RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 MDH1BQ5I0G3 518 aa13.6□□□□□ -0.23
TRAPPC9-208ENST00000520857 TRAPPC3LQ5T215 181 aa13.6□□□□□ -0.23
TRAPPC9-208ENST00000520857 LIN9Q5TKA1 542 aa13.6□□□□□ -0.23
TRAPPC9-208ENST00000520857 PCNX4Q63HM2 1172 aa13.6□□□□□ -0.23
TRAPPC9-208ENST00000520857 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC9-208ENST00000520857 FGD4Q96M96 766 aa13.6□□□□□ -0.23
TRAPPC9-208ENST00000520857 CRAMP1Q96RY5 1269 aa13.6□□□□□ -0.23
TRAPPC9-208ENST00000520857 OSBPL8Q9BZF1 889 aa13.6□□□□□ -0.23
TRAPPC9-208ENST00000520857 DCLK3Q9C098 648 aa13.6□□□□□ -0.23
TRAPPC9-208ENST00000520857 DCLRE1BQ9H816 532 aa13.6□□□□□ -0.23
TRAPPC9-208ENST00000520857 KRT10P13645 584 aa13.6□□□□□ -0.23
TRAPPC9-208ENST00000520857 ATP6V1C1P21283 382 aa13.6□□□□□ -0.23
TRAPPC9-208ENST00000520857 SERPINB4P48594 390 aa13.6□□□□□ -0.23
TRAPPC9-208ENST00000520857 LMBRD2Q68DH5 695 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC9-208ENST00000520857 TEKT1Q969V4 418 aa13.6□□□□□ -0.23
TRAPPC9-208ENST00000520857 UTP4Q969X6 686 aaKnown RBP13.6□□□□□ -0.23
TRAPPC9-208ENST00000520857 LRMDAQ9H2I8 198 aa13.6□□□□□ -0.23
TRAPPC9-208ENST00000520857 MAP3K7O43318 606 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 ZCCHC18P0CG32 403 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 GZMAP12544 262 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 CDCA2Q69YH5 1023 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 ASRGL1Q7L266 308 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 CBWD2Q8IUF1 395 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 ZSWIM2Q8NEG5 633 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 MAML1Q92585 1016 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 P2RX7Q99572 595 aaKnown RBP13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 TTC1Q99614 292 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 TEKT3Q9BXF9 490 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 TRIM55Q9BYV6 548 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 C12orf65Q9H3J6 166 aaKnown RBP13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 TMEM206Q9H813 350 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 TOPORSQ9NS56 1045 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 IRAK4Q9NWZ3 460 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 HEY2Q9UBP5 337 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 RPS6KA4O75676 772 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 POLR2MP0CAP2 368 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 SREBF1P36956 1147 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 VHLP40337 213 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 SP4Q02446 784 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 CGB2Q6NT52 195 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 PALM2Q8IXS6 379 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 UCMAQ8WVF2 138 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 ACSF2Q96CM8 615 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 FAM161BQ96MY7 647 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 CYP3A7-CYP3A51PA0A087WV96 503 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 ATP9AO75110 1047 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 KRT36O76013 467 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 NDUFB10O96000 172 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 CYP3A7P24462 503 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 SKIV2L2P42285 1042 aaKnown RBP13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 ARFIP2P53365 341 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 FMO1Q01740 532 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 BBS9Q3SYG4 887 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 POMGNT1Q8WZA1 660 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 VTI1AQ96AJ9 217 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 BORCS6Q96GS4 357 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 SYT15Q9BQS2 421 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 EHMT1Q9H9B1 1298 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 PIDD1Q9HB75 910 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 C1orf112Q9NSG2 853 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 RAB20Q9NX57 234 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 SUGT1Q9Y2Z0 365 aa13.59□□□□□ -0.23
TRAPPC9-208ENST00000520857 FSCN2O14926 492 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 ZBED4O75132 1171 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 LMNAP02545 664 aaKnown RBP13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 PTPN4P29074 926 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 TM4SF1P30408 202 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 KPNB1Q14974 876 aaKnown RBP13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 Q4G0T1 1027 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 CFAP157Q5JU67 520 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 RFWD3Q6PCD5 774 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 HAUS6Q7Z4H7 955 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 RBBP8NLQ8NC74 664 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 TUFT1Q9NNX1 390 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 STARD13Q9Y3M8 1113 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 ZMYM2Q9UBW7 1377 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 CCDC22O60826 627 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 KRT1P04264 644 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 ALAS1P13196 640 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 CCNB1P14635 433 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 TNNI1P19237 187 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 NR1H3Q13133 447 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 PTK6Q13882 451 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 ABCB5Q2M3G0 1257 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 PARP6Q2NL67 630 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 DCUN1D2Q6PH85 259 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 MOXD1Q6UVY6 613 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 CEP128Q6ZU80 1094 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 ZFPM1Q8IX07 1006 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 PYROXD1Q8WU10 500 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 DCAF4Q8WV16 495 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 SCG3Q8WXD2 468 aaKnown RBP13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 RBM17Q96I25 401 aaKnown RBP13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 DDX50Q9BQ39 737 aaKnown RBP13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 KIAA1586Q9HCI6 787 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 NMRK1Q9NWW6 199 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 ETAA1Q9NY74 926 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 SERPINA10Q9UK55 444 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 AGTPBP1Q9UPW5 1226 aa13.58□□□□□ -0.24
TRAPPC9-208ENST00000520857 A0A1W2PPM1 405 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms