RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 RIN2Q8WYP3 895 aaPredicted RBP6.53□□□□□ -1.36
SCARNA18.1-201ENST00000516330 EDAQ92838 391 aa6.53□□□□□ -1.36
SCARNA18.1-201ENST00000516330 DNAJC19Q96DA6 116 aa6.53□□□□□ -1.36
SCARNA18.1-201ENST00000516330 CCDC34Q96HJ3 373 aa6.53□□□□□ -1.36
SCARNA18.1-201ENST00000516330 ZNF560Q96MR9 790 aa6.53□□□□□ -1.36
SCARNA18.1-201ENST00000516330 PRRX2Q99811 253 aa6.53□□□□□ -1.36
SCARNA18.1-201ENST00000516330 PAAF1Q9BRP4 392 aa6.53□□□□□ -1.36
SCARNA18.1-201ENST00000516330 STRA6Q9BX79 667 aa6.53□□□□□ -1.36
SCARNA18.1-201ENST00000516330 TRIM9Q9C026 710 aa6.53□□□□□ -1.36
SCARNA18.1-201ENST00000516330 MRPL44Q9H9J2 332 aaKnown RBP6.53□□□□□ -1.36
SCARNA18.1-201ENST00000516330 RPF1Q9H9Y2 349 aaKnown RBP6.53□□□□□ -1.36
SCARNA18.1-201ENST00000516330 WDR6Q9NNW5 1121 aaKnown RBP6.53□□□□□ -1.36
SCARNA18.1-201ENST00000516330 CD320Q9NPF0 282 aa6.53□□□□□ -1.36
SCARNA18.1-201ENST00000516330 KBTBD4Q9NVX7 518 aa6.53□□□□□ -1.36
SCARNA18.1-201ENST00000516330 FAM13BQ9NYF5 915 aa6.53□□□□□ -1.36
SCARNA18.1-201ENST00000516330 USP25Q9UHP3 1055 aa6.53□□□□□ -1.36
SCARNA18.1-201ENST00000516330 CPSF3Q9UKF6 684 aaKnown RBP6.53□□□□□ -1.36
SCARNA18.1-201ENST00000516330 NUB1Q9Y5A7 615 aa6.53□□□□□ -1.36
SCARNA18.1-201ENST00000516330 PCDHB13Q9Y5F0 798 aa6.53□□□□□ -1.36
SCARNA18.1-201ENST00000516330 ANK1P16157 1881 aa6.53□□□□□ -1.36
SCARNA18.1-201ENST00000516330 KMT2EQ8IZD2 1858 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 TRIP11Q15643 1979 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 SFI1A8K8P3 1242 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 F8W810 466 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 M0QZQ0 153 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 GCNT3O95395 438 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 C8AP07357 584 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 ODC1P11926 461 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 HARSP12081 509 aaKnown RBP6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 TYMPP19971 482 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 MCM4P33991 863 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 PNPLA4P41247 253 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 RBM10P98175 930 aaKnown RBP6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 YWHAHQ04917 246 aaPredicted RBP6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 SMARCB1Q12824 385 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 BECN1Q14457 450 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 ZBTB6Q15916 424 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 ENOX2Q16206 610 aaKnown RBP6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 SLC10A6Q3KNW5 377 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 SPATA1Q5VX52 437 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 FAM173BQ6P4H8 233 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 BRSK2Q8IWQ3 736 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 LEMD2Q8NC56 503 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 KREMEN2Q8NCW0 462 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 C3orf58Q8NDZ4 430 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 HASPINQ8TF76 798 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 KIF12Q96FN5 646 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 RPGRIP1Q96KN7 1286 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 ZMAT2Q96NC0 199 aaKnown RBP6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 ACCSQ96QU6 501 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 PLIN2Q99541 437 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 MSTO1Q9BUK6 570 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 PRKD2Q9BZL6 878 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 ZHX3Q9H4I2 956 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 GOLGA2P5Q9HBQ8 144 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 KIAA1586Q9HCI6 787 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 C11orf16Q9NQ32 467 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 AVENQ9NQS1 362 aaPredicted RBP6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 IGSF9Q9P2J2 1179 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 CGNQ9P2M7 1197 aaKnown RBP6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 EPS15L1Q9UBC2 864 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 HSFX1Q9UBD0 423 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 MUTYHQ9UIF7 546 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 AGO2Q9UKV8 859 aaKnown RBP6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 DSEQ9UL01 958 aa6.52□□□□□ -1.37
SCARNA18.1-201ENST00000516330 C5orf42Q9H799 3197 aa6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 NPHP3-ACAD11A0A0J9YXS1 232 aa6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 CCDC195A0A1B0GUA6 201 aa6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 MYMKA6NI61 221 aa6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 OR6C75A6NL08 312 aa6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 C2CD4DB7Z1M9 353 aa6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 CYP11A1P05108 521 aa6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 IDEP14735 1019 aa6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 ATF2P15336 505 aa6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 TKTP29401 623 aaKnown RBP6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 ME1P48163 572 aa6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 OSTNP61366 133 aa6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 ZXDAP98168 799 aa6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 ROR1Q01973 937 aa6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 CEBPZQ03701 1054 aaKnown RBP6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 SOX4Q06945 474 aaPredicted RBP6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 EHHADHQ08426 723 aa6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 PLD1Q13393 1074 aa6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 MRPL58Q14197 206 aaKnown RBP6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 MYBPC2Q14324 1141 aa6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 DHX8Q14562 1220 aaKnown RBP6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 TMEM132DQ14C87 1099 aa6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 SURF1Q15526 300 aa6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 BMT2Q1RMZ1 405 aa6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 SPECC1Q5M775 1068 aa6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 FAM26FQ5R3K3 315 aa6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 PPM1LQ5SGD2 360 aa6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 VARS2Q5ST30 1063 aaKnown RBP6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 AXDND1Q5T1B0 1012 aaPredicted RBP6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 RESP18Q5W5W9 173 aa6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 ADALQ6DHV7 355 aa6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 SLC39A4Q6P5W5 647 aa6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 SHC4Q6S5L8 630 aa6.51□□□□□ -1.37
SCARNA18.1-201ENST00000516330 TMC5Q6UXY8 1006 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms