RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-208	ENST00000520580	NETO2	Q8NC67	525 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	TTLL11	Q8NHH1	800 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	WDR48	Q8TAF3	677 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	CSGALNACT1	Q8TDX6	532 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	TP53INP1	Q96A56	240 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	NMD3	Q96D46	503 aa	Known RBP	4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	HRASLS5	Q96KN8	279 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	SYT3	Q9BQG1	590 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	TACO1	Q9BSH4	297 aa	Known RBP	4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	PRKRIP1	Q9H875	184 aa	Predicted RBP	4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	SERHL	Q9NQF3	203 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	OLA1	Q9NTK5	396 aa	Known RBP	4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	ACSL6	Q9UKU0	697 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	ARHGAP26	Q9UNA1	814 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	WASF3	Q9UPY6	502 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580		A0A1W2PPH5	198 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	SYNDIG1L	A6NDD5	238 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	WNT10B	O00744	389 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	FCHO1	O14526	889 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	RASSF9	O75901	435 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	DBH	P09172	617 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	TRHR	P34981	398 aa	Predicted RBP	4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	CARS	P49589	748 aa	Known RBP	4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	PTK2B	Q14289	1009 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	KRT32	Q14532	448 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	MST1L	Q2TV78	715 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	BORA	Q6PGQ7	559 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	KLHL17	Q6TDP4	642 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	LIPI	Q6XZB0	460 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	ANKRD52	Q8NB46	1076 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	TOE1	Q96GM8	510 aa	Known RBP	4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	ZC3H10	Q96K80	434 aa	Known RBP	4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	SDF4	Q9BRK5	362 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	METTL22	Q9BUU2	404 aa	Predicted RBP	4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	KATNAL1	Q9BW62	490 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	MANSC1	Q9H8J5	431 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	TMEM59L	Q9UK28	342 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	NOL7	Q9UMY1	257 aa	Known RBP	4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	PLA2G2D	Q9UNK4	145 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	TMEM98	Q9Y2Y6	226 aa		4.19	□□□□□ -1.74
SREK1-208	ENST00000520580	TRIM43B	A6NCK2	446 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	ZNF839	A8K0R7	811 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	NUDT19	A8MXV4	375 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	PYCARD-AS1	I3L0S3	204 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	GPR32	O75388	356 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	ARHGEF15	O94989	841 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	CD1A	P06126	327 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	MCC	P23508	829 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	ARFIP2	P53365	341 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	SEC24C	P53992	1094 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	ERVFC1	P60507	584 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	NOMO3	P69849	1222 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	RAB39A	Q14964	217 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	UBE3C	Q15386	1083 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	SMAD1	Q15797	465 aa	Known RBP	4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	SKIDA1	Q1XH10	827 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	CCDC178	Q5BJE1	867 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	RNF43	Q68DV7	783 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	BMP8A	Q7Z5Y6	402 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	GALNT5	Q7Z7M9	940 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	SLC15A4	Q8N697	577 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	DCBLD1	Q8N8Z6	715 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	NELL1	Q92832	810 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	PDGFD	Q9GZP0	370 aa	Predicted RBP	4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	RSPH9	Q9H1X1	276 aa	Predicted RBP	4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	WDCP	Q9H6R7	721 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	EPS8L2	Q9H6S3	715 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	SMURF2	Q9HAU4	748 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	ZNF212	Q9UDV6	495 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	CDC42EP3	Q9UKI2	254 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	NUDT5	Q9UKK9	219 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580		A0A087WZ62	844 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	ANKRD18B	A2A2Z9	1011 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	TSPY2	A6NKD2	308 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	HNRNPDL	O14979	420 aa	Known RBP	4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	AHCYL1	O43865	530 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	ARIH2	O95376	493 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	MATN4	O95460	622 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	ABHD16A	O95870	558 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	SBK3	P0C264	359 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	TSPY3	P0CV98	308 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	TSPY8	P0CW00	308 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	IL1R1	P14778	569 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	RXRA	P19793	462 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	SREBF1	P36956	1147 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	RAD52	P43351	418 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	ZBED6	P86452	979 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	TSPY1	Q01534	308 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	BNIP3	Q12983	259 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	CCNG2	Q16589	344 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	DGKD	Q16760	1214 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	SPATA1	Q5VX52	437 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	VASN	Q6EMK4	673 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	CATSPERG	Q6ZRH7	1159 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	FAM90A1	Q86YD7	464 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	ANKS4B	Q8N8V4	417 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	OR56A3	Q8NH54	315 aa		4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	SNRNP27	Q8WVK2	155 aa	Known RBP	4.18	□□□□□ -1.74
SREK1-208	ENST00000520580	HERVK_113	Q902F9	699 aa		4.18	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms