RNA–Protein interactions for RNA: ENST00000514901.5

NUP54-216, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-216ENST00000514901 DHTKD1Q96HY7 919 aaPredicted RBP15.46■□□□□ 0.07
NUP54-216ENST00000514901 CDCA3Q99618 268 aaPredicted RBP15.46■□□□□ 0.07
NUP54-216ENST00000514901 TSG101Q99816 390 aa15.46■□□□□ 0.07
NUP54-216ENST00000514901 PAAF1Q9BRP4 392 aa15.46■□□□□ 0.07
NUP54-216ENST00000514901 HERC2P3Q9BVR0 1158 aa15.46■□□□□ 0.07
NUP54-216ENST00000514901 ZBP1Q9H171 429 aa15.46■□□□□ 0.07
NUP54-216ENST00000514901 NUP62CLQ9H1M0 184 aa15.46■□□□□ 0.07
NUP54-216ENST00000514901 FRMD4BQ9Y2L6 1034 aa15.46■□□□□ 0.07
NUP54-216ENST00000514901 IRAK3Q9Y616 596 aa15.46■□□□□ 0.07
NUP54-216ENST00000514901 COL4A4P53420 1690 aaPredicted RBP15.45■□□□□ 0.06
NUP54-216ENST00000514901 PSMA7O14818 248 aa15.45■□□□□ 0.06
NUP54-216ENST00000514901 MAPK13O15264 365 aa15.45■□□□□ 0.06
NUP54-216ENST00000514901 KIF4AO95239 1232 aa15.45■□□□□ 0.06
NUP54-216ENST00000514901 NFICP08651 508 aa15.45■□□□□ 0.06
NUP54-216ENST00000514901 IRS1P35568 1242 aa15.45■□□□□ 0.06
NUP54-216ENST00000514901 CYP24A1Q07973 514 aa15.45■□□□□ 0.06
NUP54-216ENST00000514901 KIAA1841Q6NSI8 718 aa15.45■□□□□ 0.06
NUP54-216ENST00000514901 RDH13Q8NBN7 331 aa15.45■□□□□ 0.06
NUP54-216ENST00000514901 RABGGTAQ92696 567 aa15.45■□□□□ 0.06
NUP54-216ENST00000514901 MFSD14AQ96MC6 490 aa15.45■□□□□ 0.06
NUP54-216ENST00000514901 FNBP1Q96RU3 617 aa15.45■□□□□ 0.06
NUP54-216ENST00000514901 VN1R3Q9BXE9 311 aa15.45■□□□□ 0.06
NUP54-216ENST00000514901 GOLGA2P5Q9HBQ8 144 aa15.45■□□□□ 0.06
NUP54-216ENST00000514901 MRPL17Q9NRX2 175 aaKnown RBP15.45■□□□□ 0.06
NUP54-216ENST00000514901 CHST7Q9NS84 486 aa15.45■□□□□ 0.06
NUP54-216ENST00000514901 DPP3Q9NY33 737 aa15.45■□□□□ 0.06
NUP54-216ENST00000514901 CACNG4Q9UBN1 327 aa15.45■□□□□ 0.06
NUP54-216ENST00000514901 TUBGCP4Q9UGJ1 667 aa15.45■□□□□ 0.06
NUP54-216ENST00000514901 NUB1Q9Y5A7 615 aa15.45■□□□□ 0.06
NUP54-216ENST00000514901 PDCD11Q14690 1871 aaKnown RBP15.45■□□□□ 0.06
NUP54-216ENST00000514901 PLXNA4Q9HCM2 1894 aa15.45■□□□□ 0.06
NUP54-216ENST00000514901 C2orf71A6NGG8 1288 aa15.44■□□□□ 0.06
NUP54-216ENST00000514901 TULP1O00294 542 aaPredicted RBP15.44■□□□□ 0.06
NUP54-216ENST00000514901 URODP06132 367 aa15.44■□□□□ 0.06
NUP54-216ENST00000514901 NR2F2P24468 414 aa15.44■□□□□ 0.06
NUP54-216ENST00000514901 MCM4P33991 863 aa15.44■□□□□ 0.06
NUP54-216ENST00000514901 TFAMQ00059 246 aaKnown RBP15.44■□□□□ 0.06
NUP54-216ENST00000514901 DSG1Q02413 1049 aa15.44■□□□□ 0.06
NUP54-216ENST00000514901 LRRC63Q05C16 580 aa15.44■□□□□ 0.06
NUP54-216ENST00000514901 ADAM9Q13443 819 aa15.44■□□□□ 0.06
NUP54-216ENST00000514901 PSMD6Q15008 389 aa15.44■□□□□ 0.06
NUP54-216ENST00000514901 CCDC85BQ15834 202 aaPredicted RBP15.44■□□□□ 0.06
NUP54-216ENST00000514901 DUOXA2Q1HG44 320 aa15.44■□□□□ 0.06
NUP54-216ENST00000514901 ZCWPW2Q504Y3 356 aa15.44■□□□□ 0.06
NUP54-216ENST00000514901 TCEAL5Q5H9L2 206 aa15.44■□□□□ 0.06
NUP54-216ENST00000514901 PLPP4Q5VZY2 271 aa15.44■□□□□ 0.06
NUP54-216ENST00000514901 ISM2Q6H9L7 571 aa15.44■□□□□ 0.06
NUP54-216ENST00000514901 PDXDC1Q6P996 788 aa15.44■□□□□ 0.06
NUP54-216ENST00000514901 FOXR2Q6PJQ5 311 aa15.44■□□□□ 0.06
NUP54-216ENST00000514901 USP37Q86T82 979 aa15.44■□□□□ 0.06
NUP54-216ENST00000514901 EFCAB13Q8IY85 973 aa15.44■□□□□ 0.06
NUP54-216ENST00000514901 GPT2Q8TD30 523 aa15.44■□□□□ 0.06
NUP54-216ENST00000514901 ANKRD36BP1Q96IX9 119 aa15.44■□□□□ 0.06
NUP54-216ENST00000514901 GPR62Q9BZJ7 368 aa15.44■□□□□ 0.06
NUP54-216ENST00000514901 TLE6Q9H808 572 aa15.44■□□□□ 0.06
NUP54-216ENST00000514901 PDE11AQ9HCR9 933 aa15.44■□□□□ 0.06
NUP54-216ENST00000514901 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.44■□□□□ 0.06
NUP54-216ENST00000514901 BRWD1Q9NSI6 2320 aa15.44■□□□□ 0.06
NUP54-216ENST00000514901 ANO9A1A5B4 782 aa15.43■□□□□ 0.06
NUP54-216ENST00000514901 BICDL2A1A5D9 508 aa15.43■□□□□ 0.06
NUP54-216ENST00000514901 ARHGEF37A1IGU5 675 aa15.43■□□□□ 0.06
NUP54-216ENST00000514901 F8W810 466 aa15.43■□□□□ 0.06
NUP54-216ENST00000514901 BIN1O00499 593 aa15.43■□□□□ 0.06
NUP54-216ENST00000514901 PIRO00625 290 aa15.43■□□□□ 0.06
NUP54-216ENST00000514901 CETN3O15182 167 aa15.43■□□□□ 0.06
NUP54-216ENST00000514901 TNNC2P02585 160 aa15.43■□□□□ 0.06
NUP54-216ENST00000514901 PTMSP20962 102 aa15.43■□□□□ 0.06
NUP54-216ENST00000514901 CCNE1P24864 410 aa15.43■□□□□ 0.06
NUP54-216ENST00000514901 GLUD2P49448 558 aa15.43■□□□□ 0.06
NUP54-216ENST00000514901 AP3M2P53677 418 aa15.43■□□□□ 0.06
NUP54-216ENST00000514901 FKBP3Q00688 224 aaKnown RBP15.43■□□□□ 0.06
NUP54-216ENST00000514901 CREMQ03060 361 aa15.43■□□□□ 0.06
NUP54-216ENST00000514901 ENPEPQ07075 957 aa15.43■□□□□ 0.06
NUP54-216ENST00000514901 FAM171A1Q5VUB5 890 aa15.43■□□□□ 0.06
NUP54-216ENST00000514901 KIAA0319Q5VV43 1072 aa15.43■□□□□ 0.06
NUP54-216ENST00000514901 C9orf57Q5W0N0 161 aa15.43■□□□□ 0.06
NUP54-216ENST00000514901 CEP135Q66GS9 1140 aa15.43■□□□□ 0.06
NUP54-216ENST00000514901 CD300LGQ6UXG3 332 aa15.43■□□□□ 0.06
NUP54-216ENST00000514901 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.43■□□□□ 0.06
NUP54-216ENST00000514901 TAS1R1Q7RTX1 841 aa15.43■□□□□ 0.06
NUP54-216ENST00000514901 WDR49Q8IV35 697 aa15.43■□□□□ 0.06
NUP54-216ENST00000514901 HASPINQ8TF76 798 aa15.43■□□□□ 0.06
NUP54-216ENST00000514901 PPM1EQ8WY54 764 aa15.43■□□□□ 0.06
NUP54-216ENST00000514901 TTPALQ9BTX7 342 aa15.43■□□□□ 0.06
NUP54-216ENST00000514901 EMILIN2Q9BXX0 1053 aa15.43■□□□□ 0.06
NUP54-216ENST00000514901 INTS13Q9NVM9 706 aa15.43■□□□□ 0.06
NUP54-216ENST00000514901 ITGA11Q9UKX5 1188 aa15.43■□□□□ 0.06
NUP54-216ENST00000514901 R3HCC1Q9Y3T6 440 aaKnown RBP15.43■□□□□ 0.06
NUP54-216ENST00000514901 ANK1P16157 1881 aa15.43■□□□□ 0.06
NUP54-216ENST00000514901 COL6A3P12111 3177 aa15.42■□□□□ 0.06
NUP54-216ENST00000514901 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.42■□□□□ 0.06
NUP54-216ENST00000514901 PPP1R3GB7ZBB8 358 aa15.42■□□□□ 0.06
NUP54-216ENST00000514901 SYN3O14994 580 aa15.42■□□□□ 0.06
NUP54-216ENST00000514901 LILRB3O75022 631 aa15.42■□□□□ 0.06
NUP54-216ENST00000514901 CSPG5O95196 566 aa15.42■□□□□ 0.06
NUP54-216ENST00000514901 TMEM191BP0C7N4 346 aa15.42■□□□□ 0.06
NUP54-216ENST00000514901 TNNI1P19237 187 aa15.42■□□□□ 0.06
NUP54-216ENST00000514901 BMP6P22004 513 aa15.42■□□□□ 0.06
NUP54-216ENST00000514901 CA8P35219 290 aa15.42■□□□□ 0.06
NUP54-216ENST00000514901 PSMC2P35998 433 aaKnown RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms