RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 DPP3Q9NY33 737 aa18.84■□□□□ 0.61
TRAM1-203ENST00000520700 SPG21Q9NZD8 308 aa18.84■□□□□ 0.61
TRAM1-203ENST00000520700 HCSTQ9UBK5 93 aa18.84■□□□□ 0.61
TRAM1-203ENST00000520700 STK39Q9UEW8 545 aa18.84■□□□□ 0.61
TRAM1-203ENST00000520700 LRRIQ3A6PVS8 624 aaPredicted RBP18.83■□□□□ 0.6
TRAM1-203ENST00000520700 PIRO00625 290 aa18.83■□□□□ 0.6
TRAM1-203ENST00000520700 PMM2O15305 246 aa18.83■□□□□ 0.6
TRAM1-203ENST00000520700 STX10O60499 249 aa18.83■□□□□ 0.6
TRAM1-203ENST00000520700 ZC3H11AO75152 810 aaKnown RBP eCLIP18.83■□□□□ 0.6
TRAM1-203ENST00000520700 TNNI1P19237 187 aa18.83■□□□□ 0.6
TRAM1-203ENST00000520700 ZNF445P59923 1031 aa18.83■□□□□ 0.6
TRAM1-203ENST00000520700 MYL5Q02045 173 aa18.83■□□□□ 0.6
TRAM1-203ENST00000520700 SPAG1Q07617 926 aa18.83■□□□□ 0.6
TRAM1-203ENST00000520700 EPC2Q52LR7 807 aa18.83■□□□□ 0.6
TRAM1-203ENST00000520700 SPOUT1Q5T280 376 aaKnown RBP18.83■□□□□ 0.6
TRAM1-203ENST00000520700 C15orf39Q6ZRI6 1047 aa18.83■□□□□ 0.6
TRAM1-203ENST00000520700 TRIM59Q8IWR1 403 aa18.83■□□□□ 0.6
TRAM1-203ENST00000520700 ZNF516Q92618 1163 aa18.83■□□□□ 0.6
TRAM1-203ENST00000520700 IGSF21Q96ID5 467 aa18.83■□□□□ 0.6
TRAM1-203ENST00000520700 ANKRD36BP1Q96IX9 119 aa18.83■□□□□ 0.6
TRAM1-203ENST00000520700 C17orf80Q9BSJ5 609 aa18.83■□□□□ 0.6
TRAM1-203ENST00000520700 TUBGCP4Q9UGJ1 667 aa18.83■□□□□ 0.6
TRAM1-203ENST00000520700 ITGA11Q9UKX5 1188 aa18.83■□□□□ 0.6
TRAM1-203ENST00000520700 LZTS1Q9Y250 596 aa18.83■□□□□ 0.6
TRAM1-203ENST00000520700 NFE2L3Q9Y4A8 694 aa18.83■□□□□ 0.6
TRAM1-203ENST00000520700 ANK1P16157 1881 aa18.82■□□□□ 0.6
TRAM1-203ENST00000520700 PTPRJQ12913 1337 aa18.82■□□□□ 0.6
TRAM1-203ENST00000520700 SOX1O00570 391 aaPredicted RBP18.82■□□□□ 0.6
TRAM1-203ENST00000520700 TNNC2P02585 160 aa18.82■□□□□ 0.6
TRAM1-203ENST00000520700 C4BPAP04003 597 aaKnown RBP18.82■□□□□ 0.6
TRAM1-203ENST00000520700 DLATP10515 647 aaKnown RBP18.82■□□□□ 0.6
TRAM1-203ENST00000520700 PRKCSHP14314 528 aaPredicted RBP18.82■□□□□ 0.6
TRAM1-203ENST00000520700 OR1G1P47890 313 aa18.82■□□□□ 0.6
TRAM1-203ENST00000520700 ZNF165P49910 485 aa18.82■□□□□ 0.6
TRAM1-203ENST00000520700 DLG4P78352 724 aa18.82■□□□□ 0.6
TRAM1-203ENST00000520700 TFAMQ00059 246 aaKnown RBP18.82■□□□□ 0.6
TRAM1-203ENST00000520700 NCAPHQ15003 741 aa18.82■□□□□ 0.6
TRAM1-203ENST00000520700 TPD52L1Q16890 204 aaPredicted RBP18.82■□□□□ 0.6
TRAM1-203ENST00000520700 LRSAM1Q6UWE0 723 aa18.82■□□□□ 0.6
TRAM1-203ENST00000520700 CD300LGQ6UXG3 332 aa18.82■□□□□ 0.6
TRAM1-203ENST00000520700 FAM114A1Q8IWE2 563 aa18.82■□□□□ 0.6
TRAM1-203ENST00000520700 C1orf127Q8N9H9 656 aa18.82■□□□□ 0.6
TRAM1-203ENST00000520700 OR5B17Q8NGF7 314 aa18.82■□□□□ 0.6
TRAM1-203ENST00000520700 POP1Q99575 1024 aaKnown RBP18.82■□□□□ 0.6
TRAM1-203ENST00000520700 C11orf84Q9BUA3 381 aaPredicted RBP18.82■□□□□ 0.6
TRAM1-203ENST00000520700 ZNF576Q9H609 170 aa18.82■□□□□ 0.6
TRAM1-203ENST00000520700 TDRD15B5MCY1 1934 aaKnown RBP18.82■□□□□ 0.6
TRAM1-203ENST00000520700 PDCD11Q14690 1871 aaKnown RBP18.82■□□□□ 0.6
TRAM1-203ENST00000520700 GBF1Q92538 1859 aa18.82■□□□□ 0.6
TRAM1-203ENST00000520700 CASTOR2A6NHX0 329 aa18.81■□□□□ 0.6
TRAM1-203ENST00000520700 SMTNL1A8MU46 457 aa18.81■□□□□ 0.6
TRAM1-203ENST00000520700 H3BNC9 293 aa18.81■□□□□ 0.6
TRAM1-203ENST00000520700 PODXLO00592 558 aa18.81■□□□□ 0.6
TRAM1-203ENST00000520700 TMEM191BP0C7N4 346 aa18.81■□□□□ 0.6
TRAM1-203ENST00000520700 CTNNB1P35222 781 aa18.81■□□□□ 0.6
TRAM1-203ENST00000520700 CLCNKBP51801 687 aa18.81■□□□□ 0.6
TRAM1-203ENST00000520700 UBE3AQ05086 875 aa18.81■□□□□ 0.6
TRAM1-203ENST00000520700 ZACNQ401N2 412 aa18.81■□□□□ 0.6
TRAM1-203ENST00000520700 CCDC40Q4G0X9 1142 aa18.81■□□□□ 0.6
TRAM1-203ENST00000520700 CDKAL1Q5VV42 579 aa18.81■□□□□ 0.6
TRAM1-203ENST00000520700 C9orf57Q5W0N0 161 aa18.81■□□□□ 0.6
TRAM1-203ENST00000520700 TRAPPC11Q7Z392 1133 aa18.81■□□□□ 0.6
TRAM1-203ENST00000520700 SLC35C1Q96A29 364 aa18.81■□□□□ 0.6
TRAM1-203ENST00000520700 PAAF1Q9BRP4 392 aa18.81■□□□□ 0.6
TRAM1-203ENST00000520700 GOLGA2P5Q9HBQ8 144 aa18.81■□□□□ 0.6
TRAM1-203ENST00000520700 MARCH5Q9NX47 278 aa18.81■□□□□ 0.6
TRAM1-203ENST00000520700 CHD9Q3L8U1 2897 aa18.81■□□□□ 0.6
TRAM1-203ENST00000520700 LAMA3Q16787 3333 aa18.8■□□□□ 0.6
TRAM1-203ENST00000520700 STAU1O95793 577 aaKnown RBP18.8■□□□□ 0.6
TRAM1-203ENST00000520700 PNPLA4P41247 253 aa18.8■□□□□ 0.6
TRAM1-203ENST00000520700 RBP5P82980 135 aa18.8■□□□□ 0.6
TRAM1-203ENST00000520700 KRT17Q04695 432 aa18.8■□□□□ 0.6
TRAM1-203ENST00000520700 IQCB1Q15051 598 aa18.8■□□□□ 0.6
TRAM1-203ENST00000520700 SV2AQ7L0J3 742 aa18.8■□□□□ 0.6
TRAM1-203ENST00000520700 DDX53Q86TM3 631 aaKnown RBP18.8■□□□□ 0.6
TRAM1-203ENST00000520700 GPR65Q8IYL9 337 aa18.8■□□□□ 0.6
TRAM1-203ENST00000520700 RNF168Q8IYW5 571 aaPredicted RBP18.8■□□□□ 0.6
TRAM1-203ENST00000520700 LRRC52Q8N7C0 313 aa18.8■□□□□ 0.6
TRAM1-203ENST00000520700 KLHL23Q8NBE8 558 aa18.8■□□□□ 0.6
TRAM1-203ENST00000520700 FBXO22Q8NEZ5 403 aa18.8■□□□□ 0.6
TRAM1-203ENST00000520700 ANP32EQ9BTT0 268 aa18.8■□□□□ 0.6
TRAM1-203ENST00000520700 MTMR12Q9C0I1 747 aa18.8■□□□□ 0.6
TRAM1-203ENST00000520700 TMEM8AQ9HCN3 771 aa18.8■□□□□ 0.6
TRAM1-203ENST00000520700 SAMSN1Q9NSI8 373 aaKnown RBP18.8■□□□□ 0.6
TRAM1-203ENST00000520700 SIX4Q9UIU6 781 aa18.8■□□□□ 0.6
TRAM1-203ENST00000520700 ADAM28Q9UKQ2 775 aa18.8■□□□□ 0.6
TRAM1-203ENST00000520700 LRRC10BA6NIK2 292 aa18.79■□□□□ 0.6
TRAM1-203ENST00000520700 FGF18O76093 207 aa18.79■□□□□ 0.6
TRAM1-203ENST00000520700 B3GAT3O94766 335 aa18.79■□□□□ 0.6
TRAM1-203ENST00000520700 EEF1GP26641 437 aaKnown RBP18.79■□□□□ 0.6
TRAM1-203ENST00000520700 AARSP49588 968 aaKnown RBP eCLIP18.79■□□□□ 0.6
TRAM1-203ENST00000520700 PPP3CAQ08209 521 aa18.79■□□□□ 0.6
TRAM1-203ENST00000520700 ELAVL2Q12926 359 aaKnown RBP18.79■□□□□ 0.6
TRAM1-203ENST00000520700 LMBRD2Q68DH5 695 aaPredicted RBP18.79■□□□□ 0.6
TRAM1-203ENST00000520700 KRT39Q6A163 491 aa18.79■□□□□ 0.6
TRAM1-203ENST00000520700 SPRED2Q7Z698 418 aa18.79■□□□□ 0.6
TRAM1-203ENST00000520700 DHX40Q8IX18 779 aaKnown RBP18.79■□□□□ 0.6
TRAM1-203ENST00000520700 SPPL3Q8TCT6 385 aa18.79■□□□□ 0.6
TRAM1-203ENST00000520700 TMEM169Q96HH4 297 aa18.79■□□□□ 0.6
TRAM1-203ENST00000520700 CNOT6LQ96LI5 555 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms