RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 SEZ6Q53EL9 994 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 TIGD5Q53EQ6 642 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 TCP11X2Q5H9J9 407 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 TCEAL5Q5H9L2 206 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 GLRA4Q5JXX5 417 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 HS2ST1Q7LGA3 356 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 APBB1IPQ7Z5R6 666 aaPredicted RBP8.25□□□□□ -1.09
SDCBP-206ENST00000519115 ADGRD2Q7Z7M1 963 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 SLC39A11Q8N1S5 342 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 CSGALNACT2Q8N6G5 542 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 GSTCDQ8NEC7 633 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 SCFD1Q8WVM8 642 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 RABGGTAQ92696 567 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 HPS3Q969F9 1004 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 TMEM169Q96HH4 297 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 HAPLN2Q9GZV7 340 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 LMAN2LQ9H0V9 348 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 MRPL44Q9H9J2 332 aaKnown RBP8.25□□□□□ -1.09
SDCBP-206ENST00000519115 PTPRHQ9HD43 1115 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 SLC39A2Q9NP94 309 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 UBN1Q9NPG3 1134 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 LMCD1Q9NZU5 365 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 KANSL3Q9P2N6 904 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 GIT1Q9Y2X7 761 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 PRG3Q9Y2Y8 225 aaPredicted RBP8.25□□□□□ -1.09
SDCBP-206ENST00000519115 DAAM1Q9Y4D1 1078 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 ZMYM2Q9UBW7 1377 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 PLXNA3P51805 1871 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 CASTOR2A6NHX0 329 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 ANKRD63C9JTQ0 380 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 PTGESO14684 152 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 PMM2O15305 246 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 INPPL1O15357 1258 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 SLC16A3O15427 465 aaKnown RBP8.24□□□□□ -1.09
SDCBP-206ENST00000519115 CLDN3O15551 220 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 GCNT3O95395 438 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 GALTP07902 379 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 MCF2P10911 925 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 GTF2F1P35269 517 aaKnown RBP eCLIP8.24□□□□□ -1.09
SDCBP-206ENST00000519115 TIE1P35590 1138 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 GRM5P41594 1212 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 OR1G1P47890 313 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 DSC1Q08554 894 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 KCNA1Q09470 495 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 ZBTB41Q5SVQ8 909 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 PLPP4Q5VZY2 271 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 ANKRD40Q6AI12 368 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 ISM2Q6H9L7 571 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 SLC39A4Q6P5W5 647 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 ZPBP2Q6X784 338 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 APTXQ7Z2E3 356 aaKnown RBP8.24□□□□□ -1.09
SDCBP-206ENST00000519115 FRMD5Q7Z6J6 570 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 IRF2BP1Q8IU81 584 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 MAP4K3Q8IVH8 894 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 COLGALT2Q8IYK4 626 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 GLIS3Q8NEA6 775 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 MICAL1Q8TDZ2 1067 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 RSPH1Q8WYR4 309 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 IGSF21Q96ID5 467 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 ACCSQ96QU6 501 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 DUSP9Q99956 384 aaKnown RBP8.24□□□□□ -1.09
SDCBP-206ENST00000519115 CCDC94Q9BW85 323 aaPredicted RBP8.24□□□□□ -1.09
SDCBP-206ENST00000519115 SRRTQ9BXP5 876 aaKnown RBP8.24□□□□□ -1.09
SDCBP-206ENST00000519115 EDEM3Q9BZQ6 932 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 NSUN3Q9H649 340 aaKnown RBP8.24□□□□□ -1.09
SDCBP-206ENST00000519115 KIAA1586Q9HCI6 787 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 ENTPD7Q9NQZ7 604 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 TLR9Q9NR96 1032 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 DMAC2Q9NW81 257 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 MAGEC2Q9UBF1 373 aaPredicted RBP8.24□□□□□ -1.09
SDCBP-206ENST00000519115 ITIH6Q6UXX5 1313 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 SCN1AP35498 2009 aa8.24□□□□□ -1.09
SDCBP-206ENST00000519115 NRP1O14786 923 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 MEFVO15553 781 aaPredicted RBP8.23□□□□□ -1.09
SDCBP-206ENST00000519115 ATMINO43313 823 aaPredicted RBP8.23□□□□□ -1.09
SDCBP-206ENST00000519115 PRPF6O94906 941 aaKnown RBP8.23□□□□□ -1.09
SDCBP-206ENST00000519115 SERPINC1P01008 464 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 PIGRP01833 764 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 CXCL8P10145 99 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 CA8P35219 290 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 TNFSF9P41273 254 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 YARSP54577 528 aaKnown RBP8.23□□□□□ -1.09
SDCBP-206ENST00000519115 ERVFC1P60507 584 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 PLCB3Q01970 1234 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 TFF2Q03403 129 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 KRT17Q04695 432 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 UBE3AQ05086 875 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 MCL1Q07820 350 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 ADAM9Q13443 819 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 TRIM14Q14142 442 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 FIGNQ5HY92 759 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 SLFN12LQ6IEE8 588 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 EP400NLQ6ZTU2 488 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 USP37Q86T82 979 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 RBM23Q86U06 439 aaKnown RBP8.23□□□□□ -1.09
SDCBP-206ENST00000519115 VPS52Q8N1B4 723 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 TMEM130Q8N3G9 435 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 HASPINQ8TF76 798 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 AUTS2Q8WXX7 1259 aa8.23□□□□□ -1.09
SDCBP-206ENST00000519115 RNF25Q96BH1 459 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms