RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 NDST4Q9H3R1 872 aa12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 TBC1D13Q9NVG8 400 aa12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 MIOSQ9NXC5 875 aa12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 KLK14Q9P0G3 267 aa12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 ITGA11Q9UKX5 1188 aa12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 ANO9A1A5B4 782 aa12.94□□□□□ -0.34
PDLIM5-220ENST00000514830 ZBBXA8MT70 800 aa12.94□□□□□ -0.34
PDLIM5-220ENST00000514830 STAU1O95793 577 aaKnown RBP12.94□□□□□ -0.34
PDLIM5-220ENST00000514830 TNNC2P02585 160 aa12.94□□□□□ -0.34
PDLIM5-220ENST00000514830 TMEM191BP0C7N4 346 aa12.94□□□□□ -0.34
PDLIM5-220ENST00000514830 TRIM49P0CI25 452 aa12.94□□□□□ -0.34
PDLIM5-220ENST00000514830 TRIM49CP0CI26 452 aa12.94□□□□□ -0.34
PDLIM5-220ENST00000514830 RPL9P32969 192 aaKnown RBP12.94□□□□□ -0.34
PDLIM5-220ENST00000514830 MXI1P50539 228 aa12.94□□□□□ -0.34
PDLIM5-220ENST00000514830 SCNN1GP51170 649 aa12.94□□□□□ -0.34
PDLIM5-220ENST00000514830 AFF1P51825 1210 aaKnown RBP12.94□□□□□ -0.34
PDLIM5-220ENST00000514830 FANCCQ00597 558 aa12.94□□□□□ -0.34
PDLIM5-220ENST00000514830 TUSC3Q13454 348 aa12.94□□□□□ -0.34
PDLIM5-220ENST00000514830 HSP90AA4PQ58FG1 418 aa12.94□□□□□ -0.34
PDLIM5-220ENST00000514830 DCAF17Q5H9S7 520 aaPredicted RBP12.94□□□□□ -0.34
PDLIM5-220ENST00000514830 C9orf50Q5SZB4 431 aa12.94□□□□□ -0.34
PDLIM5-220ENST00000514830 SV2AQ7L0J3 742 aa12.94□□□□□ -0.34
PDLIM5-220ENST00000514830 TRAPPC11Q7Z392 1133 aa12.94□□□□□ -0.34
PDLIM5-220ENST00000514830 HERC6Q8IVU3 1022 aa12.94□□□□□ -0.34
PDLIM5-220ENST00000514830 LRRC43Q8N309 656 aa12.94□□□□□ -0.34
PDLIM5-220ENST00000514830 BEST2Q8NFU1 509 aa12.94□□□□□ -0.34
PDLIM5-220ENST00000514830 OR5B17Q8NGF7 314 aa12.94□□□□□ -0.34
PDLIM5-220ENST00000514830 FAM212AQ96EL1 285 aa12.94□□□□□ -0.34
PDLIM5-220ENST00000514830 DDX27Q96GQ7 796 aaKnown RBP12.94□□□□□ -0.34
PDLIM5-220ENST00000514830 FAXDC2Q96IV6 333 aa12.94□□□□□ -0.34
PDLIM5-220ENST00000514830 POP1Q99575 1024 aaKnown RBP12.94□□□□□ -0.34
PDLIM5-220ENST00000514830 RAD9AQ99638 391 aa12.94□□□□□ -0.34
PDLIM5-220ENST00000514830 VRTNQ9H8Y1 702 aa12.94□□□□□ -0.34
PDLIM5-220ENST00000514830 RTN4Q9NQC3 1192 aaKnown RBP12.94□□□□□ -0.34
PDLIM5-220ENST00000514830 DPP3Q9NY33 737 aa12.94□□□□□ -0.34
PDLIM5-220ENST00000514830 PLAGL2Q9UPG8 496 aa12.94□□□□□ -0.34
PDLIM5-220ENST00000514830 INSL6Q9Y581 213 aa12.94□□□□□ -0.34
PDLIM5-220ENST00000514830 TMEM189-UBE2V1I3L0A0 370 aa12.93□□□□□ -0.34
PDLIM5-220ENST00000514830 ATP2A2P16615 1042 aaKnown RBP12.93□□□□□ -0.34
PDLIM5-220ENST00000514830 ATICP31939 592 aa12.93□□□□□ -0.34
PDLIM5-220ENST00000514830 TFAMQ00059 246 aaKnown RBP12.93□□□□□ -0.34
PDLIM5-220ENST00000514830 SOX4Q06945 474 aaPredicted RBP12.93□□□□□ -0.34
PDLIM5-220ENST00000514830 CETN1Q12798 172 aa12.93□□□□□ -0.34
PDLIM5-220ENST00000514830 NR1I3Q14994 352 aa12.93□□□□□ -0.34
PDLIM5-220ENST00000514830 SHHQ15465 462 aa12.93□□□□□ -0.34
PDLIM5-220ENST00000514830 FILIP1LQ4L180 1135 aa12.93□□□□□ -0.34
PDLIM5-220ENST00000514830 CBWD6Q4V339 395 aa12.93□□□□□ -0.34
PDLIM5-220ENST00000514830 EPC2Q52LR7 807 aa12.93□□□□□ -0.34
PDLIM5-220ENST00000514830 CBWD3Q5JTY5 395 aa12.93□□□□□ -0.34
PDLIM5-220ENST00000514830 CBWD5Q5RIA9 395 aa12.93□□□□□ -0.34
PDLIM5-220ENST00000514830 ZNF697Q5TEC3 545 aa12.93□□□□□ -0.34
PDLIM5-220ENST00000514830 TCERG1LQ5VWI1 586 aa12.93□□□□□ -0.34
PDLIM5-220ENST00000514830 TDRD10Q5VZ19 366 aaKnown RBP12.93□□□□□ -0.34
PDLIM5-220ENST00000514830 Q7L0L9 218 aa12.93□□□□□ -0.34
PDLIM5-220ENST00000514830 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.93□□□□□ -0.34
PDLIM5-220ENST00000514830 COLGALT2Q8IYK4 626 aa12.93□□□□□ -0.34
PDLIM5-220ENST00000514830 LRRC52Q8N7C0 313 aa12.93□□□□□ -0.34
PDLIM5-220ENST00000514830 C1orf127Q8N9H9 656 aa12.93□□□□□ -0.34
PDLIM5-220ENST00000514830 TAF4BQ92750 862 aa12.93□□□□□ -0.34
PDLIM5-220ENST00000514830 RNPC3Q96LT9 517 aaKnown RBP12.93□□□□□ -0.34
PDLIM5-220ENST00000514830 TMEM175Q9BSA9 504 aa12.93□□□□□ -0.34
PDLIM5-220ENST00000514830 MTMR12Q9C0I1 747 aa12.93□□□□□ -0.34
PDLIM5-220ENST00000514830 TAB2Q9NYJ8 693 aa12.93□□□□□ -0.34
PDLIM5-220ENST00000514830 TBKBP1A7MCY6 615 aa12.92□□□□□ -0.34
PDLIM5-220ENST00000514830 PIRO00625 290 aa12.92□□□□□ -0.34
PDLIM5-220ENST00000514830 CBFA2T2O43439 604 aa12.92□□□□□ -0.34
PDLIM5-220ENST00000514830 ZC3H11AO75152 810 aaKnown RBP eCLIP12.92□□□□□ -0.34
PDLIM5-220ENST00000514830 UPP2O95045 317 aa12.92□□□□□ -0.34
PDLIM5-220ENST00000514830 VNN1O95497 513 aa12.92□□□□□ -0.34
PDLIM5-220ENST00000514830 SERPINC1P01008 464 aa12.92□□□□□ -0.34
PDLIM5-220ENST00000514830 POMCP01189 267 aa12.92□□□□□ -0.34
PDLIM5-220ENST00000514830 PNPLA4P41247 253 aa12.92□□□□□ -0.34
PDLIM5-220ENST00000514830 GCLMP48507 274 aa12.92□□□□□ -0.34
PDLIM5-220ENST00000514830 MYL7Q01449 175 aa12.92□□□□□ -0.34
PDLIM5-220ENST00000514830 UPP1Q16831 310 aa12.92□□□□□ -0.34
PDLIM5-220ENST00000514830 GLRA4Q5JXX5 417 aa12.92□□□□□ -0.34
PDLIM5-220ENST00000514830 FBXL13Q8NEE6 735 aa12.92□□□□□ -0.34
PDLIM5-220ENST00000514830 LMO3Q8TAP4 145 aa12.92□□□□□ -0.34
PDLIM5-220ENST00000514830 CLP1Q92989 425 aaKnown RBP12.92□□□□□ -0.34
PDLIM5-220ENST00000514830 C18orf25Q96B23 403 aaPredicted RBP12.92□□□□□ -0.34
PDLIM5-220ENST00000514830 ERGIC2Q96RQ1 377 aa12.92□□□□□ -0.34
PDLIM5-220ENST00000514830 VPS16Q9H269 839 aa12.92□□□□□ -0.34
PDLIM5-220ENST00000514830 CWH43Q9H720 699 aa12.92□□□□□ -0.34
PDLIM5-220ENST00000514830 TUBGCP4Q9UGJ1 667 aa12.92□□□□□ -0.34
PDLIM5-220ENST00000514830 SIX4Q9UIU6 781 aa12.92□□□□□ -0.34
PDLIM5-220ENST00000514830 INPP5FQ9Y2H2 1132 aa12.92□□□□□ -0.34
PDLIM5-220ENST00000514830 DAAM1Q9Y4D1 1078 aa12.92□□□□□ -0.34
PDLIM5-220ENST00000514830 COL6A3P12111 3177 aa12.91□□□□□ -0.34
PDLIM5-220ENST00000514830 A0A1W2PQC6 194 aa12.91□□□□□ -0.34
PDLIM5-220ENST00000514830 GOLGA6L3A6NEY3 463 aa12.91□□□□□ -0.34
PDLIM5-220ENST00000514830 DDHD2O94830 711 aa12.91□□□□□ -0.34
PDLIM5-220ENST00000514830 TPM3P06753 285 aa12.91□□□□□ -0.34
PDLIM5-220ENST00000514830 GATMP50440 423 aa12.91□□□□□ -0.34
PDLIM5-220ENST00000514830 UBASH3AP57075 661 aa12.91□□□□□ -0.34
PDLIM5-220ENST00000514830 RBP5P82980 135 aa12.91□□□□□ -0.34
PDLIM5-220ENST00000514830 RNASELQ05823 741 aaKnown RBP12.91□□□□□ -0.34
PDLIM5-220ENST00000514830 NCOA4Q13772 614 aa12.91□□□□□ -0.34
PDLIM5-220ENST00000514830 FKBP15Q5T1M5 1219 aa12.91□□□□□ -0.34
PDLIM5-220ENST00000514830 C9orf57Q5W0N0 161 aa12.91□□□□□ -0.34
PDLIM5-220ENST00000514830 LMBRD2Q68DH5 695 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms