RNA–Protein interactions for RNA: ENST00000516329.1

SNORA40.12-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 111 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.12-201ENST00000516329 USP14P54578 494 aa4.29□□□□□ -1.72
SNORA40.12-201ENST00000516329 ATP8B2P98198 1209 aa4.29□□□□□ -1.72
SNORA40.12-201ENST00000516329 COL10A1Q03692 680 aa4.29□□□□□ -1.72
SNORA40.12-201ENST00000516329 SMN1Q16637 294 aaKnown RBP4.29□□□□□ -1.72
SNORA40.12-201ENST00000516329 UAP1L1Q3KQV9 507 aa4.29□□□□□ -1.72
SNORA40.12-201ENST00000516329 B3GNTL1Q67FW5 361 aaPredicted RBP4.29□□□□□ -1.72
SNORA40.12-201ENST00000516329 TMEM132CQ8N3T6 1108 aa4.29□□□□□ -1.72
SNORA40.12-201ENST00000516329 SUPT20HQ8NEM7 779 aa4.29□□□□□ -1.72
SNORA40.12-201ENST00000516329 HDAC10Q969S8 669 aa4.29□□□□□ -1.72
SNORA40.12-201ENST00000516329 MARS2Q96GW9 593 aaKnown RBP4.29□□□□□ -1.72
SNORA40.12-201ENST00000516329 ALOXE3Q9BYJ1 711 aa4.29□□□□□ -1.72
SNORA40.12-201ENST00000516329 C11orf54Q9H0W9 315 aaPredicted RBP4.29□□□□□ -1.72
SNORA40.12-201ENST00000516329 GSTO2Q9H4Y5 243 aa4.29□□□□□ -1.72
SNORA40.12-201ENST00000516329 PCDH12Q9NPG4 1184 aa4.29□□□□□ -1.72
SNORA40.12-201ENST00000516329 RNF181Q9P0P0 153 aa4.29□□□□□ -1.72
SNORA40.12-201ENST00000516329 DKK2Q9UBU2 259 aa4.29□□□□□ -1.72
SNORA40.12-201ENST00000516329 TESQ9UGI8 421 aaKnown RBP4.29□□□□□ -1.72
SNORA40.12-201ENST00000516329 LIMCH1Q9UPQ0 1083 aa4.29□□□□□ -1.72
SNORA40.12-201ENST00000516329 NOX1Q9Y5S8 564 aa4.29□□□□□ -1.72
SNORA40.12-201ENST00000516329 ALG1L2C9J202 215 aa4.28□□□□□ -1.72
SNORA40.12-201ENST00000516329 OVOL3O00110 214 aa4.28□□□□□ -1.72
SNORA40.12-201ENST00000516329 HTRA2O43464 458 aaPredicted RBP4.28□□□□□ -1.72
SNORA40.12-201ENST00000516329 ERN1O75460 977 aaKnown RBP4.28□□□□□ -1.72
SNORA40.12-201ENST00000516329 SBK3P0C264 359 aa4.28□□□□□ -1.72
SNORA40.12-201ENST00000516329 CKBP12277 381 aa4.28□□□□□ -1.72
SNORA40.12-201ENST00000516329 BMP5P22003 454 aa4.28□□□□□ -1.72
SNORA40.12-201ENST00000516329 EDNRBP24530 442 aa4.28□□□□□ -1.72
SNORA40.12-201ENST00000516329 WASP42768 502 aa4.28□□□□□ -1.72
SNORA40.12-201ENST00000516329 CTXN1P60606 82 aa4.28□□□□□ -1.72
SNORA40.12-201ENST00000516329 NOMO3P69849 1222 aa4.28□□□□□ -1.72
SNORA40.12-201ENST00000516329 CXADRP78310 365 aa4.28□□□□□ -1.72
SNORA40.12-201ENST00000516329 CDC42EP1Q00587 391 aa4.28□□□□□ -1.72
SNORA40.12-201ENST00000516329 ODF1Q14990 250 aa4.28□□□□□ -1.72
SNORA40.12-201ENST00000516329 SPDYE7PQ495Y7 208 aa4.28□□□□□ -1.72
SNORA40.12-201ENST00000516329 NOMO2Q5JPE7 1267 aa4.28□□□□□ -1.72
SNORA40.12-201ENST00000516329 SLC44A3Q8N4M1 653 aa4.28□□□□□ -1.72
SNORA40.12-201ENST00000516329 FITM2Q8N6M3 262 aa4.28□□□□□ -1.72
SNORA40.12-201ENST00000516329 CAVIN3Q969G5 261 aa4.28□□□□□ -1.72
SNORA40.12-201ENST00000516329 ZG16BQ96DA0 208 aa4.28□□□□□ -1.72
SNORA40.12-201ENST00000516329 SERPINB13Q9UIV8 391 aa4.28□□□□□ -1.72
SNORA40.12-201ENST00000516329 PACSIN3Q9UKS6 424 aa4.28□□□□□ -1.72
SNORA40.12-201ENST00000516329 MTO1Q9Y2Z2 717 aaKnown RBP4.28□□□□□ -1.72
SNORA40.12-201ENST00000516329 IPPQ9Y573 584 aa4.28□□□□□ -1.72
SNORA40.12-201ENST00000516329 TNKSO95271 1327 aa4.27□□□□□ -1.73
SNORA40.12-201ENST00000516329 GRM6O15303 877 aa4.27□□□□□ -1.73
SNORA40.12-201ENST00000516329 HAUS5O94927 633 aa4.27□□□□□ -1.73
SNORA40.12-201ENST00000516329 FOSP01100 380 aaPredicted RBP4.27□□□□□ -1.73
SNORA40.12-201ENST00000516329 CD1AP06126 327 aa4.27□□□□□ -1.73
SNORA40.12-201ENST00000516329 FCER1AP12319 257 aa4.27□□□□□ -1.73
SNORA40.12-201ENST00000516329 SLC6A4P31645 630 aa4.27□□□□□ -1.73
SNORA40.12-201ENST00000516329 AVPR1BP47901 424 aa4.27□□□□□ -1.73
SNORA40.12-201ENST00000516329 ZNF280AP59817 542 aaPredicted RBP4.27□□□□□ -1.73
SNORA40.12-201ENST00000516329 ATP2B3Q16720 1220 aa4.27□□□□□ -1.73
SNORA40.12-201ENST00000516329 EFCAB2Q5VUJ9 269 aa4.27□□□□□ -1.73
SNORA40.12-201ENST00000516329 FOXR2Q6PJQ5 311 aa4.27□□□□□ -1.73
SNORA40.12-201ENST00000516329 GADL1Q6ZQY3 521 aa4.27□□□□□ -1.73
SNORA40.12-201ENST00000516329 GPR149Q86SP6 731 aa4.27□□□□□ -1.73
SNORA40.12-201ENST00000516329 IFI44Q8TCB0 444 aa4.27□□□□□ -1.73
SNORA40.12-201ENST00000516329 COA7Q96BR5 231 aa4.27□□□□□ -1.73
SNORA40.12-201ENST00000516329 ASPSCR1Q9BZE9 553 aa4.27□□□□□ -1.73
SNORA40.12-201ENST00000516329 HSFX1Q9UBD0 423 aa4.27□□□□□ -1.73
SNORA40.12-201ENST00000516329 WASHC2CQ9Y4E1 1318 aa4.26□□□□□ -1.73
SNORA40.12-201ENST00000516329 PIPSLA2A3N6 862 aa4.26□□□□□ -1.73
SNORA40.12-201ENST00000516329 RHOBTB3O94955 611 aa4.26□□□□□ -1.73
SNORA40.12-201ENST00000516329 HKR1P10072 659 aa4.26□□□□□ -1.73
SNORA40.12-201ENST00000516329 CCND1P24385 295 aa4.26□□□□□ -1.73
SNORA40.12-201ENST00000516329 PLA2G5P39877 138 aa4.26□□□□□ -1.73
SNORA40.12-201ENST00000516329 NANOS3P60323 173 aaKnown RBP4.26□□□□□ -1.73
SNORA40.12-201ENST00000516329 PURAQ00577 322 aaKnown RBP4.26□□□□□ -1.73
SNORA40.12-201ENST00000516329 SLFN5Q08AF3 891 aa4.26□□□□□ -1.73
SNORA40.12-201ENST00000516329 SCAPQ12770 1279 aa4.26□□□□□ -1.73
SNORA40.12-201ENST00000516329 GEN1Q17RS7 908 aa4.26□□□□□ -1.73
SNORA40.12-201ENST00000516329 DACT2Q5SW24 774 aa4.26□□□□□ -1.73
SNORA40.12-201ENST00000516329 ABHD17BQ5VST6 288 aa4.26□□□□□ -1.73
SNORA40.12-201ENST00000516329 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.26□□□□□ -1.73
SNORA40.12-201ENST00000516329 CLPTM1LQ96KA5 538 aa4.26□□□□□ -1.73
SNORA40.12-201ENST00000516329 Q96MF0 132 aa4.26□□□□□ -1.73
SNORA40.12-201ENST00000516329 TLR10Q9BXR5 811 aa4.26□□□□□ -1.73
SNORA40.12-201ENST00000516329 PACSIN1Q9BY11 444 aa4.26□□□□□ -1.73
SNORA40.12-201ENST00000516329 TOR3AQ9H497 397 aa4.26□□□□□ -1.73
SNORA40.12-201ENST00000516329 SYBUQ9NX95 663 aa4.26□□□□□ -1.73
SNORA40.12-201ENST00000516329 FAM30AQ9NZY2 134 aa4.26□□□□□ -1.73
SNORA40.12-201ENST00000516329 KCNE5Q9UJ90 142 aa4.26□□□□□ -1.73
SNORA40.12-201ENST00000516329 CDYLQ9Y232 598 aa4.26□□□□□ -1.73
SNORA40.12-201ENST00000516329 SGTAO43765 313 aa4.25□□□□□ -1.73
SNORA40.12-201ENST00000516329 AGFG2O95081 481 aa4.25□□□□□ -1.73
SNORA40.12-201ENST00000516329 ZFPL1O95159 310 aa4.25□□□□□ -1.73
SNORA40.12-201ENST00000516329 NUDT3O95989 172 aa4.25□□□□□ -1.73
SNORA40.12-201ENST00000516329 LMNAP02545 664 aaKnown RBP4.25□□□□□ -1.73
SNORA40.12-201ENST00000516329 EGR2P11161 476 aaPredicted RBP4.25□□□□□ -1.73
SNORA40.12-201ENST00000516329 MTHFD1P11586 935 aaKnown RBP4.25□□□□□ -1.73
SNORA40.12-201ENST00000516329 FDXRP22570 491 aa4.25□□□□□ -1.73
SNORA40.12-201ENST00000516329 SEC24CP53992 1094 aa4.25□□□□□ -1.73
SNORA40.12-201ENST00000516329 KRT85P78386 507 aa4.25□□□□□ -1.73
SNORA40.12-201ENST00000516329 TAP1Q03518 808 aa4.25□□□□□ -1.73
SNORA40.12-201ENST00000516329 TLE1Q04724 770 aa4.25□□□□□ -1.73
SNORA40.12-201ENST00000516329 CYP2A13Q16696 494 aa4.25□□□□□ -1.73
SNORA40.12-201ENST00000516329 PTPROQ16827 1216 aa4.25□□□□□ -1.73
SNORA40.12-201ENST00000516329 PABPC1LQ4VXU2 614 aaKnown RBP4.25□□□□□ -1.73
SNORA40.12-201ENST00000516329 ARMC6Q6NXE6 501 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms