RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 GPR62Q9BZJ7 368 aa28.16■■■□□ 2.1
DDR1-279ENST00000515529 PDXKO00764 312 aa28.15■■■□□ 2.1
DDR1-279ENST00000515529 C2CD2LO14523 706 aa28.15■■■□□ 2.1
DDR1-279ENST00000515529 NT5DC4Q86YG4 428 aa28.15■■■□□ 2.1
DDR1-279ENST00000515529 C12orf56Q8IXR9 622 aa28.15■■■□□ 2.1
DDR1-279ENST00000515529 GUF1Q8N442 669 aaKnown RBP28.15■■■□□ 2.1
DDR1-279ENST00000515529 EMILIN2Q9BXX0 1053 aa28.15■■■□□ 2.1
DDR1-279ENST00000515529 CLDND1Q9NY35 253 aa28.15■■■□□ 2.1
DDR1-279ENST00000515529 THEGQ9P2T0 379 aa28.15■■■□□ 2.1
DDR1-279ENST00000515529 PER2O15055 1255 aa28.14■■■□□ 2.1
DDR1-279ENST00000515529 EXOC3O60645 756 aa28.14■■■□□ 2.1
DDR1-279ENST00000515529 SRGAP2BP0DMP2 458 aa28.14■■■□□ 2.1
DDR1-279ENST00000515529 SURF1Q15526 300 aa28.14■■■□□ 2.1
DDR1-279ENST00000515529 PTPN14Q15678 1187 aa28.14■■■□□ 2.1
DDR1-279ENST00000515529 ZBTB6Q15916 424 aa28.14■■■□□ 2.1
DDR1-279ENST00000515529 ZNF658Q5TYW1 1059 aaPredicted RBP28.14■■■□□ 2.1
DDR1-279ENST00000515529 FAM171A1Q5VUB5 890 aa28.14■■■□□ 2.1
DDR1-279ENST00000515529 SPATA1Q5VX52 437 aa28.14■■■□□ 2.1
DDR1-279ENST00000515529 TAS1R1Q7RTX1 841 aa28.14■■■□□ 2.1
DDR1-279ENST00000515529 CEP57Q86XR8 500 aa28.14■■■□□ 2.1
DDR1-279ENST00000515529 CBWD2Q8IUF1 395 aa28.14■■■□□ 2.1
DDR1-279ENST00000515529 RDH13Q8NBN7 331 aa28.14■■■□□ 2.1
DDR1-279ENST00000515529 CACTINQ8WUQ7 758 aaKnown RBP28.14■■■□□ 2.1
DDR1-279ENST00000515529 IRAK3Q9Y616 596 aa28.14■■■□□ 2.1
DDR1-279ENST00000515529 LRPAP1P30533 357 aa28.13■■■□□ 2.09
DDR1-279ENST00000515529 MCM4P33991 863 aa28.13■■■□□ 2.09
DDR1-279ENST00000515529 TFAMQ00059 246 aaKnown RBP28.13■■■□□ 2.09
DDR1-279ENST00000515529 SNRNP35Q16560 246 aaKnown RBP28.13■■■□□ 2.09
DDR1-279ENST00000515529 DUSP6Q16828 381 aa28.13■■■□□ 2.09
DDR1-279ENST00000515529 SMYD4Q8IYR2 804 aaPredicted RBP28.13■■■□□ 2.09
DDR1-279ENST00000515529 RNF168Q8IYW5 571 aaPredicted RBP28.13■■■□□ 2.09
DDR1-279ENST00000515529 EFHBQ8N7U6 833 aa28.13■■■□□ 2.09
DDR1-279ENST00000515529 SPATA20Q8TB22 786 aa28.13■■■□□ 2.09
DDR1-279ENST00000515529 PABPC5Q96DU9 382 aaKnown RBP28.13■■■□□ 2.09
DDR1-279ENST00000515529 TTPALQ9BTX7 342 aa28.13■■■□□ 2.09
DDR1-279ENST00000515529 KCTD10Q9H3F6 313 aa28.13■■■□□ 2.09
DDR1-279ENST00000515529 PRDM6Q9NQX0 595 aa28.13■■■□□ 2.09
DDR1-279ENST00000515529 ATG2AQ2TAZ0 1938 aa28.12■■■□□ 2.09
DDR1-279ENST00000515529 GTF2F1P35269 517 aaKnown RBP eCLIP28.12■■■□□ 2.098e-7■■■■□ 24.7
DDR1-279ENST00000515529 GUCY2FP51841 1108 aa28.12■■■□□ 2.09
DDR1-279ENST00000515529 DSG1Q02413 1049 aa28.12■■■□□ 2.09
DDR1-279ENST00000515529 CREMQ03060 361 aa28.12■■■□□ 2.09
DDR1-279ENST00000515529 STIM1Q13586 685 aa28.12■■■□□ 2.09
DDR1-279ENST00000515529 RIN2Q8WYP3 895 aaPredicted RBP28.12■■■□□ 2.09
DDR1-279ENST00000515529 B3GALT6Q96L58 329 aa28.12■■■□□ 2.09
DDR1-279ENST00000515529 FBXL18Q96ME1 805 aa28.12■■■□□ 2.09
DDR1-279ENST00000515529 UBE2ZQ9H832 354 aaPredicted RBP28.12■■■□□ 2.09
DDR1-279ENST00000515529 PDE11AQ9HCR9 933 aa28.12■■■□□ 2.09
DDR1-279ENST00000515529 PDCD11Q14690 1871 aaKnown RBP28.12■■■□□ 2.09
DDR1-279ENST00000515529 EFEMP2O95967 443 aa28.11■■■□□ 2.09
DDR1-279ENST00000515529 NR3C1P04150 777 aa28.11■■■□□ 2.09
DDR1-279ENST00000515529 NDUFV1P49821 464 aa28.11■■■□□ 2.09
DDR1-279ENST00000515529 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.11■■■□□ 2.09
DDR1-279ENST00000515529 C3orf58Q8NDZ4 430 aa28.11■■■□□ 2.09
DDR1-279ENST00000515529 FNBP1Q96RU3 617 aa28.11■■■□□ 2.09
DDR1-279ENST00000515529 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP28.11■■■□□ 2.09
DDR1-279ENST00000515529 CHST7Q9NS84 486 aa28.11■■■□□ 2.09
DDR1-279ENST00000515529 DPP3Q9NY33 737 aa28.11■■■□□ 2.09
DDR1-279ENST00000515529 TMEM191BP0C7N4 346 aa28.1■■■□□ 2.09
DDR1-279ENST00000515529 KLRC2P26717 231 aa28.1■■■□□ 2.09
DDR1-279ENST00000515529 BRCC3P46736 316 aa28.1■■■□□ 2.09
DDR1-279ENST00000515529 CAMK4Q16566 473 aa28.1■■■□□ 2.09
DDR1-279ENST00000515529 AAK1Q2M2I8 961 aa28.1■■■□□ 2.09
DDR1-279ENST00000515529 KIAA0319Q5VV43 1072 aa28.1■■■□□ 2.09
DDR1-279ENST00000515529 PDXDC1Q6P996 788 aa28.1■■■□□ 2.09
DDR1-279ENST00000515529 EFCAB13Q8IY85 973 aa28.1■■■□□ 2.09
DDR1-279ENST00000515529 LMBRD1Q9NUN5 540 aa28.1■■■□□ 2.09
DDR1-279ENST00000515529 MAN1B1Q9UKM7 699 aa28.1■■■□□ 2.09
DDR1-279ENST00000515529 TRAF3IP3Q9Y228 551 aa28.1■■■□□ 2.09
DDR1-279ENST00000515529 FRMD4BQ9Y2L6 1034 aa28.1■■■□□ 2.09
DDR1-279ENST00000515529 R3HCC1Q9Y3T6 440 aaKnown RBP28.1■■■□□ 2.09
DDR1-279ENST00000515529 CLASP2O75122 1294 aaKnown RBP28.09■■■□□ 2.09
DDR1-279ENST00000515529 KCNA5P22460 613 aa28.09■■■□□ 2.09
DDR1-279ENST00000515529 RPL13P26373 211 aaKnown RBP28.09■■■□□ 2.09
DDR1-279ENST00000515529 ADAM15Q13444 863 aa28.09■■■□□ 2.09
DDR1-279ENST00000515529 MYBPC2Q14324 1141 aa28.09■■■□□ 2.09
DDR1-279ENST00000515529 ISM2Q6H9L7 571 aa28.09■■■□□ 2.09
DDR1-279ENST00000515529 LLGL2Q6P1M3 1020 aa28.09■■■□□ 2.09
DDR1-279ENST00000515529 PPFIBP1Q86W92 1011 aa28.09■■■□□ 2.09
DDR1-279ENST00000515529 SLC9A9Q8IVB4 645 aa28.09■■■□□ 2.09
DDR1-279ENST00000515529 GPR65Q8IYL9 337 aa28.09■■■□□ 2.09
DDR1-279ENST00000515529 ANKRD36BP1Q96IX9 119 aa28.09■■■□□ 2.09
DDR1-279ENST00000515529 TSG101Q99816 390 aa28.09■■■□□ 2.09
DDR1-279ENST00000515529 I3L4J1 428 aa28.08■■■□□ 2.09
DDR1-279ENST00000515529 TNNC2P02585 160 aa28.08■■■□□ 2.09
DDR1-279ENST00000515529 ADH1AP07327 375 aa28.08■■■□□ 2.09
DDR1-279ENST00000515529 PRCPP42785 496 aa28.08■■■□□ 2.09
DDR1-279ENST00000515529 CYP24A1Q07973 514 aa28.08■■■□□ 2.09
DDR1-279ENST00000515529 RTP2Q5QGT7 225 aa28.08■■■□□ 2.09
DDR1-279ENST00000515529 C9orf57Q5W0N0 161 aa28.08■■■□□ 2.09
DDR1-279ENST00000515529 CEP135Q66GS9 1140 aa28.08■■■□□ 2.09
DDR1-279ENST00000515529 CD300LGQ6UXG3 332 aa28.08■■■□□ 2.09
DDR1-279ENST00000515529 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.08■■■□□ 2.09
DDR1-279ENST00000515529 KLHL5Q96PQ7 755 aa28.08■■■□□ 2.09
DDR1-279ENST00000515529 BIN1O00499 593 aa28.07■■■□□ 2.08
DDR1-279ENST00000515529 LINC01565O15544 149 aa28.07■■■□□ 2.08
DDR1-279ENST00000515529 CNPP09543 421 aaKnown RBP28.07■■■□□ 2.08
DDR1-279ENST00000515529 DLATP10515 647 aaKnown RBP28.07■■■□□ 2.08
DDR1-279ENST00000515529 PAX3P23760 479 aa28.07■■■□□ 2.08
DDR1-279ENST00000515529 NR2F2P24468 414 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms