RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 PPM1JQ5JR12 505 aa11.85□□□□□ -0.51
MRPS28-208ENST00000521605 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.85□□□□□ -0.51
MRPS28-208ENST00000521605 FILIP1Q7Z7B0 1213 aa11.85□□□□□ -0.51
MRPS28-208ENST00000521605 SMAP1Q8IYB5 467 aaPredicted RBP11.85□□□□□ -0.51
MRPS28-208ENST00000521605 CSGALNACT2Q8N6G5 542 aa11.85□□□□□ -0.51
MRPS28-208ENST00000521605 GPR161Q8N6U8 529 aaKnown RBP11.85□□□□□ -0.51
MRPS28-208ENST00000521605 SECISBP2LQ93073 1101 aaKnown RBP11.85□□□□□ -0.51
MRPS28-208ENST00000521605 PANX2Q96RD6 677 aa11.85□□□□□ -0.51
MRPS28-208ENST00000521605 TSG101Q99816 390 aa11.85□□□□□ -0.51
MRPS28-208ENST00000521605 NAA15Q9BXJ9 866 aaKnown RBP11.85□□□□□ -0.51
MRPS28-208ENST00000521605 UNC45AQ9H3U1 944 aa11.85□□□□□ -0.51
MRPS28-208ENST00000521605 ZSWIM4Q9H7M6 989 aa11.85□□□□□ -0.51
MRPS28-208ENST00000521605 SPATA6Q9NWH7 488 aaPredicted RBP11.85□□□□□ -0.51
MRPS28-208ENST00000521605 MAGEC2Q9UBF1 373 aaPredicted RBP11.85□□□□□ -0.51
MRPS28-208ENST00000521605 SLC9A2Q9UBY0 812 aa11.85□□□□□ -0.51
MRPS28-208ENST00000521605 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.85□□□□□ -0.518e-8■■□□□ 11.5
MRPS28-208ENST00000521605 LGALS16A8MUM7 142 aa11.84□□□□□ -0.51
MRPS28-208ENST00000521605 WDR64B1ANS9 1081 aa11.84□□□□□ -0.51
MRPS28-208ENST00000521605 EIF3DO15371 548 aaKnown RBP eCLIP11.84□□□□□ -0.51
MRPS28-208ENST00000521605 SSBP05455 408 aaKnown RBP eCLIP11.84□□□□□ -0.51
MRPS28-208ENST00000521605 TPM2P07951 284 aa11.84□□□□□ -0.51
MRPS28-208ENST00000521605 CTSAP10619 480 aa11.84□□□□□ -0.51
MRPS28-208ENST00000521605 ZSCAN20P17040 1043 aaPredicted RBP11.84□□□□□ -0.51
MRPS28-208ENST00000521605 SCP2P22307 547 aa11.84□□□□□ -0.51
MRPS28-208ENST00000521605 KLRC2P26717 231 aa11.84□□□□□ -0.51
MRPS28-208ENST00000521605 DNM2P50570 870 aa11.84□□□□□ -0.51
MRPS28-208ENST00000521605 CRYBB1P53674 252 aaPredicted RBP11.84□□□□□ -0.51
MRPS28-208ENST00000521605 STX17P56962 302 aa11.84□□□□□ -0.51
MRPS28-208ENST00000521605 ACTR2P61160 394 aa11.84□□□□□ -0.51
MRPS28-208ENST00000521605 CSTF1Q05048 431 aaKnown RBP11.84□□□□□ -0.51
MRPS28-208ENST00000521605 ALCAMQ13740 583 aa11.84□□□□□ -0.51
MRPS28-208ENST00000521605 ARID5BQ14865 1188 aa11.84□□□□□ -0.51
MRPS28-208ENST00000521605 NOLC1Q14978 699 aaKnown RBP eCLIP11.84□□□□□ -0.51
MRPS28-208ENST00000521605 FIGNQ5HY92 759 aa11.84□□□□□ -0.51
MRPS28-208ENST00000521605 PHLDB3Q6NSJ2 640 aa11.84□□□□□ -0.51
MRPS28-208ENST00000521605 DCLRE1AQ6PJP8 1040 aa11.84□□□□□ -0.51
MRPS28-208ENST00000521605 C1orf186Q6ZWK4 172 aa11.84□□□□□ -0.51
MRPS28-208ENST00000521605 EPM2AIP1Q7L775 607 aaPredicted RBP11.84□□□□□ -0.51
MRPS28-208ENST00000521605 PLPPR4Q7Z2D5 763 aa11.84□□□□□ -0.51
MRPS28-208ENST00000521605 TRMT1LQ7Z2T5 733 aaKnown RBP11.84□□□□□ -0.51
MRPS28-208ENST00000521605 ECHDC2Q86YB7 292 aa11.84□□□□□ -0.51
MRPS28-208ENST00000521605 C4orf19Q8IY42 314 aa11.84□□□□□ -0.51
MRPS28-208ENST00000521605 PJA1Q8NG27 643 aa11.84□□□□□ -0.51
MRPS28-208ENST00000521605 ATRIPQ8WXE1 791 aa11.84□□□□□ -0.51
MRPS28-208ENST00000521605 KCNN1Q92952 543 aa11.84□□□□□ -0.51
MRPS28-208ENST00000521605 ANKEF1Q9NU02 776 aa11.84□□□□□ -0.51
MRPS28-208ENST00000521605 TCEAL9Q9UHQ7 104 aa11.84□□□□□ -0.51
MRPS28-208ENST00000521605 SMG5Q9UPR3 1016 aaKnown RBP11.84□□□□□ -0.51
MRPS28-208ENST00000521605 TRAF3IP3Q9Y228 551 aa11.84□□□□□ -0.51
MRPS28-208ENST00000521605 ATRXP46100 2492 aa11.84□□□□□ -0.51
MRPS28-208ENST00000521605 BACH1O14867 736 aa11.83□□□□□ -0.52
MRPS28-208ENST00000521605 SPTLC1O15269 473 aa11.83□□□□□ -0.52
MRPS28-208ENST00000521605 LAMTOR5O43504 91 aa11.83□□□□□ -0.52
MRPS28-208ENST00000521605 STX10O60499 249 aa11.83□□□□□ -0.52
MRPS28-208ENST00000521605 SKILP12757 684 aa11.83□□□□□ -0.52
MRPS28-208ENST00000521605 HOXB3P14651 431 aaPredicted RBP11.83□□□□□ -0.52
MRPS28-208ENST00000521605 QARSP47897 775 aaKnown RBP11.83□□□□□ -0.52
MRPS28-208ENST00000521605 FKBP3Q00688 224 aaKnown RBP11.83□□□□□ -0.52
MRPS28-208ENST00000521605 PPP2R3AQ06190 1150 aa11.83□□□□□ -0.52
MRPS28-208ENST00000521605 ITGB3BPQ13352 177 aaPredicted RBP11.83□□□□□ -0.52
MRPS28-208ENST00000521605 ANKRD40Q6AI12 368 aa11.83□□□□□ -0.52
MRPS28-208ENST00000521605 RINT1Q6NUQ1 792 aa11.83□□□□□ -0.52
MRPS28-208ENST00000521605 ARMCX5Q6P1M9 558 aa11.83□□□□□ -0.52
MRPS28-208ENST00000521605 STXBP4Q6ZWJ1 553 aa11.83□□□□□ -0.52
MRPS28-208ENST00000521605 PPFIBP1Q86W92 1011 aa11.83□□□□□ -0.52
MRPS28-208ENST00000521605 CNGA4Q8IV77 575 aa11.83□□□□□ -0.52
MRPS28-208ENST00000521605 METTL13Q8N6R0 699 aa11.83□□□□□ -0.52
MRPS28-208ENST00000521605 ZNF507Q8TCN5 953 aa11.83□□□□□ -0.52
MRPS28-208ENST00000521605 BCL7CQ8WUZ0 217 aaPredicted RBP11.83□□□□□ -0.52
MRPS28-208ENST00000521605 GJA10Q969M2 543 aa11.83□□□□□ -0.52
MRPS28-208ENST00000521605 ZNF668Q96K58 619 aaPredicted RBP11.83□□□□□ -0.52
MRPS28-208ENST00000521605 MYADMQ96S97 322 aa11.83□□□□□ -0.52
MRPS28-208ENST00000521605 NUP58Q9BVL2 599 aa11.83□□□□□ -0.52
MRPS28-208ENST00000521605 SRRTQ9BXP5 876 aaKnown RBP11.83□□□□□ -0.52
MRPS28-208ENST00000521605 BHMT2Q9H2M3 363 aa11.83□□□□□ -0.52
MRPS28-208ENST00000521605 COL4A3Q01955 1670 aa11.83□□□□□ -0.52
MRPS28-208ENST00000521605 KIF2AO00139 706 aaPredicted RBP11.82□□□□□ -0.52
MRPS28-208ENST00000521605 DDX39AO00148 427 aaKnown RBP11.82□□□□□ -0.52
MRPS28-208ENST00000521605 PDXKO00764 312 aa11.82□□□□□ -0.52
MRPS28-208ENST00000521605 N4BP3O15049 544 aa11.82□□□□□ -0.52
MRPS28-208ENST00000521605 ARHGAP6O43182 974 aa11.82□□□□□ -0.52
MRPS28-208ENST00000521605 TBCAO75347 108 aaKnown RBP11.82□□□□□ -0.52
MRPS28-208ENST00000521605 KRT18P05783 430 aaKnown RBP11.82□□□□□ -0.52
MRPS28-208ENST00000521605 TPM1P09493 284 aa11.82□□□□□ -0.52
MRPS28-208ENST00000521605 IDEP14735 1019 aa11.82□□□□□ -0.52
MRPS28-208ENST00000521605 ABCD1P33897 745 aa11.82□□□□□ -0.52
MRPS28-208ENST00000521605 CLCN4P51793 760 aa11.82□□□□□ -0.52
MRPS28-208ENST00000521605 PMS1P54277 932 aaKnown RBP11.82□□□□□ -0.52
MRPS28-208ENST00000521605 SNRPFP62306 86 aaKnown RBP11.82□□□□□ -0.52
MRPS28-208ENST00000521605 DMWDQ09019 674 aa11.82□□□□□ -0.52
MRPS28-208ENST00000521605 MYBPC2Q14324 1141 aa11.82□□□□□ -0.52
MRPS28-208ENST00000521605 C15orf39Q6ZRI6 1047 aa11.82□□□□□ -0.52
MRPS28-208ENST00000521605 FAM43BQ6ZT52 329 aaPredicted RBP11.82□□□□□ -0.52
MRPS28-208ENST00000521605 DYMQ7RTS9 669 aa11.82□□□□□ -0.52
MRPS28-208ENST00000521605 MIER3Q7Z3K6 550 aa11.82□□□□□ -0.52
MRPS28-208ENST00000521605 DDX53Q86TM3 631 aaKnown RBP11.82□□□□□ -0.52
MRPS28-208ENST00000521605 GOLGA5Q8TBA6 731 aa11.82□□□□□ -0.52
MRPS28-208ENST00000521605 IGSF21Q96ID5 467 aa11.82□□□□□ -0.52
MRPS28-208ENST00000521605 DYDC2Q96IM9 177 aa11.82□□□□□ -0.52
MRPS28-208ENST00000521605 KLHL5Q96PQ7 755 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms