RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 SIX1Q15475 284 aaPredicted RBP27.51■■□□□ 1.99
COL13A1-213ENST00000520267 ZPBP2Q6X784 338 aa27.51■■□□□ 1.99
COL13A1-213ENST00000520267 ANKRD13AQ8IZ07 590 aa27.51■■□□□ 1.99
COL13A1-213ENST00000520267 C1orf131Q8NDD1 294 aaKnown RBP27.51■■□□□ 1.99
COL13A1-213ENST00000520267 CCDC113Q9H0I3 377 aa27.51■■□□□ 1.99
COL13A1-213ENST00000520267 CWC15Q9P013 229 aaKnown RBP27.51■■□□□ 1.99
COL13A1-213ENST00000520267 RNF181Q9P0P0 153 aa27.51■■□□□ 1.99
COL13A1-213ENST00000520267 MCM3APO60318 1980 aa27.5■■□□□ 1.99
COL13A1-213ENST00000520267 SPDYE5A6NIY4 337 aa27.5■■□□□ 1.99
COL13A1-213ENST00000520267 GNGT1P63211 74 aa27.5■■□□□ 1.99
COL13A1-213ENST00000520267 NOP14P78316 857 aaKnown RBP27.5■■□□□ 1.99
COL13A1-213ENST00000520267 CENPCQ03188 943 aa27.5■■□□□ 1.99
COL13A1-213ENST00000520267 MTMR3Q13615 1198 aa27.5■■□□□ 1.99
COL13A1-213ENST00000520267 LRRC71Q8N4P6 559 aa27.5■■□□□ 1.99
COL13A1-213ENST00000520267 BBXQ8WY36 941 aaPredicted RBP27.5■■□□□ 1.99
COL13A1-213ENST00000520267 FAM167AQ96KS9 214 aa27.5■■□□□ 1.99
COL13A1-213ENST00000520267 FMO2Q99518 471 aa27.5■■□□□ 1.99
COL13A1-213ENST00000520267 FAM189A1O60320 539 aa27.5■■□□□ 1.99
COL13A1-213ENST00000520267 SRGAP2CP0DJJ0 459 aa27.5■■□□□ 1.99
COL13A1-213ENST00000520267 RARAP10276 462 aa27.5■■□□□ 1.99
COL13A1-213ENST00000520267 ZNF844Q08AG5 666 aa27.5■■□□□ 1.99
COL13A1-213ENST00000520267 CELF3Q5SZQ8 465 aaKnown RBP27.5■■□□□ 1.99
COL13A1-213ENST00000520267 IER5Q5VY09 327 aa27.5■■□□□ 1.99
COL13A1-213ENST00000520267 CCDC137Q6PK04 289 aaKnown RBP27.5■■□□□ 1.99
COL13A1-213ENST00000520267 PASD1Q8IV76 773 aa27.5■■□□□ 1.99
COL13A1-213ENST00000520267 RASAL2Q9UJF2 1139 aa27.5■■□□□ 1.99
COL13A1-213ENST00000520267 GRIN2DO15399 1336 aa27.49■■□□□ 1.99
COL13A1-213ENST00000520267 ZBTB42B2RXF5 422 aa27.49■■□□□ 1.99
COL13A1-213ENST00000520267 MYBL1P10243 752 aa27.49■■□□□ 1.99
COL13A1-213ENST00000520267 NSFP46459 744 aaKnown RBP27.49■■□□□ 1.99
COL13A1-213ENST00000520267 ATP1A2P50993 1020 aa27.49■■□□□ 1.99
COL13A1-213ENST00000520267 LAMTOR4Q0VGL1 99 aa27.49■■□□□ 1.99
COL13A1-213ENST00000520267 NCOA4Q13772 614 aa27.49■■□□□ 1.99
COL13A1-213ENST00000520267 CYP1B1Q16678 543 aa27.49■■□□□ 1.99
COL13A1-213ENST00000520267 MON1BQ7L1V2 547 aa27.49■■□□□ 1.99
COL13A1-213ENST00000520267 BRSK2Q8IWQ3 736 aa27.49■■□□□ 1.99
COL13A1-213ENST00000520267 LGR5O75473 907 aa27.48■■□□□ 1.99
COL13A1-213ENST00000520267 GNA15P30679 374 aa27.48■■□□□ 1.99
COL13A1-213ENST00000520267 EFNA5P52803 228 aa27.48■■□□□ 1.99
COL13A1-213ENST00000520267 MOGSQ13724 837 aa27.48■■□□□ 1.99
COL13A1-213ENST00000520267 ZDHHC24Q6UX98 284 aa27.48■■□□□ 1.99
COL13A1-213ENST00000520267 RBBP8NLQ8NC74 664 aaPredicted RBP27.48■■□□□ 1.99
COL13A1-213ENST00000520267 CDCA5Q96FF9 252 aa27.48■■□□□ 1.99
COL13A1-213ENST00000520267 TCHPQ9BT92 498 aa27.48■■□□□ 1.99
COL13A1-213ENST00000520267 MRPL4Q9BYD3 311 aaKnown RBP27.48■■□□□ 1.99
COL13A1-213ENST00000520267 TXLNGYQ9BZA5 131 aa27.48■■□□□ 1.99
COL13A1-213ENST00000520267 KCNH4Q9UQ05 1017 aa27.48■■□□□ 1.99
COL13A1-213ENST00000520267 CST3P01034 146 aaPredicted RBP27.48■■□□□ 1.99
COL13A1-213ENST00000520267 DRG2P55039 364 aaKnown RBP27.48■■□□□ 1.99
COL13A1-213ENST00000520267 TTLL12Q14166 644 aaPredicted RBP27.48■■□□□ 1.99
COL13A1-213ENST00000520267 LLGL1Q15334 1064 aa27.48■■□□□ 1.99
COL13A1-213ENST00000520267 CDCA2Q69YH5 1023 aaPredicted RBP27.48■■□□□ 1.99
COL13A1-213ENST00000520267 KDM7AQ6ZMT4 941 aa27.48■■□□□ 1.99
COL13A1-213ENST00000520267 ABRAQ8N0Z2 381 aa27.48■■□□□ 1.99
COL13A1-213ENST00000520267 TRIM11Q96F44 468 aa27.48■■□□□ 1.99
COL13A1-213ENST00000520267 MTUS1Q9ULD2 1270 aa27.48■■□□□ 1.99
COL13A1-213ENST00000520267 CNTN6Q9UQ52 1028 aa27.48■■□□□ 1.99
COL13A1-213ENST00000520267 HMGB1P1B2RPK0 211 aaPredicted RBP27.47■■□□□ 1.99
COL13A1-213ENST00000520267 NOP56O00567 594 aaKnown RBP27.47■■□□□ 1.99
COL13A1-213ENST00000520267 PPFIA2O75334 1257 aa27.47■■□□□ 1.99
COL13A1-213ENST00000520267 TBXAS1P24557 533 aaPredicted RBP27.47■■□□□ 1.99
COL13A1-213ENST00000520267 COILP38432 576 aaPredicted RBP27.47■■□□□ 1.99
COL13A1-213ENST00000520267 FBXO16Q8IX29 292 aaPredicted RBP27.47■■□□□ 1.99
COL13A1-213ENST00000520267 RNF149Q8NC42 400 aa27.47■■□□□ 1.99
COL13A1-213ENST00000520267 ACO2Q99798 780 aaKnown RBP27.47■■□□□ 1.99
COL13A1-213ENST00000520267 GRHL1Q9NZI5 618 aa27.47■■□□□ 1.99
COL13A1-213ENST00000520267 ATP8A1Q9Y2Q0 1164 aa27.47■■□□□ 1.99
COL13A1-213ENST00000520267 PPME1Q9Y570 386 aa27.47■■□□□ 1.99
COL13A1-213ENST00000520267 DNAJC25-GNG10A0A024R161 153 aa27.47■■□□□ 1.99
COL13A1-213ENST00000520267 MYO1FO00160 1098 aa27.47■■□□□ 1.99
COL13A1-213ENST00000520267 TOM1L1O75674 476 aa27.47■■□□□ 1.99
COL13A1-213ENST00000520267 PLTPP55058 493 aa27.47■■□□□ 1.99
COL13A1-213ENST00000520267 NOMO3P69849 1222 aa27.47■■□□□ 1.99
COL13A1-213ENST00000520267 PLCB4Q15147 1175 aa27.47■■□□□ 1.99
COL13A1-213ENST00000520267 TMEM63BQ5T3F8 832 aa27.47■■□□□ 1.99
COL13A1-213ENST00000520267 COPS5Q92905 334 aa27.47■■□□□ 1.99
COL13A1-213ENST00000520267 MMP19Q99542 508 aa27.47■■□□□ 1.99
COL13A1-213ENST00000520267 MPHOSPH6Q99547 160 aaKnown RBP27.47■■□□□ 1.99
COL13A1-213ENST00000520267 C11orf70Q9BRQ4 267 aa27.47■■□□□ 1.99
COL13A1-213ENST00000520267 GOLGA6L10A6NI86 522 aa27.46■■□□□ 1.99
COL13A1-213ENST00000520267 MYZAPP0CAP1 466 aa27.46■■□□□ 1.99
COL13A1-213ENST00000520267 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.46■■□□□ 1.99
COL13A1-213ENST00000520267 EFCAB13Q8IY85 973 aa27.46■■□□□ 1.99
COL13A1-213ENST00000520267 TCP11Q8WWU5 503 aa27.46■■□□□ 1.99
COL13A1-213ENST00000520267 CENPHQ9H3R5 247 aa27.46■■□□□ 1.99
COL13A1-213ENST00000520267 IGKV6-21A0A0C4DH24 114 aa27.46■■□□□ 1.99
COL13A1-213ENST00000520267 EIF3HO15372 352 aaKnown RBP eCLIP27.46■■□□□ 1.99
COL13A1-213ENST00000520267 PRKCBP05771 671 aa27.46■■□□□ 1.99
COL13A1-213ENST00000520267 NR1D1P20393 614 aa27.46■■□□□ 1.99
COL13A1-213ENST00000520267 RPL21P46778 160 aaKnown RBP27.46■■□□□ 1.99
COL13A1-213ENST00000520267 KCNJ1P48048 391 aa27.46■■□□□ 1.99
COL13A1-213ENST00000520267 PDCLQ13371 301 aa27.46■■□□□ 1.99
COL13A1-213ENST00000520267 KCTD2Q14681 263 aa27.46■■□□□ 1.99
COL13A1-213ENST00000520267 KCNV1Q6PIU1 500 aa27.46■■□□□ 1.99
COL13A1-213ENST00000520267 PLPPR4Q7Z2D5 763 aa27.46■■□□□ 1.99
COL13A1-213ENST00000520267 FBXO25Q8TCJ0 367 aa27.46■■□□□ 1.99
COL13A1-213ENST00000520267 TRAPPC12Q8WVT3 735 aa27.46■■□□□ 1.99
COL13A1-213ENST00000520267 FAM212AQ96EL1 285 aa27.46■■□□□ 1.99
COL13A1-213ENST00000520267 SPATA33Q96N06 139 aa27.46■■□□□ 1.99
COL13A1-213ENST00000520267 THAP12O43422 761 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms