RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 ABHD14A-ACY1A0A1B0GW23 586 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 TLDC2A0PJX2 215 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 MYMKA6NI61 221 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 SOBPA7XYQ1 873 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 K7ERI5 159 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ENPP3O14638 875 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 AXIN1O15169 862 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 TBCAO75347 108 aaKnown RBP6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ZNF202O95125 648 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 IDEP14735 1019 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 SFPQP23246 707 aaKnown RBP eCLIP6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 GUCY2CP25092 1073 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 BMP8BP34820 402 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 KCNJ6P48051 423 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 GRIA4P48058 902 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PTENP60484 403 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PTSQ03393 145 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 DMP1Q13316 513 aaPredicted RBP6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 CAPSQ13938 189 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 DBN1Q16643 649 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 SPRED3Q2MJR0 410 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PLEKHG4Q58EX7 1191 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 FAM117BQ6P1L5 589 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 FBXL19Q6PCT2 694 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 TSHZ1Q6ZSZ6 1077 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 SRGAP1Q7Z6B7 1085 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 FAM228AQ86W67 206 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 CNNM3Q8NE01 707 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 BSNDQ8WZ55 320 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 HERVK_113Q902F9 699 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 APBB2Q92870 758 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 CCDC34Q96HJ3 373 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 RNPC3Q96LT9 517 aaKnown RBP6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 GBP4Q96PP9 640 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 REEP2Q9BRK0 252 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 KIFC3Q9BVG8 833 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 BLZF1Q9H2G9 400 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 CUEDC2Q9H467 287 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 IFT122Q9HBG6 1241 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 KMT5AQ9NQR1 393 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 DZANK1Q9NVP4 752 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 KCND2Q9NZV8 630 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 LARSQ9P2J5 1176 aaKnown RBP6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 USP25Q9UHP3 1055 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 HCN2Q9UL51 889 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 HPSEQ9Y251 543 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 EFR3BQ9Y2G0 817 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 SLC4A7Q9Y6M7 1214 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 EVPLQ92817 2033 aa6.38□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ALPK3Q96L96 1907 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 DENND3A2RUS2 1198 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 SLC35F4A4IF30 521 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 GRXCR1A8MXD5 290 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 SLC16A4O15374 487 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 BAIAP3O94812 1187 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ERLIN2O94905 339 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 AMHP03971 560 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 SLFN14P0C7P3 912 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PLS3P13797 630 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 CASP1P29466 404 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 NAMPTP43490 491 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 NPTX2P47972 431 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ASIC1P78348 528 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 FAM160A1Q05DH4 1040 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 POU5F1BQ06416 359 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 MAPK6Q16659 721 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 TCTN1Q2MV58 587 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 HERC4Q5GLZ8 1057 aaPredicted RBP6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 RAB44Q7Z6P3 723 aaPredicted RBP6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 RTN4RL1Q86UN2 441 aaPredicted RBP6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 FAM178BQ8IXR5 827 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 CCDC65Q8IXS2 484 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 GRAMD1CQ8IYS0 662 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 TDHQ8IZJ6 230 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 MYOCDQ8IZQ8 938 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PHC3Q8NDX5 983 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 VWCEQ96DN2 955 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PAGE5Q96GU1 130 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 SPACA7Q96KW9 195 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 NSUN5Q96P11 429 aaKnown RBP6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ADAM2Q99965 735 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 C7orf25Q9BPX7 421 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 FTHL17Q9BXU8 183 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 CEP44Q9C0F1 390 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 OSBPL2Q9H1P3 480 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 C2orf40Q9H1Z8 148 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 TNMDQ9H2S6 317 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 GOLPH3LQ9H4A5 285 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 MINDY3Q9H8M7 445 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 C17orf75Q9HAS0 396 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PARVGQ9HBI0 331 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ERVK-5Q9HDB9 667 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 CHST12Q9NRB3 414 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 NDFIP2Q9NV92 336 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PANK4Q9NVE7 773 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 PRMT7Q9NVM4 692 aaPredicted RBP6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 TBC1D7Q9P0N9 293 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 ODF2LQ9ULJ1 636 aa6.37□□□□□ -1.39
SCARNA6.1-201ENST00000516989 TLR6Q9Y2C9 796 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms