RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 ENOX2Q16206 610 aaKnown RBP13.91□□□□□ -0.18
CLCN3-210ENST00000515420 SEZ6Q53EL9 994 aa13.91□□□□□ -0.18
CLCN3-210ENST00000515420 FAM171A1Q5VUB5 890 aa13.91□□□□□ -0.18
CLCN3-210ENST00000515420 CES5AQ6NT32 575 aa13.91□□□□□ -0.18
CLCN3-210ENST00000515420 UNC13DQ70J99 1090 aa13.91□□□□□ -0.18
CLCN3-210ENST00000515420 CEP57L1Q8IYX8 460 aa13.91□□□□□ -0.18
CLCN3-210ENST00000515420 GJD3Q8N144 294 aa13.91□□□□□ -0.18
CLCN3-210ENST00000515420 HASPINQ8TF76 798 aa13.91□□□□□ -0.18
CLCN3-210ENST00000515420 RIN2Q8WYP3 895 aaPredicted RBP13.91□□□□□ -0.18
CLCN3-210ENST00000515420 RABGGTAQ92696 567 aa13.91□□□□□ -0.18
CLCN3-210ENST00000515420 STAMQ92783 540 aa13.91□□□□□ -0.18
CLCN3-210ENST00000515420 FBXL18Q96ME1 805 aa13.91□□□□□ -0.18
CLCN3-210ENST00000515420 NECTIN4Q96NY8 510 aa13.91□□□□□ -0.18
CLCN3-210ENST00000515420 PHF7Q9BWX1 381 aaPredicted RBP13.91□□□□□ -0.18
CLCN3-210ENST00000515420 RHOBTB2Q9BYZ6 727 aa13.91□□□□□ -0.18
CLCN3-210ENST00000515420 PLEKHA4Q9H4M7 779 aa13.91□□□□□ -0.18
CLCN3-210ENST00000515420 SFXN1Q9H9B4 322 aa13.91□□□□□ -0.18
CLCN3-210ENST00000515420 GOLGA2P5Q9HBQ8 144 aa13.91□□□□□ -0.18
CLCN3-210ENST00000515420 TBC1D7Q9P0N9 293 aa13.91□□□□□ -0.18
CLCN3-210ENST00000515420 AGO2Q9UKV8 859 aaKnown RBP13.91□□□□□ -0.18
CLCN3-210ENST00000515420 HPSEQ9Y251 543 aa13.91□□□□□ -0.18
CLCN3-210ENST00000515420 UBE4BO95155 1302 aa13.9□□□□□ -0.18
CLCN3-210ENST00000515420 A0A1W2PQ27 194 aa13.9□□□□□ -0.18
CLCN3-210ENST00000515420 A0A1W2PQ64 194 aa13.9□□□□□ -0.18
CLCN3-210ENST00000515420 A0A1W2PQD8 194 aa13.9□□□□□ -0.18
CLCN3-210ENST00000515420 SYN3O14994 580 aa13.9□□□□□ -0.18
CLCN3-210ENST00000515420 KIAA0391O15091 583 aaKnown RBP13.9□□□□□ -0.18
CLCN3-210ENST00000515420 LDHAP00338 332 aaKnown RBP13.9□□□□□ -0.18
CLCN3-210ENST00000515420 MYBP10242 640 aa13.9□□□□□ -0.18
CLCN3-210ENST00000515420 PFKFB1P16118 471 aa13.9□□□□□ -0.18
CLCN3-210ENST00000515420 GARTP22102 1010 aa13.9□□□□□ -0.18
CLCN3-210ENST00000515420 PAX3P23760 479 aa13.9□□□□□ -0.18
CLCN3-210ENST00000515420 ADSSP30520 456 aa13.9□□□□□ -0.18
CLCN3-210ENST00000515420 MTHFRP42898 656 aa13.9□□□□□ -0.18
CLCN3-210ENST00000515420 CASP5P51878 434 aa13.9□□□□□ -0.18
CLCN3-210ENST00000515420 PSMD5Q16401 504 aa13.9□□□□□ -0.18
CLCN3-210ENST00000515420 RTP2Q5QGT7 225 aa13.9□□□□□ -0.18
CLCN3-210ENST00000515420 CD300LGQ6UXG3 332 aa13.9□□□□□ -0.18
CLCN3-210ENST00000515420 CYP26C1Q6V0L0 522 aa13.9□□□□□ -0.18
CLCN3-210ENST00000515420 C15orf39Q6ZRI6 1047 aa13.9□□□□□ -0.18
CLCN3-210ENST00000515420 C3orf58Q8NDZ4 430 aa13.9□□□□□ -0.18
CLCN3-210ENST00000515420 CMASQ8NFW8 434 aaPredicted RBP13.9□□□□□ -0.18
CLCN3-210ENST00000515420 LNX1Q8TBB1 728 aaPredicted RBP13.9□□□□□ -0.18
CLCN3-210ENST00000515420 POMGNT1Q8WZA1 660 aa13.9□□□□□ -0.18
CLCN3-210ENST00000515420 KIF12Q96FN5 646 aa13.9□□□□□ -0.18
CLCN3-210ENST00000515420 RIPOR3Q96MK2 946 aa13.9□□□□□ -0.18
CLCN3-210ENST00000515420 C2CD2Q9Y426 696 aa13.9□□□□□ -0.18
CLCN3-210ENST00000515420 DENND4AQ7Z401 1863 aa13.9□□□□□ -0.18
CLCN3-210ENST00000515420 LACTBL1A8MY62 500 aa13.89□□□□□ -0.19
CLCN3-210ENST00000515420 ACTN4O43707 911 aaKnown RBP13.89□□□□□ -0.19
CLCN3-210ENST00000515420 IL18RAPO95256 599 aa13.89□□□□□ -0.19
CLCN3-210ENST00000515420 SSTR3P32745 418 aaPredicted RBP13.89□□□□□ -0.19
CLCN3-210ENST00000515420 KCNA1Q09470 495 aa13.89□□□□□ -0.19
CLCN3-210ENST00000515420 FAM26FQ5R3K3 315 aa13.89□□□□□ -0.19
CLCN3-210ENST00000515420 ZBTB41Q5SVQ8 909 aa13.89□□□□□ -0.19
CLCN3-210ENST00000515420 ANKS3Q6ZW76 656 aa13.89□□□□□ -0.19
CLCN3-210ENST00000515420 EPM2AIP1Q7L775 607 aaPredicted RBP13.89□□□□□ -0.19
CLCN3-210ENST00000515420 CEP57Q86XR8 500 aa13.89□□□□□ -0.19
CLCN3-210ENST00000515420 NT5DC4Q86YG4 428 aa13.89□□□□□ -0.19
CLCN3-210ENST00000515420 SYCP3Q8IZU3 236 aa13.89□□□□□ -0.19
CLCN3-210ENST00000515420 C18orf25Q96B23 403 aaPredicted RBP13.89□□□□□ -0.19
CLCN3-210ENST00000515420 SUSD3Q96L08 255 aa13.89□□□□□ -0.19
CLCN3-210ENST00000515420 B3GALT6Q96L58 329 aa13.89□□□□□ -0.19
CLCN3-210ENST00000515420 FGFBP2Q9BYJ0 223 aa13.89□□□□□ -0.19
CLCN3-210ENST00000515420 MTRRQ9UBK8 725 aa13.89□□□□□ -0.19
CLCN3-210ENST00000515420 NUB1Q9Y5A7 615 aa13.89□□□□□ -0.19
CLCN3-210ENST00000515420 BACE2Q9Y5Z0 518 aa13.89□□□□□ -0.19
CLCN3-210ENST00000515420 C2orf16Q68DN1 1984 aa13.89□□□□□ -0.19
CLCN3-210ENST00000515420 LOC730098B7Z3J9 87 aa13.88□□□□□ -0.19
CLCN3-210ENST00000515420 TISP43B9A030 160 aa13.88□□□□□ -0.19
CLCN3-210ENST00000515420 SNRPFP62306 86 aaKnown RBP13.88□□□□□ -0.19
CLCN3-210ENST00000515420 SPATA1Q5VX52 437 aa13.88□□□□□ -0.19
CLCN3-210ENST00000515420 LILRA6Q6PI73 481 aa13.88□□□□□ -0.19
CLCN3-210ENST00000515420 PRSS55Q6UWB4 352 aaPredicted RBP13.88□□□□□ -0.19
CLCN3-210ENST00000515420 RTL10Q7L3V2 364 aa13.88□□□□□ -0.19
CLCN3-210ENST00000515420 BEST2Q8NFU1 509 aa13.88□□□□□ -0.19
CLCN3-210ENST00000515420 CLSTN3Q9BQT9 956 aa13.88□□□□□ -0.19
CLCN3-210ENST00000515420 CD320Q9NPF0 282 aa13.88□□□□□ -0.19
CLCN3-210ENST00000515420 MAN1C1Q9NR34 630 aa13.88□□□□□ -0.19
CLCN3-210ENST00000515420 ZDHHC7Q9NXF8 308 aa13.88□□□□□ -0.19
CLCN3-210ENST00000515420 TUBGCP4Q9UGJ1 667 aa13.88□□□□□ -0.19
CLCN3-210ENST00000515420 A0A1B0GVL5 298 aa13.87□□□□□ -0.19
CLCN3-210ENST00000515420 SPDYE4A6NLX3 237 aa13.87□□□□□ -0.19
CLCN3-210ENST00000515420 M0QZQ0 153 aa13.87□□□□□ -0.19
CLCN3-210ENST00000515420 TGM5O43548 720 aa13.87□□□□□ -0.19
CLCN3-210ENST00000515420 PRPF6O94906 941 aaKnown RBP13.87□□□□□ -0.19
CLCN3-210ENST00000515420 TKTP29401 623 aaKnown RBP13.87□□□□□ -0.19
CLCN3-210ENST00000515420 SYKP43405 635 aa13.87□□□□□ -0.19
CLCN3-210ENST00000515420 AFMP43652 599 aa13.87□□□□□ -0.19
CLCN3-210ENST00000515420 BRCC3P46736 316 aa13.87□□□□□ -0.19
CLCN3-210ENST00000515420 AARSP49588 968 aaKnown RBP eCLIP13.87□□□□□ -0.19
CLCN3-210ENST00000515420 ACOT2P49753 483 aa13.87□□□□□ -0.19
CLCN3-210ENST00000515420 TMEM132DQ14C87 1099 aa13.87□□□□□ -0.19
CLCN3-210ENST00000515420 ATAT1Q5SQI0 421 aa13.87□□□□□ -0.19
CLCN3-210ENST00000515420 RARS2Q5T160 578 aaKnown RBP13.87□□□□□ -0.19
CLCN3-210ENST00000515420 JADE1Q6IE81 842 aa13.87□□□□□ -0.19
CLCN3-210ENST00000515420 CRELD2Q6UXH1 353 aaPredicted RBP13.87□□□□□ -0.19
CLCN3-210ENST00000515420 GPR149Q86SP6 731 aa13.87□□□□□ -0.19
CLCN3-210ENST00000515420 BRSK2Q8IWQ3 736 aa13.87□□□□□ -0.19
CLCN3-210ENST00000515420 APPL2Q8NEU8 664 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms