RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 SRRM3A6NNA2 597 aaPredicted RBP10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 RBAK-RBAKDNI3L0D1 243 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 EXOC3O60645 756 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 TRPA1O75762 1119 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 BDNFP23560 247 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 RPA3P35244 121 aaPredicted RBP10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 COILP38432 576 aaPredicted RBP10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 PPP1R2P41236 205 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 POLGP54098 1239 aaPredicted RBP10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 KIF22Q14807 665 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 GALNTL6Q49A17 601 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 PACS1Q6VY07 963 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 LRRC74BQ6ZQY2 392 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 NEK10Q6ZWH5 1172 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 SLC15A3Q8IY34 581 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 RFWD2Q8NHY2 731 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 ERMNQ8TAM6 284 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 CCDC127Q96BQ5 260 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 IQCDQ96DY2 449 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 TUBGCP5Q96RT8 1024 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 EYA3Q99504 573 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 TUBA8Q9NY65 449 aaPredicted RBP10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 SSX2IPQ9Y2D8 614 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 AK5Q9Y6K8 562 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 PVALEFA0A1B0GWK0 134 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 A0A1W2PPM1 405 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 TMEM221A6NGB7 291 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 TISP43B9A030 160 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 H3BRJ5 948 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 SPATA24Q86W54 205 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 FAM186BQ8IYM0 893 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 PPM1KQ8N3J5 372 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 HES6Q96HZ4 224 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 CCT7Q99832 543 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 THTPAQ9BU02 230 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 TRABDQ9H4I3 376 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 RETREG1Q9H6L5 497 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 CYP4F11Q9HBI6 524 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 TDRKHQ9Y2W6 561 aaKnown RBP10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 PITPNM2Q9BZ72 1349 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 PCDH11XQ9BZA7 1347 aa10.7□□□□□ -0.7
PDGFRB-207ENST00000520579 MYOCOSA0A1B0GUC4 107 aa10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 DDX39AO00148 427 aaKnown RBP10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 NUDT17P0C025 328 aa10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 ZNF76P36508 570 aa10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 GCLMP48507 274 aa10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 TMED10P49755 219 aaKnown RBP10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 RTP1P59025 263 aa10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 LVRNQ6Q4G3 990 aa10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 AGGF1Q8N302 714 aaeCLIP10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 FBXO41Q8TF61 875 aa10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 CASP10Q92851 521 aa10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 DNAJC19Q96DA6 116 aa10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 CCDC77Q9BR77 488 aa10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 CCDC87Q9NVE4 849 aa10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 BOLA2-SMG1P6H3BVE0 249 aa10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 MAGEB3O15480 346 aa10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 HSPA8P11142 646 aaKnown RBP10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 RARGP13631 454 aa10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 GNAZP19086 355 aa10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 TBL3Q12788 808 aaKnown RBP10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 INAQ16352 499 aa10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 DGKHQ86XP1 1220 aa10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 C1orf131Q8NDD1 294 aaKnown RBP10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 HAUS5O94927 633 aa10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 KRT5P13647 590 aa10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 ALADP13716 330 aa10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 ETS1P14921 441 aa10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 ATF7P17544 494 aaPredicted RBP10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 PGM1P36871 562 aa10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 HALP42357 657 aa10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 SLC1A5Q15758 541 aa10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 LRRC6Q86X45 466 aa10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 TPH2Q8IWU9 490 aa10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 SCUBE1Q8IWY4 988 aa10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 KBTBD2Q8IY47 623 aa10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 MPP4Q96JB8 637 aa10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 NINJ2Q9NZG7 142 aa10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 MYH4Q9Y623 1939 aa10.69□□□□□ -0.7
PDGFRB-207ENST00000520579 FAM187AA6NFU0 413 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 DDHD2O94830 711 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 FAM13AO94988 1023 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 GJB6O95452 261 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 ADRA1DP25100 572 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 DYNLT1P63172 113 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 FASTKD3Q14CZ7 662 aaKnown RBP10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 MTFR1Q15390 333 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 CNPY1Q3B7I2 92 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 KCTD21Q4G0X4 260 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 TMCO4Q5TGY1 634 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 ZNF554Q86TJ5 538 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 TXNRD3Q86VQ6 643 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 PRPF31Q8WWY3 499 aaKnown RBP10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 REEP2Q9BRK0 252 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 PPARGC1AQ9UBK2 798 aaKnown RBP10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 DKK3Q9UBP4 350 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 STK17AQ9UEE5 414 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 EFR3BQ9Y2G0 817 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 FAM47DPA6NHR8 397 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 MED24O75448 989 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms