RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 ABHD16AO95870 558 aa4.27□□□□□ -1.73
VPS13B-209ENST00000521559 CFBP00751 764 aa4.27□□□□□ -1.73
VPS13B-209ENST00000521559 VIL1P09327 827 aaKnown RBP4.27□□□□□ -1.73
VPS13B-209ENST00000521559 FLT3LGP49771 235 aa4.27□□□□□ -1.73
VPS13B-209ENST00000521559 SLC5A3P53794 718 aa4.27□□□□□ -1.73
VPS13B-209ENST00000521559 MXRA7P84157 204 aa4.27□□□□□ -1.73
VPS13B-209ENST00000521559 TMPRSS15P98073 1019 aa4.27□□□□□ -1.73
VPS13B-209ENST00000521559 CDK17Q00537 523 aa4.27□□□□□ -1.73
VPS13B-209ENST00000521559 MUM1L1Q5H9M0 696 aa4.27□□□□□ -1.73
VPS13B-209ENST00000521559 RNF219Q5W0B1 726 aaPredicted RBP4.27□□□□□ -1.73
VPS13B-209ENST00000521559 KCNV1Q6PIU1 500 aa4.27□□□□□ -1.73
VPS13B-209ENST00000521559 LRRC55Q6ZSA7 311 aa4.27□□□□□ -1.73
VPS13B-209ENST00000521559 GDF7Q7Z4P5 450 aa4.27□□□□□ -1.73
VPS13B-209ENST00000521559 MRGPREQ86SM8 312 aa4.27□□□□□ -1.73
VPS13B-209ENST00000521559 SPATS2Q86XZ4 545 aaKnown RBP4.27□□□□□ -1.73
VPS13B-209ENST00000521559 WDR66Q8TBY9 1149 aa4.27□□□□□ -1.73
VPS13B-209ENST00000521559 PROKR1Q8TCW9 393 aa4.27□□□□□ -1.73
VPS13B-209ENST00000521559 RIN2Q8WYP3 895 aaPredicted RBP4.27□□□□□ -1.73
VPS13B-209ENST00000521559 TFAP2CQ92754 450 aa4.27□□□□□ -1.73
VPS13B-209ENST00000521559 AHCYL2Q96HN2 611 aaKnown RBP4.27□□□□□ -1.73
VPS13B-209ENST00000521559 PRAM1Q96QH2 718 aa4.27□□□□□ -1.73
VPS13B-209ENST00000521559 CPEB1Q9BZB8 566 aaKnown RBP4.27□□□□□ -1.73
VPS13B-209ENST00000521559 PRDM12Q9H4Q4 367 aa4.27□□□□□ -1.73
VPS13B-209ENST00000521559 IFT122Q9HBG6 1241 aa4.27□□□□□ -1.73
VPS13B-209ENST00000521559 EDARQ9UNE0 448 aa4.27□□□□□ -1.73
VPS13B-209ENST00000521559 NCOA3Q9Y6Q9 1424 aa4.27□□□□□ -1.73
VPS13B-209ENST00000521559 STRCQ7RTU9 1775 aa4.27□□□□□ -1.73
VPS13B-209ENST00000521559 DIP2AQ14689 1571 aa4.27□□□□□ -1.73
VPS13B-209ENST00000521559 TMEM94Q12767 1356 aa4.27□□□□□ -1.73
VPS13B-209ENST00000521559 PJA2O43164 708 aa4.26□□□□□ -1.73
VPS13B-209ENST00000521559 HLA-DOAP06340 250 aa4.26□□□□□ -1.73
VPS13B-209ENST00000521559 SNRPA1P09661 255 aaKnown RBP4.26□□□□□ -1.73
VPS13B-209ENST00000521559 ECHS1P30084 290 aa4.26□□□□□ -1.73
VPS13B-209ENST00000521559 PTPN7P35236 360 aa4.26□□□□□ -1.73
VPS13B-209ENST00000521559 SCAND1P57086 179 aa4.26□□□□□ -1.73
VPS13B-209ENST00000521559 INHBEP58166 350 aa4.26□□□□□ -1.73
VPS13B-209ENST00000521559 TAP1Q03518 808 aa4.26□□□□□ -1.73
VPS13B-209ENST00000521559 SMN1Q16637 294 aaKnown RBP4.26□□□□□ -1.73
VPS13B-209ENST00000521559 BMT2Q1RMZ1 405 aa4.26□□□□□ -1.73
VPS13B-209ENST00000521559 MUM1Q2TAK8 710 aa4.26□□□□□ -1.73
VPS13B-209ENST00000521559 MST1LQ2TV78 715 aa4.26□□□□□ -1.73
VPS13B-209ENST00000521559 FAM47AQ5JRC9 791 aa4.26□□□□□ -1.73
VPS13B-209ENST00000521559 LAIR1Q6GTX8 287 aa4.26□□□□□ -1.73
VPS13B-209ENST00000521559 RHOUQ7L0Q8 258 aa4.26□□□□□ -1.73
VPS13B-209ENST00000521559 XYLT1Q86Y38 959 aa4.26□□□□□ -1.73
VPS13B-209ENST00000521559 LDLRAD3Q86YD5 345 aa4.26□□□□□ -1.73
VPS13B-209ENST00000521559 PLXDC1Q8IUK5 500 aa4.26□□□□□ -1.73
VPS13B-209ENST00000521559 OR10H5Q8NGA6 315 aa4.26□□□□□ -1.73
VPS13B-209ENST00000521559 ATL2Q8NHH9 583 aa4.26□□□□□ -1.73
VPS13B-209ENST00000521559 MDM1Q8TC05 714 aa4.26□□□□□ -1.73
VPS13B-209ENST00000521559 MYEOVQ96EZ4 313 aa4.26□□□□□ -1.73
VPS13B-209ENST00000521559 ORAI2Q96SN7 254 aa4.26□□□□□ -1.73
VPS13B-209ENST00000521559 ACE2Q9BYF1 805 aaPredicted RBP4.26□□□□□ -1.73
VPS13B-209ENST00000521559 QRSL1Q9H0R6 528 aaKnown RBP4.26□□□□□ -1.73
VPS13B-209ENST00000521559 IKZF4Q9H2S9 585 aa4.26□□□□□ -1.73
VPS13B-209ENST00000521559 GREM2Q9H772 168 aa4.26□□□□□ -1.73
VPS13B-209ENST00000521559 BCO1Q9HAY6 547 aa4.26□□□□□ -1.73
VPS13B-209ENST00000521559 RBM12Q9NTZ6 932 aaKnown RBP4.26□□□□□ -1.73
VPS13B-209ENST00000521559 TRPM5Q9NZQ8 1165 aa4.26□□□□□ -1.73
VPS13B-209ENST00000521559 TECPR2O15040 1411 aa4.26□□□□□ -1.73
VPS13B-209ENST00000521559 FAM135BQ49AJ0 1406 aa4.26□□□□□ -1.73
VPS13B-209ENST00000521559 PLEKHH1Q9ULM0 1364 aa4.26□□□□□ -1.73
VPS13B-209ENST00000521559 CPS1P31327 1500 aa4.26□□□□□ -1.73
VPS13B-209ENST00000521559 KIF1BO60333 1816 aa4.25□□□□□ -1.73
VPS13B-209ENST00000521559 WASHC2AQ641Q2 1341 aa4.25□□□□□ -1.73
VPS13B-209ENST00000521559 CENPJQ9HC77 1338 aaPredicted RBP4.25□□□□□ -1.73
VPS13B-209ENST00000521559 NKTRP30414 1462 aaKnown RBP4.25□□□□□ -1.73
VPS13B-209ENST00000521559 RALGAPBQ86X10 1494 aa4.25□□□□□ -1.73
VPS13B-209ENST00000521559 LTBP4Q8N2S1 1624 aa4.25□□□□□ -1.73
VPS13B-209ENST00000521559 ADGRB1O14514 1584 aa4.25□□□□□ -1.73
VPS13B-209ENST00000521559 FOXN1O15353 648 aa4.25□□□□□ -1.73
VPS13B-209ENST00000521559 GPR39O43194 453 aa4.25□□□□□ -1.73
VPS13B-209ENST00000521559 TOM1O60784 492 aa4.25□□□□□ -1.73
VPS13B-209ENST00000521559 EYA4O95677 639 aa4.25□□□□□ -1.73
VPS13B-209ENST00000521559 IL2RBP14784 551 aa4.25□□□□□ -1.73
VPS13B-209ENST00000521559 ATF3P18847 181 aa4.25□□□□□ -1.73
VPS13B-209ENST00000521559 CANXP27824 592 aaKnown RBP4.25□□□□□ -1.73
VPS13B-209ENST00000521559 ADSLP30566 484 aaPredicted RBP4.25□□□□□ -1.73
VPS13B-209ENST00000521559 APOBEC3AP31941 199 aaPredicted RBP4.25□□□□□ -1.73
VPS13B-209ENST00000521559 PER3P56645 1201 aa4.25□□□□□ -1.73
VPS13B-209ENST00000521559 CLRN1P58418 232 aa4.25□□□□□ -1.73
VPS13B-209ENST00000521559 PTCH1Q13635 1447 aa4.25□□□□□ -1.73
VPS13B-209ENST00000521559 ADRM1Q16186 407 aa4.25□□□□□ -1.73
VPS13B-209ENST00000521559 CRB2Q5IJ48 1285 aa4.25□□□□□ -1.73
VPS13B-209ENST00000521559 PRAMEF14Q5SWL7 426 aa4.25□□□□□ -1.73
VPS13B-209ENST00000521559 ARMC6Q6NXE6 501 aa4.25□□□□□ -1.73
VPS13B-209ENST00000521559 ZNF627Q7L945 461 aa4.25□□□□□ -1.73
VPS13B-209ENST00000521559 LILRA3Q8N6C8 439 aaPredicted RBP4.25□□□□□ -1.73
VPS13B-209ENST00000521559 OR7D4Q8NG98 312 aa4.25□□□□□ -1.73
VPS13B-209ENST00000521559 UHRF1Q96T88 793 aaPredicted RBP4.25□□□□□ -1.73
VPS13B-209ENST00000521559 TTPALQ9BTX7 342 aa4.25□□□□□ -1.73
VPS13B-209ENST00000521559 ADI1Q9BV57 179 aa4.25□□□□□ -1.73
VPS13B-209ENST00000521559 REXO4Q9GZR2 422 aaKnown RBP4.25□□□□□ -1.73
VPS13B-209ENST00000521559 C14orf119Q9NWQ9 140 aa4.25□□□□□ -1.73
VPS13B-209ENST00000521559 MOCS1Q9NZB8 636 aa4.25□□□□□ -1.73
VPS13B-209ENST00000521559 C11orf21Q9P2W6 132 aa4.25□□□□□ -1.73
VPS13B-209ENST00000521559 MCM8Q9UJA3 840 aa4.25□□□□□ -1.73
VPS13B-209ENST00000521559 IQGAP1P46940 1657 aa4.25□□□□□ -1.73
VPS13B-209ENST00000521559 ASXL1Q8IXJ9 1541 aa4.25□□□□□ -1.73
VPS13B-209ENST00000521559 LRRC7Q96NW7 1537 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms