RNA–Protein interactions for RNA: ENST00000518387.1

CTD-2270F17.1-201, humanhuman

TSL 1 (best) BASIC

Gene CTD-2270F17.1, Length 1,215 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTD-2270F17.1-201ENST00000518387 RPF1Q9H9Y2 349 aaKnown RBP11.8□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 MRPL17Q9NRX2 175 aaKnown RBP11.8□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 SLC38A7Q9NVC3 462 aa11.8□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 CNTN3Q9P232 1028 aa11.8□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 AGO2Q9UKV8 859 aaKnown RBP11.8□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 HPSEQ9Y251 543 aa11.8□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 SPTBN5Q9NRC6 3674 aaKnown RBP11.8□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 C5orf42Q9H799 3197 aa11.8□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 SF3B1O75533 1304 aaKnown RBP eCLIP11.8□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 MTCL1Q9Y4B5 1905 aaKnown RBP11.8□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 A0A1W2PQ27 194 aa11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 A0A1W2PQ64 194 aa11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 A0A1W2PQD8 194 aa11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 GOLGA8IPA6NC78 632 aa11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 GOLGA8JA6NMD2 632 aa11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 I3L4J1 428 aa11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 PODXLO00592 558 aa11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 FAM189A1O60320 539 aa11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 CLASP2O75122 1294 aaKnown RBP11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 B3GAT3O94766 335 aa11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 SRGAP2BP0DMP2 458 aa11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 IL9P15248 144 aa11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 IGFBP6P24592 240 aaPredicted RBP11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 GUCY2FP51841 1108 aa11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 ALCAMQ13740 583 aa11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 COL19A1Q14993 1142 aa11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 LEXMQ3ZCV2 418 aa11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 FAM171A1Q5VUB5 890 aa11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 SLFN12LQ6IEE8 588 aa11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 ARMCX5Q6P1M9 558 aa11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 ALKAL1Q6UXT8 129 aa11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 C3orf58Q8NDZ4 430 aa11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 ZSWIM2Q8NEG5 633 aa11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 RIN2Q8WYP3 895 aaPredicted RBP11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 CDCA3Q99618 268 aaPredicted RBP11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 COL25A1Q9BXS0 654 aaPredicted RBP11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 EMILIN2Q9BXX0 1053 aa11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 PCIF1Q9H4Z3 704 aa11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 SLC39A2Q9NP94 309 aa11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 CLEC1BQ9P126 229 aa11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 CD207Q9UJ71 328 aa11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 HCFC2Q9Y5Z7 792 aa11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 SCN1AP35498 2009 aa11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 TSC2P49815 1807 aa11.79□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 TTC26A0AVF1 554 aa11.78□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 LACTBL1A8MY62 500 aa11.78□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 NFICP08651 508 aa11.78□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 CNPP09543 421 aaKnown RBP11.78□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 KCNE1P15382 129 aa11.78□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 EPCAMP16422 314 aa11.78□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 RPL17P18621 184 aaKnown RBP11.78□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 KLRC2P26717 231 aa11.78□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 ADSSP30520 456 aa11.78□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 BRCC3P46736 316 aa11.78□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 KYAT1Q16773 422 aa11.78□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 UPP1Q16831 310 aa11.78□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 USP41Q3LFD5 358 aa11.78□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 XKR4Q5GH76 650 aa11.78□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 RTP2Q5QGT7 225 aa11.78□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 JADE1Q6IE81 842 aa11.78□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 CNNM4Q6P4Q7 775 aa11.78□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 PRSS55Q6UWB4 352 aaPredicted RBP11.78□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 RNF168Q8IYW5 571 aaPredicted RBP11.78□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 UROC1Q96N76 676 aa11.78□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 CBWD1Q9BRT8 395 aa11.78□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 FAM213AQ9BRX8 229 aa11.78□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 TMEM206Q9H813 350 aa11.78□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 EXOC1Q9NV70 894 aa11.78□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 STK39Q9UEW8 545 aa11.78□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 USP25Q9UHP3 1055 aa11.78□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 CPSF3Q9UKF6 684 aaKnown RBP11.78□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 NUB1Q9Y5A7 615 aa11.78□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 VCANP13611 3396 aa11.78□□□□□ -0.52
CTD-2270F17.1-201ENST00000518387 FSD2A1L4K1 749 aa11.77□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 DLL1O00548 723 aa11.77□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 KLRC4O43908 158 aa11.77□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 ZNF202O95125 648 aa11.77□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 BMP1P13497 986 aa11.77□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 MCM4P33991 863 aa11.77□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 DSG1Q02413 1049 aa11.77□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 POSTNQ15063 836 aa11.77□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 KMT5BQ4FZB7 885 aa11.77□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 KRBA2Q6ZNG9 492 aa11.77□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 CASP10Q92851 521 aa11.77□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 KLHL5Q96PQ7 755 aa11.77□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 UHRF1Q96T88 793 aaPredicted RBP11.77□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 PLEKHA5Q9HAU0 1116 aa11.77□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 SSX2IPQ9Y2D8 614 aa11.77□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 IRAK3Q9Y616 596 aa11.77□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 STYXL1Q9Y6J8 313 aa11.77□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 FAM237AA0A1B0GTK4 181 aa11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 PVALEFA0A1B0GWK0 134 aa11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 GRXCR2A6NFK2 248 aa11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 TMEM189-UBE2V1I3L0A0 370 aa11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 EIF3DO15371 548 aaKnown RBP eCLIP11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 TEX28O15482 410 aa11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 MBTPS2O43462 519 aa11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 XPOTO43592 962 aaKnown RBP11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 EFEMP2O95967 443 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms