RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 VRTNQ9H8Y1 702 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 THSD1Q9NS62 852 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 GALNT8Q9NY28 637 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ZNF581Q9P0T4 197 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SH3BP4Q9P0V3 963 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CLEC1BQ9P126 229 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 USP36Q9P275 1121 aaKnown RBP-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ARHGAP28Q9P2N2 729 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 UTS2RQ9UKP6 389 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ST3GAL5Q9UNP4 418 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SCAF8Q9UPN6 1271 aaKnown RBP-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 HDAC5Q9UQL6 1122 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 DLGAP4Q9Y2H0 992 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 USP15Q9Y4E8 981 aaPredicted RBP-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 NUB1Q9Y5A7 615 aa-0.35□□□□□ -2.47
RNU6-1238P-201ENST00000517215 FLG2Q5D862 2391 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 IGLV3-10A0A075B6K4 115 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 HMX3A6NHT5 357 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 C9IYK1 514 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ADM5C9JUS6 153 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ACOT7O00154 380 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 NRP1O14786 923 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 KIF1CO43896 1103 aaKnown RBP-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ERN1O75460 977 aaKnown RBP-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 TCEA3O75764 348 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 URI1O94763 535 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 KRT6AP02538 564 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 KRT6BP04259 564 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 FGF2P09038 288 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CD247P20963 164 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 DRD3P35462 400 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 MLH1P40692 756 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 IARSP41252 1262 aaKnown RBP-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 KRT6CP48668 564 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 HOXA1P49639 335 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CCT8P50990 548 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 LUMP51884 338 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 AMPD2Q01433 879 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 GHRHRQ02643 423 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 EEF1A2Q05639 463 aaKnown RBP-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CKAP4Q07065 602 aaKnown RBP-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 PTPRRQ15256 657 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 TXNRD1Q16881 649 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 RBM20Q5T481 1227 aaKnown RBP-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 STPG1Q5TH74 334 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 MEX3CQ5U5Q3 659 aaKnown RBP-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 AGAP9Q5VTM2 703 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 OVOS1Q6IE37 1185 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 IQCEQ6IPM2 695 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 NAPEPLDQ6IQ20 393 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ABHD15Q6UXT9 468 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 Q6ZR54 194 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 C16orf82Q7Z2V1 217 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 PNPLA5Q7Z6Z6 429 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CCDC84Q86UT8 332 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ANKRD13BQ86YJ7 626 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 RHOT2Q8IXI1 618 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CCDC144CPQ8IYA2 1237 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CCDC185Q8N715 623 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 PNLDC1Q8NA58 520 aaKnown RBP-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 PLA2G15Q8NCC3 412 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 OR56A1Q8NGH5 318 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 UHMK1Q8TAS1 419 aaKnown RBP-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 FBXL20Q96IG2 436 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 NLRP4Q96MN2 994 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SIGLEC11Q96RL6 698 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SETDB2Q96T68 719 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 NEU1Q99519 415 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 MTFR1LQ9H019 292 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ZSWIM4Q9H7M6 989 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ZNF696Q9H7X3 374 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CNNM2Q9H8M5 875 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SLC6A20Q9NP91 592 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 NCDNQ9UBB6 729 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 TFIP11Q9UBB9 837 aaKnown RBP-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SUCOQ9UBS9 1254 aaKnown RBP-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 KCNE5Q9UJ90 142 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 FBXL7Q9UJT9 491 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ZNRF3Q9ULT6 936 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 EFR3BQ9Y2G0 817 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ATP11BQ9Y2G3 1177 aa-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 POLR3KQ9Y2Y1 108 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-1238P-201ENST00000517215 LOC102724159A0A0B4J2E5 919 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 FAM83GA6ND36 823 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 RSPH10B2B2RC85 870 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ZNF213O14771 459 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 DSCR3O14972 297 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 LATO43561 262 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 LMX1BO60663 402 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 ARIH2O95376 493 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 TTLL1O95922 423 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 FRMD6-AS1P0C7T7 363 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 RSPH10BP0C881 870 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 SRGNP10124 158 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CYP19A1P11511 503 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 CD99P14209 185 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 TFE3P19532 575 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 GATA2P23769 480 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 PCSK6P29122 969 aa-0.37□□□□□ -2.47
RNU6-1238P-201ENST00000517215 THBS4P35443 961 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms