RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 ASTN1O14525 1302 aa6.39□□□□□ -1.39
CD47-205ENST00000517766 MYH10P35580 1976 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 SSU72P8A0A1W2PR75 194 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 MAPK13O15264 365 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 TGFB1I1O43294 461 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 KRT86O43790 486 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 USO1O60763 962 aaKnown RBP6.38□□□□□ -1.39
CD47-205ENST00000517766 SMNDC1O75940 238 aaKnown RBP eCLIP6.38□□□□□ -1.39
CD47-205ENST00000517766 CCNE2O96020 404 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 CELA3AP09093 270 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 ARAFP10398 606 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 TGFB3P10600 412 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 HOXD13P35453 343 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 KLK7P49862 253 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 NCKAP1LP55160 1127 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 RTP1P59025 263 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 HERVK_113P62684 666 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 GTF2BQ00403 316 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 FAAP100Q0VG06 881 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 MAPK7Q13164 816 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 NEDD9Q14511 834 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 MTF1Q14872 753 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 PPP2R5AQ15172 486 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 SPA17Q15506 151 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 GPR162Q16538 588 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 SLC9C1Q4G0N8 1177 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 XKR9Q5GH70 373 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 SFMBT2Q5VUG0 894 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 PSAPL1Q6NUJ1 521 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 PDXDC1Q6P996 788 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 WDR59Q6PJI9 974 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 FMNL3Q8IVF7 1028 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 FAM186BQ8IYM0 893 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 SYCP3Q8IZU3 236 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 MCPH1Q8NEM0 835 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 SHCBP1Q8NEM2 672 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 KIFAP3Q92845 792 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 OPTNQ96CV9 577 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 CCDC42Q96M95 316 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 CHP1Q99653 195 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 LSM14BQ9BX40 385 aaKnown RBP6.38□□□□□ -1.39
CD47-205ENST00000517766 BHLHE41Q9C0J9 482 aaPredicted RBP6.38□□□□□ -1.39
CD47-205ENST00000517766 TGIF2Q9GZN2 237 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 ASCC2Q9H1I8 757 aaPredicted RBP6.38□□□□□ -1.39
CD47-205ENST00000517766 DEF6Q9H4E7 631 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 MROH8Q9H579 483 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 TAF1DQ9H5J8 278 aaPredicted RBP6.38□□□□□ -1.39
CD47-205ENST00000517766 NHEJ1Q9H9Q4 299 aaPredicted RBP6.38□□□□□ -1.39
CD47-205ENST00000517766 SRA1Q9HD15 236 aaKnown RBP6.38□□□□□ -1.39
CD47-205ENST00000517766 LUC7LQ9NQ29 371 aaKnown RBP6.38□□□□□ -1.39
CD47-205ENST00000517766 PLCB1Q9NQ66 1216 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 DMAC2Q9NW81 257 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 BTBD7Q9P203 1132 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 GABBR1Q9UBS5 961 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 DDX41Q9UJV9 622 aaKnown RBP6.38□□□□□ -1.39
CD47-205ENST00000517766 FBXL5Q9UKA1 691 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 MYO6Q9UM54 1294 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 PPME1Q9Y570 386 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 TRPM7Q96QT4 1865 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 MCM3APO60318 1980 aa6.38□□□□□ -1.39
CD47-205ENST00000517766 ZMYM2Q9UBW7 1377 aa6.37□□□□□ -1.39
CD47-205ENST00000517766 IGSF9BQ9UPX0 1349 aa6.37□□□□□ -1.39
CD47-205ENST00000517766 CLIC2O15247 247 aa6.37□□□□□ -1.39
CD47-205ENST00000517766 HYAL3O43820 417 aaPredicted RBP6.37□□□□□ -1.39
CD47-205ENST00000517766 N4BP1O75113 896 aaKnown RBP6.37□□□□□ -1.39
CD47-205ENST00000517766 AKAP3O75969 853 aa6.37□□□□□ -1.39
CD47-205ENST00000517766 URI1O94763 535 aaPredicted RBP6.37□□□□□ -1.39
CD47-205ENST00000517766 LCA5LO95447 670 aa6.37□□□□□ -1.39
CD47-205ENST00000517766 SERPING1P05155 500 aa6.37□□□□□ -1.39
CD47-205ENST00000517766 SUPT20HL2P0C7V6 817 aa6.37□□□□□ -1.39
CD47-205ENST00000517766 KRT13P13646 458 aa6.37□□□□□ -1.39
CD47-205ENST00000517766 EDNRBP24530 442 aa6.37□□□□□ -1.39
CD47-205ENST00000517766 ST13P50502 369 aaKnown RBP6.37□□□□□ -1.39
CD47-205ENST00000517766 ACTR2P61160 394 aa6.37□□□□□ -1.39
CD47-205ENST00000517766 FKBP1BP68106 108 aa6.37□□□□□ -1.39
CD47-205ENST00000517766 TUBB4BP68371 445 aa6.37□□□□□ -1.39
CD47-205ENST00000517766 CETN1Q12798 172 aa6.37□□□□□ -1.39
CD47-205ENST00000517766 DMP1Q13316 513 aaPredicted RBP6.37□□□□□ -1.39
CD47-205ENST00000517766 SNAPC2Q13487 334 aa6.37□□□□□ -1.39
CD47-205ENST00000517766 LRP8Q14114 963 aa6.37□□□□□ -1.39
CD47-205ENST00000517766 HSP90AA2PQ14568 343 aaPredicted RBP6.37□□□□□ -1.39
CD47-205ENST00000517766 UGCGQ16739 394 aa6.37□□□□□ -1.39
CD47-205ENST00000517766 EXOC3L4Q17RC7 722 aa6.37□□□□□ -1.39
CD47-205ENST00000517766 XKR3Q5GH77 459 aa6.37□□□□□ -1.39
CD47-205ENST00000517766 FAM160B1Q5W0V3 765 aa6.37□□□□□ -1.39
CD47-205ENST00000517766 SWSAP1Q6NVH7 229 aa6.37□□□□□ -1.39
CD47-205ENST00000517766 ABHD15Q6UXT9 468 aa6.37□□□□□ -1.39
CD47-205ENST00000517766 GBP6Q6ZN66 633 aa6.37□□□□□ -1.39
CD47-205ENST00000517766 RRAGAQ7L523 313 aa6.37□□□□□ -1.39
CD47-205ENST00000517766 KIAA1328Q86T90 577 aa6.37□□□□□ -1.39
CD47-205ENST00000517766 DAW1Q8N136 415 aa6.37□□□□□ -1.39
CD47-205ENST00000517766 FAM133AQ8N9E0 248 aa6.37□□□□□ -1.39
CD47-205ENST00000517766 ACRBPQ8NEB7 543 aa6.37□□□□□ -1.39
CD47-205ENST00000517766 SMCR8Q8TEV9 937 aaPredicted RBP6.37□□□□□ -1.39
CD47-205ENST00000517766 KCNN1Q92952 543 aa6.37□□□□□ -1.39
CD47-205ENST00000517766 CLMNQ96JQ2 1002 aa6.37□□□□□ -1.39
CD47-205ENST00000517766 CEP170P1Q96L14 293 aa6.37□□□□□ -1.39
CD47-205ENST00000517766 MAP7D2Q96T17 732 aa6.37□□□□□ -1.39
CD47-205ENST00000517766 LPIN3Q9BQK8 851 aa6.37□□□□□ -1.39
CD47-205ENST00000517766 NTPCRQ9BSD7 190 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms