RNA–Protein interactions for RNA: ENST00000520608.2

ZNF260-201, Transcript of zinc finger protein 260, humanhuman

TSL 3

Gene ZNF260, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260-201ENST00000520608 RAB33AQ14088 237 aa9.35□□□□□ -0.91
ZNF260-201ENST00000520608 UBXN2BQ14CS0 331 aa9.35□□□□□ -0.91
ZNF260-201ENST00000520608 MLF2Q15773 248 aaPredicted RBP9.35□□□□□ -0.91
ZNF260-201ENST00000520608 TTC38Q5R3I4 469 aa9.35□□□□□ -0.91
ZNF260-201ENST00000520608 CCDC83Q8IWF9 413 aa9.35□□□□□ -0.91
ZNF260-201ENST00000520608 KIAA2013Q8IYS2 634 aa9.35□□□□□ -0.91
ZNF260-201ENST00000520608 KIFAP3Q92845 792 aa9.35□□□□□ -0.91
ZNF260-201ENST00000520608 SEMA4AQ9H3S1 761 aa9.35□□□□□ -0.91
ZNF260-201ENST00000520608 SPATA6Q9NWH7 488 aaPredicted RBP9.35□□□□□ -0.91
ZNF260-201ENST00000520608 DLGAP2Q9P1A6 1054 aa9.35□□□□□ -0.91
ZNF260-201ENST00000520608 MTRRQ9UBK8 725 aa9.35□□□□□ -0.91
ZNF260-201ENST00000520608 LRWD1Q9UFC0 647 aa9.35□□□□□ -0.91
ZNF260-201ENST00000520608 COL4A3Q01955 1670 aa9.35□□□□□ -0.91
ZNF260-201ENST00000520608 KANSL1LA0AUZ9 987 aa9.34□□□□□ -0.91
ZNF260-201ENST00000520608 TMEM189-UBE2V1I3L0A0 370 aa9.34□□□□□ -0.91
ZNF260-201ENST00000520608 K7ERI5 159 aa9.34□□□□□ -0.91
ZNF260-201ENST00000520608 GLULP15104 373 aa9.34□□□□□ -0.91
ZNF260-201ENST00000520608 FGFR3P22607 806 aa9.34□□□□□ -0.91
ZNF260-201ENST00000520608 BRCC3P46736 316 aa9.34□□□□□ -0.91
ZNF260-201ENST00000520608 RBM25P49756 843 aaKnown RBP9.34□□□□□ -0.91
ZNF260-201ENST00000520608 ARPP19P56211 112 aa9.34□□□□□ -0.91
ZNF260-201ENST00000520608 STARD6P59095 220 aa9.34□□□□□ -0.91
ZNF260-201ENST00000520608 PFKPQ01813 784 aa9.34□□□□□ -0.91
ZNF260-201ENST00000520608 ORC2Q13416 577 aaPredicted RBP9.34□□□□□ -0.91
ZNF260-201ENST00000520608 UPP1Q16831 310 aa9.34□□□□□ -0.91
ZNF260-201ENST00000520608 UVSSAQ2YD98 709 aa9.34□□□□□ -0.91
ZNF260-201ENST00000520608 ZNF568Q3ZCX4 644 aa9.34□□□□□ -0.91
ZNF260-201ENST00000520608 SLC44A4Q53GD3 710 aa9.34□□□□□ -0.91
ZNF260-201ENST00000520608 NT5DC1Q5TFE4 455 aa9.34□□□□□ -0.91
ZNF260-201ENST00000520608 RSPO2Q6UXX9 243 aaPredicted RBP9.34□□□□□ -0.91
ZNF260-201ENST00000520608 ANKS3Q6ZW76 656 aa9.34□□□□□ -0.91
ZNF260-201ENST00000520608 ERMP1Q7Z2K6 904 aa9.34□□□□□ -0.91
ZNF260-201ENST00000520608 NPAS3Q8IXF0 933 aa9.34□□□□□ -0.91
ZNF260-201ENST00000520608 C3orf58Q8NDZ4 430 aa9.34□□□□□ -0.91
ZNF260-201ENST00000520608 SNX29Q8TEQ0 813 aa9.34□□□□□ -0.91
ZNF260-201ENST00000520608 UROC1Q96N76 676 aa9.34□□□□□ -0.91
ZNF260-201ENST00000520608 PPP1R10Q96QC0 940 aaKnown RBP9.34□□□□□ -0.91
ZNF260-201ENST00000520608 CCDC94Q9BW85 323 aaPredicted RBP9.34□□□□□ -0.91
ZNF260-201ENST00000520608 BCO2Q9BYV7 579 aa9.34□□□□□ -0.91
ZNF260-201ENST00000520608 FOXP1Q9H334 677 aaPredicted RBP9.34□□□□□ -0.91
ZNF260-201ENST00000520608 TOPORSQ9NS56 1045 aaPredicted RBP9.34□□□□□ -0.91
ZNF260-201ENST00000520608 DDX19AQ9NUU7 478 aaKnown RBP9.34□□□□□ -0.91
ZNF260-201ENST00000520608 DNMT3BQ9UBC3 853 aaKnown RBP9.34□□□□□ -0.91
ZNF260-201ENST00000520608 NOL7Q9UMY1 257 aaKnown RBP9.34□□□□□ -0.91
ZNF260-201ENST00000520608 KIAA1024Q9UPX6 916 aa9.34□□□□□ -0.91
ZNF260-201ENST00000520608 MRPS23Q9Y3D9 190 aaKnown RBP9.34□□□□□ -0.91
ZNF260-201ENST00000520608 MYH15Q9Y2K3 1946 aa9.34□□□□□ -0.91
ZNF260-201ENST00000520608 SPTBN4Q9H254 2564 aa9.34□□□□□ -0.91
ZNF260-201ENST00000520608 PHLPP2Q6ZVD8 1323 aa9.33□□□□□ -0.92
ZNF260-201ENST00000520608 PTPRZ1P23471 2315 aaPredicted RBP9.33□□□□□ -0.92
ZNF260-201ENST00000520608 VWA8A3KMH1 1905 aa9.33□□□□□ -0.92
ZNF260-201ENST00000520608 WDR87Q6ZQQ6 2873 aa9.33□□□□□ -0.92
ZNF260-201ENST00000520608 SMIM28A0A1B0GU29 152 aa9.33□□□□□ -0.92
ZNF260-201ENST00000520608 FAM170BA6NMN3 283 aa9.33□□□□□ -0.92
ZNF260-201ENST00000520608 PODXLO00592 558 aa9.33□□□□□ -0.92
ZNF260-201ENST00000520608 NRG2O14511 850 aaPredicted RBP9.33□□□□□ -0.92
ZNF260-201ENST00000520608 PRRG1O14668 218 aa9.33□□□□□ -0.92
ZNF260-201ENST00000520608 LAMTOR5O43504 91 aa9.33□□□□□ -0.92
ZNF260-201ENST00000520608 KINO60870 393 aaKnown RBP9.33□□□□□ -0.92
ZNF260-201ENST00000520608 LRG1P02750 347 aa9.33□□□□□ -0.92
ZNF260-201ENST00000520608 RHOP08100 348 aa9.33□□□□□ -0.92
ZNF260-201ENST00000520608 POU2F2P09086 479 aa9.33□□□□□ -0.92
ZNF260-201ENST00000520608 HARSP12081 509 aaKnown RBP9.33□□□□□ -0.92
ZNF260-201ENST00000520608 CD72P21854 359 aa9.33□□□□□ -0.92
ZNF260-201ENST00000520608 MUTP22033 750 aa9.33□□□□□ -0.92
ZNF260-201ENST00000520608 ELF1P32519 619 aa9.33□□□□□ -0.92
ZNF260-201ENST00000520608 PEX3P56589 373 aa9.33□□□□□ -0.92
ZNF260-201ENST00000520608 PRKCQQ04759 706 aa9.33□□□□□ -0.92
ZNF260-201ENST00000520608 DMP1Q13316 513 aaPredicted RBP9.33□□□□□ -0.92
ZNF260-201ENST00000520608 ECM1Q16610 540 aa9.33□□□□□ -0.92
ZNF260-201ENST00000520608 SLC5A9Q2M3M2 681 aa9.33□□□□□ -0.92
ZNF260-201ENST00000520608 PACS2Q86VP3 889 aa9.33□□□□□ -0.92
ZNF260-201ENST00000520608 CEP120Q8N960 986 aa9.33□□□□□ -0.92
ZNF260-201ENST00000520608 FAM184AQ8NB25 1140 aa9.33□□□□□ -0.92
ZNF260-201ENST00000520608 MCRS1Q96EZ8 462 aa9.33□□□□□ -0.92
ZNF260-201ENST00000520608 TCHPQ9BT92 498 aa9.33□□□□□ -0.92
ZNF260-201ENST00000520608 RAB34Q9BZG1 259 aa9.33□□□□□ -0.92
ZNF260-201ENST00000520608 CDT1Q9H211 546 aa9.33□□□□□ -0.92
ZNF260-201ENST00000520608 SLC38A7Q9NVC3 462 aa9.33□□□□□ -0.92
ZNF260-201ENST00000520608 KCNH3Q9ULD8 1083 aa9.33□□□□□ -0.92
ZNF260-201ENST00000520608 LIMCH1Q9UPQ0 1083 aa9.33□□□□□ -0.92
ZNF260-201ENST00000520608 TNFSF13BQ9Y275 285 aa9.33□□□□□ -0.92
ZNF260-201ENST00000520608 MTF2Q9Y483 593 aaPredicted RBP9.33□□□□□ -0.92
ZNF260-201ENST00000520608 NUB1Q9Y5A7 615 aa9.33□□□□□ -0.92
ZNF260-201ENST00000520608 BACE2Q9Y5Z0 518 aa9.33□□□□□ -0.92
ZNF260-201ENST00000520608 RIF1Q5UIP0 2472 aaKnown RBP9.33□□□□□ -0.92
ZNF260-201ENST00000520608 FAM186AA6NE01 2351 aa9.32□□□□□ -0.92
ZNF260-201ENST00000520608 E9PMD0 336 aa9.32□□□□□ -0.92
ZNF260-201ENST00000520608 EIF5BO60841 1220 aaKnown RBP9.32□□□□□ -0.92
ZNF260-201ENST00000520608 HIP1RO75146 1068 aa9.32□□□□□ -0.92
ZNF260-201ENST00000520608 CEBPBP17676 345 aa9.32□□□□□ -0.92
ZNF260-201ENST00000520608 GRM5P41594 1212 aa9.32□□□□□ -0.92
ZNF260-201ENST00000520608 NPTX2P47972 431 aa9.32□□□□□ -0.92
ZNF260-201ENST00000520608 TRAPPC10P48553 1259 aa9.32□□□□□ -0.92
ZNF260-201ENST00000520608 ROR1Q01973 937 aa9.32□□□□□ -0.92
ZNF260-201ENST00000520608 CSTF1Q05048 431 aaKnown RBP9.32□□□□□ -0.92
ZNF260-201ENST00000520608 SOX4Q06945 474 aaPredicted RBP9.32□□□□□ -0.92
ZNF260-201ENST00000520608 ZRSR1Q15695 479 aaKnown RBP9.32□□□□□ -0.92
ZNF260-201ENST00000520608 CD300LGQ6UXG3 332 aa9.32□□□□□ -0.92
ZNF260-201ENST00000520608 TPRG1Q6ZUI0 275 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms