RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 FXR1P51114 621 aaKnown RBP eCLIP6.92□□□□□ -1.3
SCARNA1-201ENST00000517138 INHBCP55103 352 aa6.92□□□□□ -1.3
SCARNA1-201ENST00000517138 HSD11B2P80365 405 aa6.92□□□□□ -1.3
SCARNA1-201ENST00000517138 CDC42EP1Q00587 391 aa6.92□□□□□ -1.3
SCARNA1-201ENST00000517138 COL10A1Q03692 680 aa6.92□□□□□ -1.3
SCARNA1-201ENST00000517138 SLFN5Q08AF3 891 aa6.92□□□□□ -1.3
SCARNA1-201ENST00000517138 PTPAQ15257 358 aa6.92□□□□□ -1.3
SCARNA1-201ENST00000517138 FLYWCH1Q4VC44 716 aa6.92□□□□□ -1.3
SCARNA1-201ENST00000517138 MRGPRGQ86SM5 289 aa6.92□□□□□ -1.3
SCARNA1-201ENST00000517138 RSPH3Q86UC2 560 aa6.92□□□□□ -1.3
SCARNA1-201ENST00000517138 ARHGEF19Q8IW93 802 aa6.92□□□□□ -1.3
SCARNA1-201ENST00000517138 TMEM132CQ8N3T6 1108 aa6.92□□□□□ -1.3
SCARNA1-201ENST00000517138 BEND2Q8NDZ0 799 aa6.92□□□□□ -1.3
SCARNA1-201ENST00000517138 ZCRB1Q8TBF4 217 aaKnown RBP6.92□□□□□ -1.3
SCARNA1-201ENST00000517138 MARS2Q96GW9 593 aaKnown RBP6.92□□□□□ -1.3
SCARNA1-201ENST00000517138 C11orf54Q9H0W9 315 aaPredicted RBP6.92□□□□□ -1.3
SCARNA1-201ENST00000517138 VSX1Q9NZR4 365 aaPredicted RBP6.92□□□□□ -1.3
SCARNA1-201ENST00000517138 HSFX1Q9UBD0 423 aa6.92□□□□□ -1.3
SCARNA1-201ENST00000517138 DMRT1Q9Y5R6 373 aa6.92□□□□□ -1.3
SCARNA1-201ENST00000517138 GRM6O15303 877 aa6.91□□□□□ -1.3
SCARNA1-201ENST00000517138 TEX33O43247 280 aa6.91□□□□□ -1.3
SCARNA1-201ENST00000517138 ZFPL1O95159 310 aa6.91□□□□□ -1.3
SCARNA1-201ENST00000517138 SPATA31D3P0C874 917 aa6.91□□□□□ -1.3
SCARNA1-201ENST00000517138 PROZP22891 400 aa6.91□□□□□ -1.3
SCARNA1-201ENST00000517138 CCND1P24385 295 aa6.91□□□□□ -1.3
SCARNA1-201ENST00000517138 BMPR1AP36894 532 aa6.91□□□□□ -1.3
SCARNA1-201ENST00000517138 DSC2Q02487 901 aa6.91□□□□□ -1.3
SCARNA1-201ENST00000517138 SCAPQ12770 1279 aa6.91□□□□□ -1.3
SCARNA1-201ENST00000517138 DACT2Q5SW24 774 aa6.91□□□□□ -1.3
SCARNA1-201ENST00000517138 SPATA31D4Q6ZUB0 917 aa6.91□□□□□ -1.3
SCARNA1-201ENST00000517138 STAG1Q8WVM7 1258 aa6.91□□□□□ -1.3
SCARNA1-201ENST00000517138 NACC2Q96BF6 587 aa6.91□□□□□ -1.3
SCARNA1-201ENST00000517138 CLPTM1LQ96KA5 538 aa6.91□□□□□ -1.3
SCARNA1-201ENST00000517138 SLC45A2Q9UMX9 530 aa6.91□□□□□ -1.3
SCARNA1-201ENST00000517138 NOP58Q9Y2X3 529 aaKnown RBP6.91□□□□□ -1.3
SCARNA1-201ENST00000517138 LRRC14BA6NHZ5 514 aa6.9□□□□□ -1.3
SCARNA1-201ENST00000517138 RAMP2O60895 175 aa6.9□□□□□ -1.3
SCARNA1-201ENST00000517138 ADKP55263 362 aaKnown RBP6.9□□□□□ -1.3
SCARNA1-201ENST00000517138 TLE1Q04724 770 aa6.9□□□□□ -1.3
SCARNA1-201ENST00000517138 Q6YL49 198 aa6.9□□□□□ -1.3
SCARNA1-201ENST00000517138 TBC1D15Q8TC07 691 aa6.9□□□□□ -1.3
SCARNA1-201ENST00000517138 PRRX2Q99811 253 aa6.9□□□□□ -1.3
SCARNA1-201ENST00000517138 VRK1Q99986 396 aaPredicted RBP6.9□□□□□ -1.3
SCARNA1-201ENST00000517138 BRINP2Q9C0B6 783 aa6.9□□□□□ -1.3
SCARNA1-201ENST00000517138 CKBP12277 381 aa6.89□□□□□ -1.31
SCARNA1-201ENST00000517138 FCER1AP12319 257 aa6.89□□□□□ -1.31
SCARNA1-201ENST00000517138 GUCY1B3Q02153 619 aa6.89□□□□□ -1.31
SCARNA1-201ENST00000517138 CREMQ03060 361 aa6.89□□□□□ -1.31
SCARNA1-201ENST00000517138 CRB2Q5IJ48 1285 aa6.89□□□□□ -1.31
SCARNA1-201ENST00000517138 CMTR2Q8IYT2 770 aaKnown RBP6.89□□□□□ -1.31
SCARNA1-201ENST00000517138 FITM2Q8N6M3 262 aa6.89□□□□□ -1.31
SCARNA1-201ENST00000517138 TLR10Q9BXR5 811 aa6.89□□□□□ -1.31
SCARNA1-201ENST00000517138 ALOXE3Q9BYJ1 711 aa6.89□□□□□ -1.31
SCARNA1-201ENST00000517138 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.89□□□□□ -1.31
SCARNA1-201ENST00000517138 WDR33Q9C0J8 1336 aaKnown RBP6.88□□□□□ -1.31
SCARNA1-201ENST00000517138 SGTAO43765 313 aa6.88□□□□□ -1.31
SCARNA1-201ENST00000517138 CDKL5O76039 1030 aa6.88□□□□□ -1.31
SCARNA1-201ENST00000517138 CD1AP06126 327 aa6.88□□□□□ -1.31
SCARNA1-201ENST00000517138 CXADRP78310 365 aa6.88□□□□□ -1.31
SCARNA1-201ENST00000517138 KRTAP15-1Q3LI76 137 aa6.88□□□□□ -1.31
SCARNA1-201ENST00000517138 GPR149Q86SP6 731 aa6.88□□□□□ -1.31
SCARNA1-201ENST00000517138 NSUN6Q8TEA1 469 aaKnown RBP6.88□□□□□ -1.31
SCARNA1-201ENST00000517138 RNF31Q96EP0 1072 aa6.88□□□□□ -1.31
SCARNA1-201ENST00000517138 RNPEPQ9H4A4 650 aa6.88□□□□□ -1.31
SCARNA1-201ENST00000517138 SLITRK6Q9H5Y7 841 aa6.88□□□□□ -1.31
SCARNA1-201ENST00000517138 SYBUQ9NX95 663 aa6.88□□□□□ -1.31
SCARNA1-201ENST00000517138 TMEM191CA6NGB0 347 aa6.87□□□□□ -1.31
SCARNA1-201ENST00000517138 AGFG2O95081 481 aa6.87□□□□□ -1.31
SCARNA1-201ENST00000517138 GPANK1O95872 356 aa6.87□□□□□ -1.31
SCARNA1-201ENST00000517138 GCP02774 474 aa6.87□□□□□ -1.31
SCARNA1-201ENST00000517138 ALAS1P13196 640 aa6.87□□□□□ -1.31
SCARNA1-201ENST00000517138 KHDC1Q4VXA5 237 aaKnown RBP6.87□□□□□ -1.31
SCARNA1-201ENST00000517138 UTP14CQ5TAP6 766 aaKnown RBP6.87□□□□□ -1.31
SCARNA1-201ENST00000517138 HECTD2Q5U5R9 776 aa6.87□□□□□ -1.31
SCARNA1-201ENST00000517138 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.87□□□□□ -1.31
SCARNA1-201ENST00000517138 CATIPQ7Z7H3 387 aa6.87□□□□□ -1.31
SCARNA1-201ENST00000517138 LUC7L2Q9Y383 392 aaKnown RBP6.87□□□□□ -1.31
SCARNA1-201ENST00000517138 PIPSLA2A3N6 862 aa6.86□□□□□ -1.31
SCARNA1-201ENST00000517138 SUV39H1O43463 412 aa6.86□□□□□ -1.31
SCARNA1-201ENST00000517138 B3GALT2O43825 422 aa6.86□□□□□ -1.31
SCARNA1-201ENST00000517138 HAUS5O94927 633 aa6.86□□□□□ -1.31
SCARNA1-201ENST00000517138 HLA-DOAP06340 250 aa6.86□□□□□ -1.31
SCARNA1-201ENST00000517138 EGR2P11161 476 aaPredicted RBP6.86□□□□□ -1.31
SCARNA1-201ENST00000517138 ITGAMP11215 1152 aa6.86□□□□□ -1.31
SCARNA1-201ENST00000517138 RECQLP46063 649 aaPredicted RBP6.86□□□□□ -1.31
SCARNA1-201ENST00000517138 FOXI1Q12951 378 aa6.86□□□□□ -1.31
SCARNA1-201ENST00000517138 SNAPC2Q13487 334 aa6.86□□□□□ -1.31
SCARNA1-201ENST00000517138 CYP2A13Q16696 494 aa6.86□□□□□ -1.31
SCARNA1-201ENST00000517138 PABPC1LQ4VXU2 614 aaKnown RBP6.86□□□□□ -1.31
SCARNA1-201ENST00000517138 CPA6Q8N4T0 437 aa6.86□□□□□ -1.31
SCARNA1-201ENST00000517138 Q8NA96 180 aa6.86□□□□□ -1.31
SCARNA1-201ENST00000517138 REXO4Q9GZR2 422 aaKnown RBP6.86□□□□□ -1.31
SCARNA1-201ENST00000517138 SPEF1Q9Y4P9 236 aa6.86□□□□□ -1.31
SCARNA1-201ENST00000517138 EPN1Q9Y6I3 576 aaPredicted RBP6.86□□□□□ -1.31
SCARNA1-201ENST00000517138 KAT6AQ92794 2004 aa6.86□□□□□ -1.31
SCARNA1-201ENST00000517138 hCG_2014768A0A024R1R8 64 aa6.85□□□□□ -1.31
SCARNA1-201ENST00000517138 PPFIA4O75335 1185 aa6.85□□□□□ -1.31
SCARNA1-201ENST00000517138 SNUPNO95149 360 aaKnown RBP6.85□□□□□ -1.31
SCARNA1-201ENST00000517138 PDCP20941 246 aa6.85□□□□□ -1.31
SCARNA1-201ENST00000517138 IBSPP21815 317 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms