RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 SLC26A4O43511 780 aa13.6□□□□□ -0.23
CSMD1-205ENST00000519623 XYLBO75191 536 aa13.6□□□□□ -0.23
CSMD1-205ENST00000519623 HARSP12081 509 aaKnown RBP13.6□□□□□ -0.23
CSMD1-205ENST00000519623 NCKAP1LP55160 1127 aa13.6□□□□□ -0.23
CSMD1-205ENST00000519623 CACNB1Q02641 598 aaPredicted RBP13.6□□□□□ -0.23
CSMD1-205ENST00000519623 MCL1Q07820 350 aa13.6□□□□□ -0.23
CSMD1-205ENST00000519623 STRN3Q13033 797 aa13.6□□□□□ -0.23
CSMD1-205ENST00000519623 VARS2Q5ST30 1063 aaKnown RBP13.6□□□□□ -0.23
CSMD1-205ENST00000519623 ZNF461Q8TAF7 563 aa13.6□□□□□ -0.23
CSMD1-205ENST00000519623 GPR152Q8TDT2 470 aa13.6□□□□□ -0.23
CSMD1-205ENST00000519623 FGF13Q92913 245 aa13.6□□□□□ -0.23
CSMD1-205ENST00000519623 FGF14Q92915 247 aa13.6□□□□□ -0.23
CSMD1-205ENST00000519623 CDK5RAP3Q96JB5 506 aa13.6□□□□□ -0.23
CSMD1-205ENST00000519623 AK8Q96MA6 479 aa13.6□□□□□ -0.23
CSMD1-205ENST00000519623 TBC1D32Q96NH3 1257 aa13.6□□□□□ -0.23
CSMD1-205ENST00000519623 SLC2A4RGQ9NR83 387 aa13.6□□□□□ -0.23
CSMD1-205ENST00000519623 BLOC1S4Q9NUP1 217 aa13.6□□□□□ -0.23
CSMD1-205ENST00000519623 HCFC1R1Q9NWW0 138 aa13.6□□□□□ -0.23
CSMD1-205ENST00000519623 CA14Q9ULX7 337 aa13.6□□□□□ -0.23
CSMD1-205ENST00000519623 POLIQ9UNA4 740 aa13.6□□□□□ -0.23
CSMD1-205ENST00000519623 PDCD11Q14690 1871 aaKnown RBP13.59□□□□□ -0.23
CSMD1-205ENST00000519623 MYO15AQ9UKN7 3530 aa13.59□□□□□ -0.23
CSMD1-205ENST00000519623 ARHGEF37A1IGU5 675 aa13.59□□□□□ -0.23
CSMD1-205ENST00000519623 SYN3O14994 580 aa13.59□□□□□ -0.23
CSMD1-205ENST00000519623 CLDN3O15551 220 aa13.59□□□□□ -0.23
CSMD1-205ENST00000519623 NBL1P41271 181 aa13.59□□□□□ -0.23
CSMD1-205ENST00000519623 GPC5P78333 572 aa13.59□□□□□ -0.23
CSMD1-205ENST00000519623 ROR1Q01973 937 aa13.59□□□□□ -0.23
CSMD1-205ENST00000519623 GRIN1Q05586 938 aa13.59□□□□□ -0.23
CSMD1-205ENST00000519623 NOLC1Q14978 699 aaKnown RBP eCLIP13.59□□□□□ -0.23
CSMD1-205ENST00000519623 ZBTB6Q15916 424 aa13.59□□□□□ -0.23
CSMD1-205ENST00000519623 POTEHQ6S545 545 aa13.59□□□□□ -0.23
CSMD1-205ENST00000519623 HAUS6Q7Z4H7 955 aa13.59□□□□□ -0.23
CSMD1-205ENST00000519623 CCDC105Q8IYK2 499 aa13.59□□□□□ -0.23
CSMD1-205ENST00000519623 TMEM130Q8N3G9 435 aa13.59□□□□□ -0.23
CSMD1-205ENST00000519623 DTWD2Q8NBA8 298 aa13.59□□□□□ -0.23
CSMD1-205ENST00000519623 SUSD3Q96L08 255 aa13.59□□□□□ -0.23
CSMD1-205ENST00000519623 UPF2Q9HAU5 1272 aaKnown RBP13.59□□□□□ -0.23
CSMD1-205ENST00000519623 LARSQ9P2J5 1176 aaKnown RBP13.59□□□□□ -0.23
CSMD1-205ENST00000519623 ANKFY1Q9P2R3 1169 aa13.59□□□□□ -0.23
CSMD1-205ENST00000519623 KCNH3Q9ULD8 1083 aa13.59□□□□□ -0.23
CSMD1-205ENST00000519623 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.59□□□□□ -0.23
CSMD1-205ENST00000519623 TTC26A0AVF1 554 aa13.58□□□□□ -0.24
CSMD1-205ENST00000519623 WDR27A2RRH5 827 aa13.58□□□□□ -0.24
CSMD1-205ENST00000519623 GFRA3O60609 400 aa13.58□□□□□ -0.24
CSMD1-205ENST00000519623 ATF2P15336 505 aa13.58□□□□□ -0.24
CSMD1-205ENST00000519623 UBA7P41226 1012 aa13.58□□□□□ -0.24
CSMD1-205ENST00000519623 ZNF131P52739 623 aa13.58□□□□□ -0.24
CSMD1-205ENST00000519623 PABPC1LQ4VXU2 614 aaKnown RBP13.58□□□□□ -0.24
CSMD1-205ENST00000519623 PHLDB3Q6NSJ2 640 aa13.58□□□□□ -0.24
CSMD1-205ENST00000519623 REEP2Q9BRK0 252 aa13.58□□□□□ -0.24
CSMD1-205ENST00000519623 TBC1D17Q9HA65 648 aa13.58□□□□□ -0.24
CSMD1-205ENST00000519623 PLEKHA5Q9HAU0 1116 aa13.58□□□□□ -0.24
CSMD1-205ENST00000519623 FBXL5Q9UKA1 691 aa13.58□□□□□ -0.24
CSMD1-205ENST00000519623 ODF2LQ9ULJ1 636 aa13.58□□□□□ -0.24
CSMD1-205ENST00000519623 NUB1Q9Y5A7 615 aa13.58□□□□□ -0.24
CSMD1-205ENST00000519623 MYH15Q9Y2K3 1946 aa13.58□□□□□ -0.24
CSMD1-205ENST00000519623 FAM186AA6NE01 2351 aa13.58□□□□□ -0.24
CSMD1-205ENST00000519623 H0YCG3 227 aa13.57□□□□□ -0.24
CSMD1-205ENST00000519623 H7C4K7 107 aa13.57□□□□□ -0.24
CSMD1-205ENST00000519623 STK25O00506 426 aa13.57□□□□□ -0.24
CSMD1-205ENST00000519623 FAM189A1O60320 539 aa13.57□□□□□ -0.24
CSMD1-205ENST00000519623 SEC24AO95486 1093 aa13.57□□□□□ -0.24
CSMD1-205ENST00000519623 ADRB2P07550 413 aa13.57□□□□□ -0.24
CSMD1-205ENST00000519623 RHOP08100 348 aa13.57□□□□□ -0.24
CSMD1-205ENST00000519623 CLTAP09496 248 aa13.57□□□□□ -0.24
CSMD1-205ENST00000519623 CXCL8P10145 99 aa13.57□□□□□ -0.24
CSMD1-205ENST00000519623 SPAG1Q07617 926 aa13.57□□□□□ -0.24
CSMD1-205ENST00000519623 CUL4AQ13619 759 aa13.57□□□□□ -0.24
CSMD1-205ENST00000519623 DHX8Q14562 1220 aaKnown RBP13.57□□□□□ -0.24
CSMD1-205ENST00000519623 MCM6Q14566 821 aa13.57□□□□□ -0.24
CSMD1-205ENST00000519623 ASCL5Q7RTU5 278 aa13.57□□□□□ -0.24
CSMD1-205ENST00000519623 BRAPQ7Z569 592 aa13.57□□□□□ -0.24
CSMD1-205ENST00000519623 GPBP1Q86WP2 473 aa13.57□□□□□ -0.24
CSMD1-205ENST00000519623 NPAS3Q8IXF0 933 aa13.57□□□□□ -0.24
CSMD1-205ENST00000519623 TCEAL8Q8IYN2 117 aa13.57□□□□□ -0.24
CSMD1-205ENST00000519623 DDX12PQ92771 950 aa13.57□□□□□ -0.24
CSMD1-205ENST00000519623 CALML4Q96GE6 196 aa13.57□□□□□ -0.24
CSMD1-205ENST00000519623 AVENQ9NQS1 362 aaPredicted RBP13.57□□□□□ -0.24
CSMD1-205ENST00000519623 ARHGEF3Q9NR81 526 aa13.57□□□□□ -0.24
CSMD1-205ENST00000519623 DLGAP2Q9P1A6 1054 aa13.57□□□□□ -0.24
CSMD1-205ENST00000519623 TUBGCP4Q9UGJ1 667 aa13.57□□□□□ -0.24
CSMD1-205ENST00000519623 TBX20Q9UMR3 447 aa13.57□□□□□ -0.24
CSMD1-205ENST00000519623 DMDP11532 3685 aa13.57□□□□□ -0.24
CSMD1-205ENST00000519623 CACNA1IQ9P0X4 2223 aa13.56□□□□□ -0.24
CSMD1-205ENST00000519623 LACTBL1A8MY62 500 aa13.56□□□□□ -0.24
CSMD1-205ENST00000519623 M0QZQ0 153 aa13.56□□□□□ -0.24
CSMD1-205ENST00000519623 BMP15O95972 392 aa13.56□□□□□ -0.24
CSMD1-205ENST00000519623 PIGRP01833 764 aa13.56□□□□□ -0.24
CSMD1-205ENST00000519623 PTPN2P17706 415 aa13.56□□□□□ -0.24
CSMD1-205ENST00000519623 PLCG1P19174 1290 aa13.56□□□□□ -0.24
CSMD1-205ENST00000519623 LRPAP1P30533 357 aa13.56□□□□□ -0.24
CSMD1-205ENST00000519623 ELF1P32519 619 aa13.56□□□□□ -0.24
CSMD1-205ENST00000519623 LONP1P36776 959 aaKnown RBP13.56□□□□□ -0.24
CSMD1-205ENST00000519623 TNFSF9P41273 254 aa13.56□□□□□ -0.24
CSMD1-205ENST00000519623 ARPP19P56211 112 aa13.56□□□□□ -0.24
CSMD1-205ENST00000519623 STARD6P59095 220 aa13.56□□□□□ -0.24
CSMD1-205ENST00000519623 KARSQ15046 597 aaKnown RBP13.56□□□□□ -0.24
CSMD1-205ENST00000519623 ANGPT1Q15389 498 aa13.56□□□□□ -0.24
CSMD1-205ENST00000519623 SF3A1Q15459 793 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms