RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 HIDE1A8MVS5 230 aa13.41□□□□□ -0.26
CLK4-208ENST00000520957 CCNE1P24864 410 aa13.41□□□□□ -0.26
CLK4-208ENST00000520957 PPM1AP35813 382 aa13.41□□□□□ -0.26
CLK4-208ENST00000520957 BRCC3P46736 316 aa13.41□□□□□ -0.26
CLK4-208ENST00000520957 TTI2Q6NXR4 508 aa13.41□□□□□ -0.26
CLK4-208ENST00000520957 DCLRE1AQ6PJP8 1040 aa13.41□□□□□ -0.26
CLK4-208ENST00000520957 RBM43Q6ZSC3 357 aaKnown RBP13.41□□□□□ -0.26
CLK4-208ENST00000520957 DDX53Q86TM3 631 aaKnown RBP13.41□□□□□ -0.26
CLK4-208ENST00000520957 VPS52Q8N1B4 723 aa13.41□□□□□ -0.26
CLK4-208ENST00000520957 MICALL1Q8N3F8 863 aa13.41□□□□□ -0.26
CLK4-208ENST00000520957 TRIML1Q8N9V2 468 aa13.41□□□□□ -0.26
CLK4-208ENST00000520957 PPM1EQ8WY54 764 aa13.41□□□□□ -0.26
CLK4-208ENST00000520957 MRPL38Q96DV4 380 aaKnown RBP13.41□□□□□ -0.26
CLK4-208ENST00000520957 GAS2L1Q99501 681 aaPredicted RBP13.41□□□□□ -0.26
CLK4-208ENST00000520957 KIAA1586Q9HCI6 787 aa13.41□□□□□ -0.26
CLK4-208ENST00000520957 ADAM28Q9UKQ2 775 aa13.41□□□□□ -0.26
CLK4-208ENST00000520957 UBQLN1Q9UMX0 589 aaKnown RBP13.41□□□□□ -0.26
CLK4-208ENST00000520957 PSMA7O14818 248 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 SPTLC1O15269 473 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 IL18RAPO95256 599 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 FOSL2P15408 326 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 GTF2F1P35269 517 aaKnown RBP eCLIP13.4□□□□□ -0.26
CLK4-208ENST00000520957 POU5F1Q01860 360 aaKnown RBP13.4□□□□□ -0.26
CLK4-208ENST00000520957 PSMD6Q15008 389 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 EDRF1Q3B7T1 1238 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 CCDC183Q5T5S1 534 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 C9orf57Q5W0N0 161 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 TMC7Q7Z402 723 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 ADGRD2Q7Z7M1 963 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 RBM23Q86U06 439 aaKnown RBP13.4□□□□□ -0.26
CLK4-208ENST00000520957 C1orf127Q8N9H9 656 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 CXorf38Q8TB03 319 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 TCF25Q9BQ70 676 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 MTMR12Q9C0I1 747 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 TLR9Q9NR96 1032 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 DPP3Q9NY33 737 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 PUF60Q9UHX1 559 aaKnown RBP13.4□□□□□ -0.26
CLK4-208ENST00000520957 C2CD2Q9Y426 696 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 C2CD2LO14523 706 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 PER2O15055 1255 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 CST3P01034 146 aaPredicted RBP13.4□□□□□ -0.26
CLK4-208ENST00000520957 POU3F3P20264 500 aaPredicted RBP13.4□□□□□ -0.26
CLK4-208ENST00000520957 CYP3A5P20815 502 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 LRPAP1P30533 357 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 RPL9P32969 192 aaKnown RBP13.4□□□□□ -0.26
CLK4-208ENST00000520957 NLRP12P59046 1061 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 MAPK8IP2Q13387 824 aaPredicted RBP13.4□□□□□ -0.26
CLK4-208ENST00000520957 STIM1Q13586 685 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 MYBPC2Q14324 1141 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 NFIL3Q16649 462 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 C1orf220Q5T0J3 134 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 PLPP4Q5VZY2 271 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 FUT10Q6P4F1 479 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 RNF168Q8IYW5 571 aaPredicted RBP13.4□□□□□ -0.26
CLK4-208ENST00000520957 BEST2Q8NFU1 509 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 PARD3BQ8TEW8 1205 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 ELMO3Q96BJ8 720 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 BORCS6Q96GS4 357 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 GTPBP4Q9BZE4 634 aaKnown RBP13.4□□□□□ -0.26
CLK4-208ENST00000520957 INTS13Q9NVM9 706 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 SIX4Q9UIU6 781 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 FRMD4BQ9Y2L6 1034 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 DERAQ9Y315 318 aa13.4□□□□□ -0.26
CLK4-208ENST00000520957 A0A0C4DFX4 3053 aa13.39□□□□□ -0.27
CLK4-208ENST00000520957 ANO9A1A5B4 782 aa13.39□□□□□ -0.27
CLK4-208ENST00000520957 LRRIQ3A6PVS8 624 aaPredicted RBP13.39□□□□□ -0.27
CLK4-208ENST00000520957 PIRO00625 290 aa13.39□□□□□ -0.27
CLK4-208ENST00000520957 FSCN2O14926 492 aa13.39□□□□□ -0.27
CLK4-208ENST00000520957 CETN3O15182 167 aa13.39□□□□□ -0.27
CLK4-208ENST00000520957 CXCL14O95715 111 aa13.39□□□□□ -0.27
CLK4-208ENST00000520957 TNNI1P19237 187 aa13.39□□□□□ -0.27
CLK4-208ENST00000520957 RPL13P26373 211 aaKnown RBP13.39□□□□□ -0.27
CLK4-208ENST00000520957 FKBP3Q00688 224 aaKnown RBP13.39□□□□□ -0.27
CLK4-208ENST00000520957 UBE3AQ05086 875 aa13.39□□□□□ -0.27
CLK4-208ENST00000520957 PAK1Q13153 545 aa13.39□□□□□ -0.27
CLK4-208ENST00000520957 TIGD5Q53EQ6 642 aa13.39□□□□□ -0.27
CLK4-208ENST00000520957 RTP2Q5QGT7 225 aa13.39□□□□□ -0.27
CLK4-208ENST00000520957 FAM171A1Q5VUB5 890 aa13.39□□□□□ -0.27
CLK4-208ENST00000520957 CEP57Q86XR8 500 aa13.39□□□□□ -0.27
CLK4-208ENST00000520957 ZC3H3Q8IXZ2 948 aaKnown RBP13.39□□□□□ -0.27
CLK4-208ENST00000520957 FAM186BQ8IYM0 893 aa13.39□□□□□ -0.27
CLK4-208ENST00000520957 CSGALNACT2Q8N6G5 542 aa13.39□□□□□ -0.27
CLK4-208ENST00000520957 MLKLQ8NB16 471 aa13.39□□□□□ -0.27
CLK4-208ENST00000520957 DDX27Q96GQ7 796 aaKnown RBP13.39□□□□□ -0.27
CLK4-208ENST00000520957 UROC1Q96N76 676 aa13.39□□□□□ -0.27
CLK4-208ENST00000520957 ENTPD7Q9NQZ7 604 aa13.39□□□□□ -0.27
CLK4-208ENST00000520957 LZTS1Q9Y250 596 aa13.39□□□□□ -0.27
CLK4-208ENST00000520957 LILRB3O75022 631 aa13.38□□□□□ -0.27
CLK4-208ENST00000520957 ITGB3P05106 788 aa13.38□□□□□ -0.27
CLK4-208ENST00000520957 TRIM49P0CI25 452 aa13.38□□□□□ -0.27
CLK4-208ENST00000520957 TRIM49CP0CI26 452 aa13.38□□□□□ -0.27
CLK4-208ENST00000520957 POLR2BP30876 1174 aaKnown RBP13.38□□□□□ -0.27
CLK4-208ENST00000520957 CA8P35219 290 aa13.38□□□□□ -0.27
CLK4-208ENST00000520957 PSMC2P35998 433 aaKnown RBP13.38□□□□□ -0.27
CLK4-208ENST00000520957 LILRA4P59901 499 aa13.38□□□□□ -0.27
CLK4-208ENST00000520957 RBM10P98175 930 aaKnown RBP13.38□□□□□ -0.27
CLK4-208ENST00000520957 LRRC63Q05C16 580 aa13.38□□□□□ -0.27
CLK4-208ENST00000520957 NFKBIBQ15653 356 aa13.38□□□□□ -0.27
CLK4-208ENST00000520957 DUOXA2Q1HG44 320 aa13.38□□□□□ -0.27
CLK4-208ENST00000520957 KLHL40Q2TBA0 621 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms