 MUC6Q6W4X9 2439 aa22.58■■□□□ 1.21
SDCBP-209ENST00000522243 HNRNPDLO14979 420 aaKnown RBP22.58■■□□□ 1.21
SDCBP-209ENST00000522243 TBCAO75347 108 aaKnown RBP22.58■■□□□ 1.21
SDCBP-209ENST00000522243 HNRNPA1P09651 372 aaKnown RBP eCLIP22.58■■□□□ 1.21
SDCBP-209ENST00000522243 LAMP2P13473 410 aa22.58■■□□□ 1.21
SDCBP-209ENST00000522243 NMT1P30419 496 aaKnown RBP22.58■■□□□ 1.21
SDCBP-209ENST00000522243 ARPP19P56211 112 aa22.58■■□□□ 1.21
SDCBP-209ENST00000522243 TCF15Q12870 199 aa22.58■■□□□ 1.21
SDCBP-209ENST00000522243 ZBTB41Q5SVQ8 909 aa22.58■■□□□ 1.21
SDCBP-209ENST00000522243 TRIOO75962 3097 aa22.58■■□□□ 1.2
SDCBP-209ENST00000522243 CLTAP09496 248 aa22.57■■□□□ 1.2
SDCBP-209ENST00000522243 MCM4P33991 863 aa22.57■■□□□ 1.2
SDCBP-209ENST00000522243 DDIT3P35638 169 aa22.57■■□□□ 1.2
SDCBP-209ENST00000522243 PTPN5P54829 565 aa22.57■■□□□ 1.2
SDCBP-209ENST00000522243 TMEM105Q8N8V8 129 aa22.57■■□□□ 1.2
SDCBP-209ENST00000522243 FLCNQ8NFG4 579 aa22.57■■□□□ 1.2
SDCBP-209ENST00000522243 KIF12Q96FN5 646 aa22.57■■□□□ 1.2
SDCBP-209ENST00000522243 PHOX2BQ99453 314 aa22.57■■□□□ 1.2
SDCBP-209ENST00000522243 PRRX2Q99811 253 aa22.57■■□□□ 1.2
SDCBP-209ENST00000522243 HCFC1R1Q9NWW0 138 aa22.57■■□□□ 1.2
SDCBP-209ENST00000522243 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.57■■□□□ 1.2
SDCBP-209ENST00000522243 FBXL21Q9UKT6 434 aa22.57■■□□□ 1.2
SDCBP-209ENST00000522243 MTMR6Q9Y217 621 aa22.57■■□□□ 1.2
SDCBP-209ENST00000522243 TTC26A0AVF1 554 aa22.56■■□□□ 1.2
SDCBP-209ENST00000522243 K7ELQ4 463 aaPredicted RBP22.56■■□□□ 1.2
SDCBP-209ENST00000522243 XYLBO75191 536 aa22.56■■□□□ 1.2
SDCBP-209ENST00000522243 CFHP08603 1231 aa22.56■■□□□ 1.2
SDCBP-209ENST00000522243 HOXA9P31269 272 aa22.56■■□□□ 1.2
SDCBP-209ENST00000522243 ROR1Q01973 937 aa22.56■■□□□ 1.2
SDCBP-209ENST00000522243 ZC2HC1CQ53FD0 456 aaPredicted RBP22.56■■□□□ 1.2
SDCBP-209ENST00000522243 DYMQ7RTS9 669 aa22.56■■□□□ 1.2
SDCBP-209ENST00000522243 SLC44A3Q8N4M1 653 aa22.56■■□□□ 1.2
SDCBP-209ENST00000522243 KCNN1Q92952 543 aa22.56■■□□□ 1.2
SDCBP-209ENST00000522243 INTS4Q96HW7 963 aaKnown RBP22.56■■□□□ 1.2
SDCBP-209ENST00000522243 FIZ1Q96SL8 496 aa22.56■■□□□ 1.2
SDCBP-209ENST00000522243 PLEKHA5Q9HAU0 1116 aa22.56■■□□□ 1.2
SDCBP-209ENST00000522243 CCDC39Q9UFE4 941 aa22.56■■□□□ 1.2
SDCBP-209ENST00000522243 SRPRBQ9Y5M8 271 aaKnown RBP22.56■■□□□ 1.2
SDCBP-209ENST00000522243 WDR27A2RRH5 827 aa22.55■■□□□ 1.2
SDCBP-209ENST00000522243 LACTBL1A8MY62 500 aa22.55■■□□□ 1.2
SDCBP-209ENST00000522243 SYN3O14994 580 aa22.55■■□□□ 1.2
SDCBP-209ENST00000522243 PIGRP01833 764 aa22.55■■□□□ 1.2
SDCBP-209ENST00000522243 MRE11P49959 708 aa22.55■■□□□ 1.2
SDCBP-209ENST00000522243 GUCY2FP51841 1108 aa22.55■■□□□ 1.2
SDCBP-209ENST00000522243 PPP2R3AQ06190 1150 aa22.55■■□□□ 1.2
SDCBP-209ENST00000522243 UVSSAQ2YD98 709 aa22.55■■□□□ 1.2
SDCBP-209ENST00000522243 SLC39A4Q6P5W5 647 aa22.55■■□□□ 1.2
SDCBP-209ENST00000522243 KRI1Q8N9T8 703 aaKnown RBP22.55■■□□□ 1.2
SDCBP-209ENST00000522243 FAM212AQ96EL1 285 aa22.55■■□□□ 1.2
SDCBP-209ENST00000522243 SUSD3Q96L08 255 aa22.55■■□□□ 1.2
SDCBP-209ENST00000522243 USP28Q96RU2 1077 aa22.55■■□□□ 1.2
SDCBP-209ENST00000522243 RPF1Q9H9Y2 349 aaKnown RBP22.55■■□□□ 1.2
SDCBP-209ENST00000522243 DNMT3BQ9UBC3 853 aaKnown RBP22.55■■□□□ 1.2
SDCBP-209ENST00000522243 NOTCH4Q99466 2003 aa22.54■■□□□ 1.2
SDCBP-209ENST00000522243 ANKRD63C9JTQ0 380 aa22.54■■□□□ 1.2
SDCBP-209ENST00000522243 H7C4K7 107 aa22.54■■□□□ 1.2
SDCBP-209ENST00000522243 OGTO15294 1046 aa22.54■■□□□ 1.2
SDCBP-209ENST00000522243 GTF2BQ00403 316 aa22.54■■□□□ 1.2
SDCBP-209ENST00000522243 ENOX2Q16206 610 aaKnown RBP22.54■■□□□ 1.2
SDCBP-209ENST00000522243 CTXN3Q4LDR2 81 aa22.54■■□□□ 1.2
SDCBP-209ENST00000522243 RRAGBQ5VZM2 374 aa22.54■■□□□ 1.2
SDCBP-209ENST00000522243 CWF19L1Q69YN2 538 aaKnown RBP22.54■■□□□ 1.2
SDCBP-209ENST00000522243 ASTLQ6HA08 431 aaPredicted RBP22.54■■□□□ 1.2
SDCBP-209ENST00000522243 SLC8B1Q6J4K2 584 aa22.54■■□□□ 1.2
SDCBP-209ENST00000522243 SIX5Q8N196 739 aa22.54■■□□□ 1.2
SDCBP-209ENST00000522243 ZNF461Q8TAF7 563 aa22.54■■□□□ 1.2
SDCBP-209ENST00000522243 ITFG1Q8TB96 612 aa22.54■■□□□ 1.2
SDCBP-209ENST00000522243 DDX12PQ92771 950 aa22.54■■□□□ 1.2
SDCBP-209ENST00000522243 MSTO1Q9BUK6 570 aa22.54■■□□□ 1.2
SDCBP-209ENST00000522243 FAM86C1Q9NVL1 165 aa22.54■■□□□ 1.2
SDCBP-209ENST00000522243 FBXL5Q9UKA1 691 aa22.54■■□□□ 1.2
SDCBP-209ENST00000522243 CDH7Q9ULB5 785 aa22.54■■□□□ 1.2
SDCBP-209ENST00000522243 UBQLN1Q9UMX0 589 aaKnown RBP22.54■■□□□ 1.2
SDCBP-209ENST00000522243 NUMBLQ9Y6R0 609 aa22.54■■□□□ 1.2
SDCBP-209ENST00000522243 TISP43B9A030 160 aa22.53■■□□□ 1.2
SDCBP-209ENST00000522243 FAM189A1O60320 539 aa22.53■■□□□ 1.2
SDCBP-209ENST00000522243 TBC1D4O60343 1298 aa22.53■■□□□ 1.2
SDCBP-209ENST00000522243 NPR3P17342 541 aa22.53■■□□□ 1.2
SDCBP-209ENST00000522243 ELF1P32519 619 aa22.53■■□□□ 1.2
SDCBP-209ENST00000522243 HTR4Q13639 388 aa22.53■■□□□ 1.2
SDCBP-209ENST00000522243 MRPL58Q14197 206 aaKnown RBP22.53■■□□□ 1.2
SDCBP-209ENST00000522243 ZBTB6Q15916 424 aa22.53■■□□□ 1.2
SDCBP-209ENST00000522243 SFR1Q86XK3 245 aa22.53■■□□□ 1.2
SDCBP-209ENST00000522243 FGF13Q92913 245 aa22.53■■□□□ 1.2
SDCBP-209ENST00000522243 NXPE3Q969Y0 559 aa22.53■■□□□ 1.2
SDCBP-209ENST00000522243 RPP25Q9BUL9 199 aaKnown RBP22.53■■□□□ 1.2
SDCBP-209ENST00000522243 PANK2Q9BZ23 570 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms