RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 JTBO76095 146 aa0.07□□□□□ -2.4
RNU6-539P-201ENST00000516665 HOXA11P31270 313 aaPredicted RBP0.07□□□□□ -2.4
RNU6-539P-201ENST00000516665 HOXC12P31275 282 aa0.07□□□□□ -2.4
RNU6-539P-201ENST00000516665 HLCSP50747 726 aa0.07□□□□□ -2.4
RNU6-539P-201ENST00000516665 KRTAP10-10P60014 251 aa0.07□□□□□ -2.4
RNU6-539P-201ENST00000516665 DLK1P80370 383 aa0.07□□□□□ -2.4
RNU6-539P-201ENST00000516665 ATP2B2Q01814 1243 aa0.07□□□□□ -2.4
RNU6-539P-201ENST00000516665 PTPRRQ15256 657 aa0.07□□□□□ -2.4
RNU6-539P-201ENST00000516665 DGKDQ16760 1214 aa0.07□□□□□ -2.4
RNU6-539P-201ENST00000516665 TM4SF20Q53R12 229 aa0.07□□□□□ -2.4
RNU6-539P-201ENST00000516665 SERINC5Q86VE9 423 aa0.07□□□□□ -2.4
RNU6-539P-201ENST00000516665 KRTAP11-1Q8IUC1 163 aa0.07□□□□□ -2.4
RNU6-539P-201ENST00000516665 ZZZ3Q8IYH5 903 aa0.07□□□□□ -2.4
RNU6-539P-201ENST00000516665 FBXL14Q8N1E6 418 aa0.07□□□□□ -2.4
RNU6-539P-201ENST00000516665 CRACR2BQ8N4Y2 399 aaPredicted RBP0.07□□□□□ -2.4
RNU6-539P-201ENST00000516665 PNLDC1Q8NA58 520 aaKnown RBP0.07□□□□□ -2.4
RNU6-539P-201ENST00000516665 TMEM145Q8NBT3 493 aa0.07□□□□□ -2.4
RNU6-539P-201ENST00000516665 SSH1Q8WYL5 1049 aa0.07□□□□□ -2.4
RNU6-539P-201ENST00000516665 LPIN2Q92539 896 aa0.07□□□□□ -2.4
RNU6-539P-201ENST00000516665 TFAP2CQ92754 450 aa0.07□□□□□ -2.4
RNU6-539P-201ENST00000516665 TRIM55Q9BYV6 548 aa0.07□□□□□ -2.4
RNU6-539P-201ENST00000516665 TCF7L2Q9NQB0 619 aa0.07□□□□□ -2.4
RNU6-539P-201ENST00000516665 POLR3BQ9NW08 1133 aaPredicted RBP0.07□□□□□ -2.4
RNU6-539P-201ENST00000516665 USP25Q9UHP3 1055 aa0.07□□□□□ -2.4
RNU6-539P-201ENST00000516665 ATP23Q9Y6H3 246 aa0.07□□□□□ -2.4
RNU6-539P-201ENST00000516665 USP31Q70CQ4 1352 aa0.06□□□□□ -2.4
RNU6-539P-201ENST00000516665 ZMYM2Q9UBW7 1377 aa0.06□□□□□ -2.4
RNU6-539P-201ENST00000516665 ANKRD34BA5PLL1 514 aa0.06□□□□□ -2.4
RNU6-539P-201ENST00000516665 TBKBP1A7MCY6 615 aa0.06□□□□□ -2.4
RNU6-539P-201ENST00000516665 AMY2AP04746 511 aa0.06□□□□□ -2.4
RNU6-539P-201ENST00000516665 CTSHP09668 335 aa0.06□□□□□ -2.4
RNU6-539P-201ENST00000516665 SRGNP10124 158 aa0.06□□□□□ -2.4
RNU6-539P-201ENST00000516665 AMY2BP19961 511 aa0.06□□□□□ -2.4
RNU6-539P-201ENST00000516665 CDC25AP30304 524 aa0.06□□□□□ -2.4
RNU6-539P-201ENST00000516665 SLC7A5Q01650 507 aa0.06□□□□□ -2.4
RNU6-539P-201ENST00000516665 CCDC6Q16204 474 aa0.06□□□□□ -2.4
RNU6-539P-201ENST00000516665 FSTL4Q6MZW2 842 aa0.06□□□□□ -2.4
RNU6-539P-201ENST00000516665 CEP85Q6P2H3 762 aa0.06□□□□□ -2.4
RNU6-539P-201ENST00000516665 FAM198BQ6UWH4 519 aa0.06□□□□□ -2.4
RNU6-539P-201ENST00000516665 PRSS57Q6UWY2 283 aa0.06□□□□□ -2.4
RNU6-539P-201ENST00000516665 IQCF1Q8N6M8 205 aa0.06□□□□□ -2.4
RNU6-539P-201ENST00000516665 ARFGAP1Q8N6T3 406 aa0.06□□□□□ -2.4
RNU6-539P-201ENST00000516665 WDSUB1Q8N9V3 476 aa0.06□□□□□ -2.4
RNU6-539P-201ENST00000516665 DYDC2Q96IM9 177 aa0.06□□□□□ -2.4
RNU6-539P-201ENST00000516665 ASB2Q96Q27 587 aa0.06□□□□□ -2.4
RNU6-539P-201ENST00000516665 PRR34Q9NV39 138 aa0.06□□□□□ -2.4
RNU6-539P-201ENST00000516665 KBTBD4Q9NVX7 518 aa0.06□□□□□ -2.4
RNU6-539P-201ENST00000516665 DCTN4Q9UJW0 460 aa0.06□□□□□ -2.4
RNU6-539P-201ENST00000516665 FNDC1Q4ZHG4 1894 aaPredicted RBP0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 TRGV11A0A075B6L2 103 aa0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 SMTNL1A8MU46 457 aa0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 GOLGA6L22H0YM25 854 aa0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 NOP56O00567 594 aaKnown RBP0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 ERN1O75460 977 aaKnown RBP0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 URI1O94763 535 aaPredicted RBP0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 ALDH1A2O94788 518 aa0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 RASGRP1O95267 797 aa0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 CPP00450 1065 aa0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 EIF4A3P38919 411 aaKnown RBP0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 GFRA1P56159 465 aa0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 DSCR9P59020 149 aa0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 LMAN2Q12907 356 aa0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 SLC35F1Q5T1Q4 408 aa0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 ARHGAP36Q6ZRI8 547 aa0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 RAPH1Q70E73 1250 aa0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 GTSCR1Q86UQ5 136 aa0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 PTRH1Q86Y79 214 aaKnown RBP0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 COLGALT2Q8IYK4 626 aa0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 NLGN4XQ8N0W4 816 aa0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 SLC30A5Q8TAD4 765 aa0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 PPP1R14CQ8TAE6 165 aa0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 CALML6Q8TD86 181 aa0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 ZNF296Q8WUU4 475 aaPredicted RBP0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 CUL5Q93034 780 aa0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 GBP4Q96PP9 640 aa0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 FAM118BQ9BPY3 351 aa0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 COPRSQ9NQ92 184 aa0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 GPR27Q9NS67 375 aa0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 TMEM184CQ9NVA4 438 aa0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 HS3ST3B1Q9Y662 390 aa0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 ZMYM3Q14202 1370 aa0.05□□□□□ -2.4
RNU6-539P-201ENST00000516665 KCNK3O14649 394 aa0.04□□□□□ -2.4
RNU6-539P-201ENST00000516665 GPANK1O95872 356 aa0.04□□□□□ -2.4
RNU6-539P-201ENST00000516665 TTLL1O95922 423 aa0.04□□□□□ -2.4
RNU6-539P-201ENST00000516665 EBLN1P0CF75 366 aa0.04□□□□□ -2.4
RNU6-539P-201ENST00000516665 DUX4L4P0CJ87 422 aa0.04□□□□□ -2.4
RNU6-539P-201ENST00000516665 KCNJ6P48051 423 aa0.04□□□□□ -2.4
RNU6-539P-201ENST00000516665 KRTAP12-4P60329 112 aa0.04□□□□□ -2.4
RNU6-539P-201ENST00000516665 APOBRQ0VD83 1088 aa0.04□□□□□ -2.4
RNU6-539P-201ENST00000516665 PWP1Q13610 501 aa0.04□□□□□ -2.4
RNU6-539P-201ENST00000516665 FIGNQ5HY92 759 aa0.04□□□□□ -2.4
RNU6-539P-201ENST00000516665 PMS2CLQ68D20 193 aa0.04□□□□□ -2.4
RNU6-539P-201ENST00000516665 SUGP2Q8IX01 1082 aaKnown RBP eCLIP0.04□□□□□ -2.4
RNU6-539P-201ENST00000516665 FBXL16Q8N461 479 aa0.04□□□□□ -2.4
RNU6-539P-201ENST00000516665 HIPK4Q8NE63 616 aa0.04□□□□□ -2.4
RNU6-539P-201ENST00000516665 PIK3C3Q8NEB9 887 aa0.04□□□□□ -2.4
RNU6-539P-201ENST00000516665 TOR1AIP2Q8NFQ8 470 aa0.04□□□□□ -2.4
RNU6-539P-201ENST00000516665 MYCBPAPQ8TBZ2 947 aa0.04□□□□□ -2.4
RNU6-539P-201ENST00000516665 RITA1Q96K30 269 aa0.04□□□□□ -2.4
RNU6-539P-201ENST00000516665 ZNF347Q96SE7 839 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms