RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 MED16Q9Y2X0 877 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 KCTD3Q9Y597 815 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 PCDHGB3Q9Y5G1 929 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 PMF1-BGLAPU3KQ54 211 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 A0A0G2JLL6 359 aaPredicted RBP4.25□□□□□ -1.73
HMGN1P28-201ENST00000521340 PMS2P1A4D2B8 440 aa4.25□□□□□ -1.73
HMGN1P28-201ENST00000521340 F5H423 210 aaPredicted RBP4.25□□□□□ -1.73
HMGN1P28-201ENST00000521340 CYP7B1O75881 506 aa4.25□□□□□ -1.73
HMGN1P28-201ENST00000521340 IL18RAPO95256 599 aa4.25□□□□□ -1.73
HMGN1P28-201ENST00000521340 STT3AP46977 705 aa4.25□□□□□ -1.73
HMGN1P28-201ENST00000521340 ALDH1A3P47895 512 aa4.25□□□□□ -1.73
HMGN1P28-201ENST00000521340 BTKQ06187 659 aa4.25□□□□□ -1.73
HMGN1P28-201ENST00000521340 GALNT1Q10472 559 aaPredicted RBP4.25□□□□□ -1.73
HMGN1P28-201ENST00000521340 ZRSR2Q15696 482 aaKnown RBP4.25□□□□□ -1.73
HMGN1P28-201ENST00000521340 GAGE13Q4V321 117 aa4.25□□□□□ -1.73
HMGN1P28-201ENST00000521340 KLHDC7AQ5VTJ3 777 aa4.25□□□□□ -1.73
HMGN1P28-201ENST00000521340 SEM1Q6ZVN7 128 aa4.25□□□□□ -1.73
HMGN1P28-201ENST00000521340 APBB1IPQ7Z5R6 666 aaPredicted RBP4.25□□□□□ -1.73
HMGN1P28-201ENST00000521340 SH2D3CQ8N5H7 860 aa4.25□□□□□ -1.73
HMGN1P28-201ENST00000521340 FBXO18Q8NFZ0 1043 aa4.25□□□□□ -1.73
HMGN1P28-201ENST00000521340 SLC35B2Q8TB61 432 aa4.25□□□□□ -1.73
HMGN1P28-201ENST00000521340 LPPQ93052 612 aa4.25□□□□□ -1.73
HMGN1P28-201ENST00000521340 DACT3Q96B18 629 aaPredicted RBP4.25□□□□□ -1.73
HMGN1P28-201ENST00000521340 SLC7A6OSQ96CW6 309 aaPredicted RBP4.25□□□□□ -1.73
HMGN1P28-201ENST00000521340 SIGLEC10Q96LC7 697 aa4.25□□□□□ -1.73
HMGN1P28-201ENST00000521340 P2RX7Q99572 595 aaKnown RBP4.25□□□□□ -1.73
HMGN1P28-201ENST00000521340 NDC1Q9BTX1 674 aa4.25□□□□□ -1.73
HMGN1P28-201ENST00000521340 SELENOOQ9BVL4 669 aa4.25□□□□□ -1.73
HMGN1P28-201ENST00000521340 CARD11Q9BXL7 1154 aa4.25□□□□□ -1.73
HMGN1P28-201ENST00000521340 SLC6A15Q9H2J7 730 aa4.25□□□□□ -1.73
HMGN1P28-201ENST00000521340 CASS4Q9NQ75 786 aa4.25□□□□□ -1.73
HMGN1P28-201ENST00000521340 GJB4Q9NTQ9 266 aa4.25□□□□□ -1.73
HMGN1P28-201ENST00000521340 SAGE1Q9NXZ1 904 aa4.25□□□□□ -1.73
HMGN1P28-201ENST00000521340 CDC23Q9UJX2 597 aa4.25□□□□□ -1.73
HMGN1P28-201ENST00000521340 TRIM43BA6NCK2 446 aa4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 POM121BA6NF01 834 aa4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 DAPK3O43293 454 aa4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 PLA2G6O60733 806 aa4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 TRIM13O60858 407 aa4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 SLC43A1O75387 559 aa4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 DNAJB5O75953 348 aa4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 ABHD16AO95870 558 aa4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 JUNP05412 331 aaKnown RBP4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 IL1R1P14778 569 aa4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 GYPEP15421 78 aa4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 VEGFAP15692 232 aaPredicted RBP4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 SLC7A1P30825 629 aa4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 CASRP41180 1078 aa4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 HSPA7P48741 367 aa4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 TCF15Q12870 199 aa4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 DUSP8Q13202 625 aa4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 MRPL49Q13405 166 aaKnown RBP4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 PMS2P11Q13670 270 aa4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 RAPGEF1Q13905 1077 aa4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 KIF22Q14807 665 aa4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 MPEG1Q2M385 716 aa4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 SLC35G1Q2M3R5 365 aa4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 ZNF385BQ569K4 471 aa4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 C3orf38Q5JPI3 329 aa4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 TLDC1Q6P9B6 456 aa4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 GPRIN1Q7Z2K8 1008 aa4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 RSPH3Q86UC2 560 aa4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 TXNDC5Q8NBS9 432 aaKnown RBP4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 GIMAP8Q8ND71 665 aaPredicted RBP4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 MDM1Q8TC05 714 aa4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 TRIM43Q96BQ3 446 aaPredicted RBP4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 BORCS6Q96GS4 357 aa4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 ZCCHC4Q9H5U6 513 aa4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 PRDM16Q9HAZ2 1276 aa4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 MYO1AQ9UBC5 1043 aa4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 CPA4Q9UI42 421 aa4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 GPR52Q9Y2T5 361 aa4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 RBM8AQ9Y5S9 174 aaKnown RBP4.24□□□□□ -1.73
HMGN1P28-201ENST00000521340 A0A1B0GTL3 188 aa4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 A0A1W2PPL8 197 aa4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 C9orf118A6NHY6 69 aa4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 CXorf49A8MYA2 514 aaPredicted RBP4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 GRM6O15303 877 aa4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 THP07101 528 aa4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 IL2RBP14784 551 aa4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 PDIA3P30101 505 aaKnown RBP4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 SARSP49591 514 aaKnown RBP4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 SOX8P57073 446 aa4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 EXOSC9Q06265 439 aaKnown RBP4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 USP10Q14694 798 aaKnown RBP4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 RNF151Q2KHN1 245 aa4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 KHDC1LQ5JSQ8 128 aa4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 TCERG1LQ5VWI1 586 aa4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 AFMIDQ63HM1 303 aa4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 CCDC174Q6PII3 467 aa4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 LDHAL6AQ6ZMR3 332 aa4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 USP30Q70CQ3 517 aa4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 ADGRG2Q8IZP9 1017 aa4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 KLHL36Q8N4N3 616 aa4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 ANKRD42Q8N9B4 389 aa4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 ATP11CQ8NB49 1132 aa4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 PPM1EQ8WY54 764 aa4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 ARL8AQ96BM9 186 aa4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 C18orf8Q96DM3 657 aa4.23□□□□□ -1.73
HMGN1P28-201ENST00000521340 MTFMTQ96DP5 389 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms