RNA–Protein interactions for RNA: ENST00000517940.1

AP3B1-203, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 2

Gene AP3B1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-203ENST00000517940 LRPAP1P30533 357 aa12.81□□□□□ -0.36
AP3B1-203ENST00000517940 PSMC2P35998 433 aaKnown RBP12.81□□□□□ -0.36
AP3B1-203ENST00000517940 CLCNKBP51801 687 aa12.81□□□□□ -0.36
AP3B1-203ENST00000517940 ERVK-21P61565 698 aa12.81□□□□□ -0.36
AP3B1-203ENST00000517940 BFSP1Q12934 665 aa12.81□□□□□ -0.36
AP3B1-203ENST00000517940 TUSC3Q13454 348 aa12.81□□□□□ -0.36
AP3B1-203ENST00000517940 TMEM132DQ14C87 1099 aa12.81□□□□□ -0.36
AP3B1-203ENST00000517940 UPP1Q16831 310 aa12.81□□□□□ -0.36
AP3B1-203ENST00000517940 HSP90AA4PQ58FG1 418 aa12.81□□□□□ -0.36
AP3B1-203ENST00000517940 TDRD10Q5VZ19 366 aaKnown RBP12.81□□□□□ -0.36
AP3B1-203ENST00000517940 LRSAM1Q6UWE0 723 aa12.81□□□□□ -0.36
AP3B1-203ENST00000517940 GAS2L3Q86XJ1 694 aa12.81□□□□□ -0.36
AP3B1-203ENST00000517940 TRIM59Q8IWR1 403 aa12.81□□□□□ -0.36
AP3B1-203ENST00000517940 RNF168Q8IYW5 571 aaPredicted RBP12.81□□□□□ -0.36
AP3B1-203ENST00000517940 ABI1Q8IZP0 508 aa12.81□□□□□ -0.36
AP3B1-203ENST00000517940 SLC39A11Q8N1S5 342 aa12.81□□□□□ -0.36
AP3B1-203ENST00000517940 FIBCD1Q8N539 461 aa12.81□□□□□ -0.36
AP3B1-203ENST00000517940 AOPEPQ8N6M6 819 aa12.81□□□□□ -0.36
AP3B1-203ENST00000517940 URGCPQ8TCY9 931 aa12.81□□□□□ -0.36
AP3B1-203ENST00000517940 TMC2Q8TDI7 906 aa12.81□□□□□ -0.36
AP3B1-203ENST00000517940 ELMO3Q96BJ8 720 aa12.81□□□□□ -0.36
AP3B1-203ENST00000517940 CNOT6LQ96LI5 555 aaKnown RBP12.81□□□□□ -0.36
AP3B1-203ENST00000517940 RPS6KC1Q96S38 1066 aa12.81□□□□□ -0.36
AP3B1-203ENST00000517940 MRPL9Q9BYD2 267 aaKnown RBP12.81□□□□□ -0.36
AP3B1-203ENST00000517940 CBX8Q9HC52 389 aa12.81□□□□□ -0.36
AP3B1-203ENST00000517940 FANCLQ9NW38 375 aa12.81□□□□□ -0.36
AP3B1-203ENST00000517940 C5orf67F2Z3F1 127 aa12.8□□□□□ -0.36
AP3B1-203ENST00000517940 PIRO00625 290 aa12.8□□□□□ -0.36
AP3B1-203ENST00000517940 NRP1O14786 923 aa12.8□□□□□ -0.36
AP3B1-203ENST00000517940 LPXNO60711 386 aa12.8□□□□□ -0.36
AP3B1-203ENST00000517940 DLATP10515 647 aaKnown RBP12.8□□□□□ -0.36
AP3B1-203ENST00000517940 VAMP7P51809 220 aa12.8□□□□□ -0.36
AP3B1-203ENST00000517940 ENPEPQ07075 957 aa12.8□□□□□ -0.36
AP3B1-203ENST00000517940 CAMK1Q14012 370 aa12.8□□□□□ -0.36
AP3B1-203ENST00000517940 RAB30Q15771 203 aa12.8□□□□□ -0.36
AP3B1-203ENST00000517940 ZACNQ401N2 412 aa12.8□□□□□ -0.36
AP3B1-203ENST00000517940 CBWD6Q4V339 395 aa12.8□□□□□ -0.36
AP3B1-203ENST00000517940 EPC2Q52LR7 807 aa12.8□□□□□ -0.36
AP3B1-203ENST00000517940 CBWD3Q5JTY5 395 aa12.8□□□□□ -0.36
AP3B1-203ENST00000517940 HABP4Q5JVS0 413 aaKnown RBP12.8□□□□□ -0.36
AP3B1-203ENST00000517940 MIIPQ5JXC2 388 aa12.8□□□□□ -0.36
AP3B1-203ENST00000517940 CBWD5Q5RIA9 395 aa12.8□□□□□ -0.36
AP3B1-203ENST00000517940 C9orf57Q5W0N0 161 aa12.8□□□□□ -0.36
AP3B1-203ENST00000517940 KCNT2Q6UVM3 1135 aa12.8□□□□□ -0.36
AP3B1-203ENST00000517940 WDR49Q8IV35 697 aa12.8□□□□□ -0.36
AP3B1-203ENST00000517940 CD302Q8IX05 232 aa12.8□□□□□ -0.36
AP3B1-203ENST00000517940 RSPH1Q8WYR4 309 aa12.8□□□□□ -0.36
AP3B1-203ENST00000517940 TIFAQ96CG3 184 aa12.8□□□□□ -0.36
AP3B1-203ENST00000517940 CERS4Q9HA82 394 aa12.8□□□□□ -0.36
AP3B1-203ENST00000517940 DACH1Q9UI36 760 aa12.8□□□□□ -0.36
AP3B1-203ENST00000517940 UBQLN1Q9UMX0 589 aaKnown RBP12.8□□□□□ -0.36
AP3B1-203ENST00000517940 FRMD4BQ9Y2L6 1034 aa12.8□□□□□ -0.36
AP3B1-203ENST00000517940 PRG3Q9Y2Y8 225 aaPredicted RBP12.8□□□□□ -0.36
AP3B1-203ENST00000517940 TMEM189-UBE2V1I3L0A0 370 aa12.79□□□□□ -0.36
AP3B1-203ENST00000517940 PODXLO00592 558 aa12.79□□□□□ -0.36
AP3B1-203ENST00000517940 CST3P01034 146 aaPredicted RBP12.79□□□□□ -0.36
AP3B1-203ENST00000517940 EPB41P11171 864 aaKnown RBP12.79□□□□□ -0.36
AP3B1-203ENST00000517940 ATP1A3P13637 1013 aa12.79□□□□□ -0.36
AP3B1-203ENST00000517940 CYP3A5P20815 502 aa12.79□□□□□ -0.36
AP3B1-203ENST00000517940 BMPR1AP36894 532 aa12.79□□□□□ -0.36
AP3B1-203ENST00000517940 AARSP49588 968 aaKnown RBP eCLIP12.79□□□□□ -0.36
AP3B1-203ENST00000517940 ZNF165P49910 485 aa12.79□□□□□ -0.36
AP3B1-203ENST00000517940 TFAMQ00059 246 aaKnown RBP12.79□□□□□ -0.36
AP3B1-203ENST00000517940 MYL5Q02045 173 aa12.79□□□□□ -0.36
AP3B1-203ENST00000517940 INTS8Q75QN2 995 aaKnown RBP12.79□□□□□ -0.36
AP3B1-203ENST00000517940 SV2AQ7L0J3 742 aa12.79□□□□□ -0.36
AP3B1-203ENST00000517940 TAS1R1Q7RTX1 841 aa12.79□□□□□ -0.36
AP3B1-203ENST00000517940 TRAPPC11Q7Z392 1133 aa12.79□□□□□ -0.36
AP3B1-203ENST00000517940 FRMD5Q7Z6J6 570 aa12.79□□□□□ -0.36
AP3B1-203ENST00000517940 LUZP1Q86V48 1076 aa12.79□□□□□ -0.36
AP3B1-203ENST00000517940 HASPINQ8TF76 798 aa12.79□□□□□ -0.36
AP3B1-203ENST00000517940 SEMA4DQ92854 862 aa12.79□□□□□ -0.36
AP3B1-203ENST00000517940 TMEM175Q9BSA9 504 aa12.79□□□□□ -0.36
AP3B1-203ENST00000517940 XYLT2Q9H1B5 865 aa12.79□□□□□ -0.36
AP3B1-203ENST00000517940 THAP9Q9H5L6 903 aa12.79□□□□□ -0.36
AP3B1-203ENST00000517940 RNF216Q9NWF9 866 aaPredicted RBP12.79□□□□□ -0.36
AP3B1-203ENST00000517940 KANSL3Q9P2N6 904 aa12.79□□□□□ -0.36
AP3B1-203ENST00000517940 MTUS1Q9ULD2 1270 aa12.79□□□□□ -0.36
AP3B1-203ENST00000517940 RFXAPO00287 272 aa12.78□□□□□ -0.36
AP3B1-203ENST00000517940 IKBKBO14920 756 aa12.78□□□□□ -0.36
AP3B1-203ENST00000517940 ITGB3P05106 788 aa12.78□□□□□ -0.36
AP3B1-203ENST00000517940 LAG3P18627 525 aa12.78□□□□□ -0.36
AP3B1-203ENST00000517940 POLR2BP30876 1174 aaKnown RBP12.78□□□□□ -0.36
AP3B1-203ENST00000517940 CTNNB1P35222 781 aa12.78□□□□□ -0.36
AP3B1-203ENST00000517940 BRCC3P46736 316 aa12.78□□□□□ -0.36
AP3B1-203ENST00000517940 OR1G1P47890 313 aa12.78□□□□□ -0.36
AP3B1-203ENST00000517940 GCLMP48507 274 aa12.78□□□□□ -0.36
AP3B1-203ENST00000517940 RNASELQ05823 741 aaKnown RBP12.78□□□□□ -0.36
AP3B1-203ENST00000517940 HSP90AA2PQ14568 343 aaPredicted RBP12.78□□□□□ -0.36
AP3B1-203ENST00000517940 PPP2R2DQ66LE6 453 aa12.78□□□□□ -0.36
AP3B1-203ENST00000517940 DPY19L2P1Q6NXN4 242 aa12.78□□□□□ -0.36
AP3B1-203ENST00000517940 NT5DC4Q86YG4 428 aa12.78□□□□□ -0.36
AP3B1-203ENST00000517940 KLHL23Q8NBE8 558 aa12.78□□□□□ -0.36
AP3B1-203ENST00000517940 TAS1R2Q8TE23 839 aa12.78□□□□□ -0.36
AP3B1-203ENST00000517940 IGSF21Q96ID5 467 aa12.78□□□□□ -0.36
AP3B1-203ENST00000517940 TGS1Q96RS0 853 aaKnown RBP12.78□□□□□ -0.36
AP3B1-203ENST00000517940 TSPAN18Q96SJ8 248 aa12.78□□□□□ -0.36
AP3B1-203ENST00000517940 GPR62Q9BZJ7 368 aa12.78□□□□□ -0.36
AP3B1-203ENST00000517940 DPP3Q9NY33 737 aa12.78□□□□□ -0.36
AP3B1-203ENST00000517940 ARMCX3Q9UH62 379 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms