RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 CDY2AQ9Y6F7 541 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 LOC101059948A0A1B0GTJ6 334 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 PI4KAP2A4QPH2 592 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 MPHOSPH10O00566 681 aaKnown RBP3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 APAF1O14727 1248 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 CCL16O15467 120 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 TGM5O43548 720 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 NOBOXO60393 691 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 LDOC1O95751 146 aaPredicted RBP3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 F9P00740 461 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 ZNF853P0CG23 659 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 CEBPBP17676 345 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 WT1P19544 449 aaPredicted RBP3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 DNAJA1P31689 397 aaKnown RBP3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 SHMT1P34896 483 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 VIPR2P41587 438 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 GRM5P41594 1212 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 ZAP70P43403 619 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 BNC1Q01954 994 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 NEXNQ0ZGT2 675 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 PAK2Q13177 524 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 LY6KQ17RY6 165 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 PABPC1LQ4VXU2 614 aaKnown RBP3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 ZRANB3Q5FWF4 1079 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 TMEM196Q5HYL7 178 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 METTL24Q5JXM2 366 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 IGF2-ASQ6U949 168 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 IL27RAQ6UWB1 636 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 C16orf47Q6ZP98 133 aaPredicted RBP3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 WDR63Q8IWG1 891 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 ABI1Q8IZP0 508 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 PI4KAP1Q8N8J0 262 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 ACDQ96AP0 544 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 C14orf79Q96F83 325 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 SLC46A1Q96NT5 459 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 OXCT2Q9BYC2 517 aaPredicted RBP3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 MCCC2Q9HCC0 563 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 CCM2LQ9NUG4 571 aaPredicted RBP3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 RNF19AQ9NV58 838 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 SETD4Q9NVD3 440 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 IFT57Q9NWB7 429 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 TMEM161AQ9NX61 479 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 GTSE1Q9NYZ3 720 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 DNMT3BQ9UBC3 853 aaKnown RBP3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 ABCF2Q9UG63 623 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 TRIM35Q9UPQ4 493 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 SATB2Q9UPW6 733 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 USP20Q9Y2K6 914 aa3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 ZNF106Q9H2Y7 1883 aaKnown RBP3.75□□□□□ -1.81
SCARNA13-201ENST00000516672 TENM3Q9P273 2699 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 EFCAB7A8K855 629 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 CDRT15L2A8MXV6 281 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 C9IYK1 514 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 ZG16O60844 167 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 ZC3H11AO75152 810 aaKnown RBP eCLIP3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 PHACTR2O75167 634 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 LDHCP07864 332 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 ALAS1P13196 640 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 RASA1P20936 1047 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 MAOBP27338 520 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 GNAI1P63096 354 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 PUM3Q15397 648 aaKnown RBP3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 GRIK4Q16099 956 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 SLC5A9Q2M3M2 681 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 LRRC24Q50LG9 513 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 CCDC184Q52MB2 194 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 C3orf38Q5JPI3 329 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 SPTY2D1Q68D10 685 aaPredicted RBP3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 KSR2Q6VAB6 950 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 SLC24A5Q71RS6 500 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 CLEC10AQ8IUN9 316 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 MFSD6LQ8IWD5 586 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 WWC1Q8IX03 1113 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 YAF2Q8IY57 180 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 TRIML1Q8N9V2 468 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 NSUN7Q8NE18 718 aaKnown RBP3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 SMARCC2Q8TAQ2 1214 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 OSBP2Q969R2 916 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 ZNF668Q96K58 619 aaPredicted RBP3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 ASB16Q96NS5 453 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 MENTQ9BUN1 341 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 SLC29A3Q9BZD2 475 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 BTBD1Q9H0C5 482 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 EHD4Q9H223 541 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 PTPRHQ9HD43 1115 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 RGS18Q9NS28 235 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 RNF146Q9NTX7 359 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 CYP39A1Q9NYL5 469 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 RRN3Q9NYV6 651 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 COPG2Q9UBF2 871 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 APEX2Q9UBZ4 518 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 SERGEFQ9UGK8 458 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 ADAMTS1Q9UHI8 967 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 SERPINB13Q9UIV8 391 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 TP53TG5Q9Y2B4 290 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 FARP1Q9Y4F1 1045 aaPredicted RBP3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 FOCADQ5VW36 1801 aa3.74□□□□□ -1.81
SCARNA13-201ENST00000516672 ANK3Q12955 4377 aaKnown RBP3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 CHADO15335 359 aa3.73□□□□□ -1.81
SCARNA13-201ENST00000516672 HOXA2O43364 376 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms