RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 INPPL1O15357 1258 aa14.09□□□□□ -0.15
CPNE3-205ENST00000522240 TIMP1P01033 207 aa14.09□□□□□ -0.15
CPNE3-205ENST00000522240 HLA-DRAP01903 254 aa14.09□□□□□ -0.15
CPNE3-205ENST00000522240 ATF7P17544 494 aaPredicted RBP14.09□□□□□ -0.15
CPNE3-205ENST00000522240 SLC9A1P19634 815 aa14.09□□□□□ -0.15
CPNE3-205ENST00000522240 CYP2C18P33260 490 aa14.09□□□□□ -0.15
CPNE3-205ENST00000522240 CCL23P55773 120 aa14.09□□□□□ -0.15
CPNE3-205ENST00000522240 TFAMQ00059 246 aaKnown RBP14.09□□□□□ -0.15
CPNE3-205ENST00000522240 BIRC3Q13489 604 aa14.09□□□□□ -0.15
CPNE3-205ENST00000522240 ARID5BQ14865 1188 aa14.09□□□□□ -0.15
CPNE3-205ENST00000522240 KLHDC7AQ5VTJ3 777 aa14.09□□□□□ -0.15
CPNE3-205ENST00000522240 SLC24A5Q71RS6 500 aa14.09□□□□□ -0.15
CPNE3-205ENST00000522240 TRAPPC11Q7Z392 1133 aa14.09□□□□□ -0.15
CPNE3-205ENST00000522240 ZNF598Q86UK7 904 aaKnown RBP14.09□□□□□ -0.15
CPNE3-205ENST00000522240 EHBP1Q8NDI1 1231 aa14.09□□□□□ -0.15
CPNE3-205ENST00000522240 DBF4BQ8NFT6 615 aa14.09□□□□□ -0.15
CPNE3-205ENST00000522240 TAS1R2Q8TE23 839 aa14.09□□□□□ -0.15
CPNE3-205ENST00000522240 SCLYQ96I15 445 aa14.09□□□□□ -0.15
CPNE3-205ENST00000522240 FAM81BQ96LP2 452 aa14.09□□□□□ -0.15
CPNE3-205ENST00000522240 APOL6Q9BWW8 343 aa14.09□□□□□ -0.15
CPNE3-205ENST00000522240 SIX2Q9NPC8 291 aa14.09□□□□□ -0.15
CPNE3-205ENST00000522240 APEX2Q9UBZ4 518 aa14.09□□□□□ -0.15
CPNE3-205ENST00000522240 PARP2Q9UGN5 583 aa14.09□□□□□ -0.15
CPNE3-205ENST00000522240 ITGA11Q9UKX5 1188 aa14.09□□□□□ -0.15
CPNE3-205ENST00000522240 CAPN11Q9UMQ6 739 aa14.09□□□□□ -0.15
CPNE3-205ENST00000522240 DNAH12Q6ZR08 3092 aa14.09□□□□□ -0.15
CPNE3-205ENST00000522240 CUL9Q8IWT3 2517 aa14.09□□□□□ -0.15
CPNE3-205ENST00000522240 MICAL3Q7RTP6 2002 aa14.08□□□□□ -0.15
CPNE3-205ENST00000522240 A0A0C4DFX4 3053 aa14.08□□□□□ -0.16
CPNE3-205ENST00000522240 AKR1B15C9JRZ8 316 aaPredicted RBP14.08□□□□□ -0.16
CPNE3-205ENST00000522240 NOL4O94818 638 aa14.08□□□□□ -0.16
CPNE3-205ENST00000522240 VNN1O95497 513 aa14.08□□□□□ -0.16
CPNE3-205ENST00000522240 EOMESO95936 686 aa14.08□□□□□ -0.16
CPNE3-205ENST00000522240 PFKMP08237 780 aa14.08□□□□□ -0.16
CPNE3-205ENST00000522240 CYP3A5P20815 502 aa14.08□□□□□ -0.16
CPNE3-205ENST00000522240 AKAP5P24588 427 aa14.08□□□□□ -0.16
CPNE3-205ENST00000522240 CASP14P31944 242 aa14.08□□□□□ -0.16
CPNE3-205ENST00000522240 ZBED6P86452 979 aa14.08□□□□□ -0.16
CPNE3-205ENST00000522240 NCOA4Q13772 614 aa14.08□□□□□ -0.16
CPNE3-205ENST00000522240 ZBTB6Q15916 424 aa14.08□□□□□ -0.16
CPNE3-205ENST00000522240 CNKSR3Q6P9H4 555 aa14.08□□□□□ -0.16
CPNE3-205ENST00000522240 CCDC186Q7Z3E2 898 aa14.08□□□□□ -0.16
CPNE3-205ENST00000522240 C1orf127Q8N9H9 656 aa14.08□□□□□ -0.16
CPNE3-205ENST00000522240 ZNF397Q8NF99 534 aaPredicted RBP14.08□□□□□ -0.16
CPNE3-205ENST00000522240 BEST2Q8NFU1 509 aa14.08□□□□□ -0.16
CPNE3-205ENST00000522240 RSPH1Q8WYR4 309 aa14.08□□□□□ -0.16
CPNE3-205ENST00000522240 TAF4BQ92750 862 aa14.08□□□□□ -0.16
CPNE3-205ENST00000522240 RPS6KC1Q96S38 1066 aa14.08□□□□□ -0.16
CPNE3-205ENST00000522240 IMPG2Q9BZV3 1241 aa14.08□□□□□ -0.16
CPNE3-205ENST00000522240 ELAC1Q9H777 363 aaKnown RBP14.08□□□□□ -0.16
CPNE3-205ENST00000522240 RSAD1Q9HA92 442 aa14.08□□□□□ -0.16
CPNE3-205ENST00000522240 PRDM5Q9NQX1 630 aaPredicted RBP14.08□□□□□ -0.16
CPNE3-205ENST00000522240 MYO6Q9UM54 1294 aa14.08□□□□□ -0.16
CPNE3-205ENST00000522240 UBQLN1Q9UMX0 589 aaKnown RBP14.08□□□□□ -0.16
CPNE3-205ENST00000522240 LUC7L2Q9Y383 392 aaKnown RBP14.08□□□□□ -0.16
CPNE3-205ENST00000522240 A0A1W2PPC1 479 aa14.07□□□□□ -0.16
CPNE3-205ENST00000522240 TRIM43BA6NCK2 446 aa14.07□□□□□ -0.16
CPNE3-205ENST00000522240 EPHB6O15197 1021 aa14.07□□□□□ -0.16
CPNE3-205ENST00000522240 PHACTR2O75167 634 aa14.07□□□□□ -0.16
CPNE3-205ENST00000522240 STAU1O95793 577 aaKnown RBP14.07□□□□□ -0.16
CPNE3-205ENST00000522240 ACTN1P12814 892 aa14.07□□□□□ -0.16
CPNE3-205ENST00000522240 UCHL3P15374 230 aa14.07□□□□□ -0.16
CPNE3-205ENST00000522240 RAG1P15918 1043 aa14.07□□□□□ -0.16
CPNE3-205ENST00000522240 FAM189BP81408 668 aa14.07□□□□□ -0.16
CPNE3-205ENST00000522240 MFSD5Q6N075 450 aa14.07□□□□□ -0.16
CPNE3-205ENST00000522240 AGMOQ6ZNB7 445 aa14.07□□□□□ -0.16
CPNE3-205ENST00000522240 ENOSF1Q7L5Y1 443 aa14.07□□□□□ -0.16
CPNE3-205ENST00000522240 CACNA2D4Q7Z3S7 1137 aa14.07□□□□□ -0.16
CPNE3-205ENST00000522240 RTN4RL1Q86UN2 441 aaPredicted RBP14.07□□□□□ -0.16
CPNE3-205ENST00000522240 FMNL3Q8IVF7 1028 aa14.07□□□□□ -0.16
CPNE3-205ENST00000522240 TC2NQ8N9U0 490 aa14.07□□□□□ -0.16
CPNE3-205ENST00000522240 BAP1Q92560 729 aa14.07□□□□□ -0.16
CPNE3-205ENST00000522240 SEMA4DQ92854 862 aa14.07□□□□□ -0.16
CPNE3-205ENST00000522240 TRIM43Q96BQ3 446 aaPredicted RBP14.07□□□□□ -0.16
CPNE3-205ENST00000522240 FAXDC2Q96IV6 333 aa14.07□□□□□ -0.16
CPNE3-205ENST00000522240 ZMAT2Q96NC0 199 aaKnown RBP14.07□□□□□ -0.16
CPNE3-205ENST00000522240 NT5C1BQ96P26 610 aa14.07□□□□□ -0.16
CPNE3-205ENST00000522240 PANX2Q96RD6 677 aa14.07□□□□□ -0.16
CPNE3-205ENST00000522240 NUCKS1Q9H1E3 243 aaKnown RBP14.07□□□□□ -0.16
CPNE3-205ENST00000522240 PRO3102Q9H379 93 aa14.07□□□□□ -0.16
CPNE3-205ENST00000522240 VRTNQ9H8Y1 702 aa14.07□□□□□ -0.16
CPNE3-205ENST00000522240 SLC38A7Q9NVC3 462 aa14.07□□□□□ -0.16
CPNE3-205ENST00000522240 TMEM161AQ9NX61 479 aa14.07□□□□□ -0.16
CPNE3-205ENST00000522240 FHOD1Q9Y613 1164 aa14.07□□□□□ -0.16
CPNE3-205ENST00000522240 LAMA3Q16787 3333 aa14.07□□□□□ -0.16
CPNE3-205ENST00000522240 TRIP11Q15643 1979 aa14.06□□□□□ -0.16
CPNE3-205ENST00000522240 SMIM28A0A1B0GU29 152 aa14.06□□□□□ -0.16
CPNE3-205ENST00000522240 PTGESO14684 152 aa14.06□□□□□ -0.16
CPNE3-205ENST00000522240 ASS1P00966 412 aaKnown RBP14.06□□□□□ -0.16
CPNE3-205ENST00000522240 FECHP22830 423 aa14.06□□□□□ -0.16
CPNE3-205ENST00000522240 ATICP31939 592 aa14.06□□□□□ -0.16
CPNE3-205ENST00000522240 KRT9P35527 623 aa14.06□□□□□ -0.16
CPNE3-205ENST00000522240 MLH1P40692 756 aa14.06□□□□□ -0.16
CPNE3-205ENST00000522240 POLR2FP61218 127 aaKnown RBP14.06□□□□□ -0.16
CPNE3-205ENST00000522240 NOP14P78316 857 aaKnown RBP14.06□□□□□ -0.16
CPNE3-205ENST00000522240 GCNT1Q02742 428 aa14.06□□□□□ -0.16
CPNE3-205ENST00000522240 TRPC3Q13507 836 aa14.06□□□□□ -0.16
CPNE3-205ENST00000522240 HS1BP3Q53T59 392 aa14.06□□□□□ -0.16
CPNE3-205ENST00000522240 WDR44Q5JSH3 913 aa14.06□□□□□ -0.16
CPNE3-205ENST00000522240 TMEM199Q8N511 208 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms