RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 G3V3G9 751 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 NOL4O94818 638 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 PLA2G4BP0C869 781 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 SPATA31C1P0DKV0 1188 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 MZF1P28698 734 aaPredicted RBP7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 SCTRP47872 440 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 MARSP56192 900 aaKnown RBP7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 UBXN2AP68543 259 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 KRT83P78385 493 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 ARHGAP4P98171 946 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 CACNB1Q02641 598 aaPredicted RBP7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 ASTE1Q2TB18 679 aaPredicted RBP7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 KIAA1755Q5JYT7 1200 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 FAM26FQ5R3K3 315 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 MAEAQ7L5Y9 396 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 NT5DC4Q86YG4 428 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 ARL6IP6Q8N6S5 226 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 PDCD7Q8N8D1 485 aaKnown RBP7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 APPL2Q8NEU8 664 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 FBXO22Q8NEZ5 403 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 TRPC4APQ8TEL6 797 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 SCFD1Q8WVM8 642 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 GBP5Q96PP8 586 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 NAP1L4Q99733 375 aaKnown RBP7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 SNX25Q9H3E2 840 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 FAM207AQ9NSI2 230 aaPredicted RBP7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 CCPG1Q9ULG6 757 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 LRRC53A6NM62 1247 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 C2orf81A6NN90 581 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 ASAP2O43150 1006 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 RASA4O43374 803 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 KATNA1O75449 491 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 DGKIO75912 1065 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 CYLC1P35663 651 aaPredicted RBP7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 GGCXP38435 758 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 VAV2P52735 878 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 PSMC6P62333 389 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 MCL1Q07820 350 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 ABCB5Q2M3G0 1257 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 HGSNATQ68CP4 663 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 POTEGQ6S5H5 508 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 BTNL9Q6UXG8 535 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 CATSPER3Q86XQ3 398 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 FLAD1Q8NFF5 587 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 LENG1Q96BZ8 264 aaPredicted RBP7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 IQCDQ96DY2 449 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 PRMT6Q96LA8 375 aaPredicted RBP7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 RIMKLBQ9ULI2 386 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 LOC105371267A0A1B0GV96 52 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 CTAGE15A4D2H0 777 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 GRXCR2A6NFK2 248 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 NOTOA8MTQ0 251 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 C19orf81C9J6K1 198 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 DNM1LO00429 736 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 TSPAN9O75954 239 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 STAMBPO95630 424 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 GNA14O95837 355 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 ALDH2P05091 517 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 CTAGE8P0CG41 777 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 SREBF1P36956 1147 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 SERPINB4P48594 390 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 MXI1P50539 228 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 GPC3P51654 580 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 CASP5P51878 434 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 HSD17B7P56937 341 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 SYDE2Q5VT97 1194 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 NOP9Q86U38 636 aaKnown RBP7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 CTAGE6Q86UF2 777 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 CTAGE4Q8IX94 777 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 FRS2Q8WU20 508 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 MMS19Q96T76 1030 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 AMNQ9BXJ7 453 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 POLMQ9NP87 494 aaPredicted RBP7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 FANCFQ9NPI8 374 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 TCF7L2Q9NQB0 619 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 HACD3Q9P035 362 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 VAV3Q9UKW4 847 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 MKL2Q9ULH7 1088 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 ZBTB21Q9ULJ3 1066 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 HPCAL4Q9UM19 191 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 COL4A3BPQ9Y5P4 624 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 WDR81Q562E7 1941 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 ENTPD3O75355 529 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 COL6A1P12109 1028 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 HMGB2P26583 209 aaKnown RBP7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 HOXD13P35453 343 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 ACADSBP45954 432 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 DSTNP60981 165 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 PSMD6Q15008 389 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 RASIP1Q5U651 963 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 DPY19L2P1Q6NXN4 242 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 GPBP1Q86WP2 473 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 GSPT2Q8IYD1 628 aaKnown RBP7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 SLAIN1Q8ND83 568 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 MIS12Q9H081 205 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 CNGB3Q9NQW8 809 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 GGA2Q9UJY4 613 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 CAPN6Q9Y6Q1 641 aa7.93□□□□□ -1.14
PDLIM5-219ENST00000514743 MACROD2A1Z1Q3 448 aa7.92□□□□□ -1.14
PDLIM5-219ENST00000514743 H0YIN7 160 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms