RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 RAD9BQ6WBX8 426 aa10.67□□□□□ -0.7
TPM3-221ENST00000513769 WDR49Q8IV35 697 aa10.67□□□□□ -0.7
TPM3-221ENST00000513769 ARRDC4Q8NCT1 418 aa10.67□□□□□ -0.7
TPM3-221ENST00000513769 KIF18AQ8NI77 898 aa10.67□□□□□ -0.7
TPM3-221ENST00000513769 CCDC127Q96BQ5 260 aa10.67□□□□□ -0.7
TPM3-221ENST00000513769 ZBTB45Q96K62 511 aaPredicted RBP10.67□□□□□ -0.7
TPM3-221ENST00000513769 TSGA10Q9BZW7 698 aa10.67□□□□□ -0.7
TPM3-221ENST00000513769 HMX1Q9NP08 348 aaPredicted RBP10.67□□□□□ -0.7
TPM3-221ENST00000513769 XPNPEP3Q9NQH7 507 aa10.67□□□□□ -0.7
TPM3-221ENST00000513769 CHST12Q9NRB3 414 aa10.67□□□□□ -0.7
TPM3-221ENST00000513769 TOR4AQ9NXH8 423 aa10.67□□□□□ -0.7
TPM3-221ENST00000513769 RBAKQ9NYW8 714 aaPredicted RBP10.67□□□□□ -0.7
TPM3-221ENST00000513769 DNAJC12Q9UKB3 198 aa10.67□□□□□ -0.7
TPM3-221ENST00000513769 TRIM17Q9Y577 477 aa10.67□□□□□ -0.7
TPM3-221ENST00000513769 ATP8B3O60423 1300 aa10.66□□□□□ -0.7
TPM3-221ENST00000513769 CNTNAP2Q9UHC6 1331 aa10.66□□□□□ -0.7
TPM3-221ENST00000513769 SOWAHDA6NJG2 315 aa10.66□□□□□ -0.7
TPM3-221ENST00000513769 EPHB6O15197 1021 aa10.66□□□□□ -0.7
TPM3-221ENST00000513769 AKR1B10O60218 316 aa10.66□□□□□ -0.7
TPM3-221ENST00000513769 FAM189A1O60320 539 aa10.66□□□□□ -0.7
TPM3-221ENST00000513769 ADAMTS4O75173 837 aa10.66□□□□□ -0.7
TPM3-221ENST00000513769 ERLIN2O94905 339 aa10.66□□□□□ -0.7
TPM3-221ENST00000513769 TNNT1P13805 278 aa10.66□□□□□ -0.7
TPM3-221ENST00000513769 DARSP14868 501 aaKnown RBP10.66□□□□□ -0.7
TPM3-221ENST00000513769 SOX5P35711 763 aa10.66□□□□□ -0.7
TPM3-221ENST00000513769 ACOT2P49753 483 aa10.66□□□□□ -0.7
TPM3-221ENST00000513769 KLHL30Q0D2K2 578 aa10.66□□□□□ -0.7
TPM3-221ENST00000513769 BMS1Q14692 1282 aaKnown RBP10.66□□□□□ -0.7
TPM3-221ENST00000513769 AMHR2Q16671 573 aa10.66□□□□□ -0.7
TPM3-221ENST00000513769 DCAF4L1Q3SXM0 396 aa10.66□□□□□ -0.7
TPM3-221ENST00000513769 HGSNATQ68CP4 663 aa10.66□□□□□ -0.7
TPM3-221ENST00000513769 PHLDB3Q6NSJ2 640 aa10.66□□□□□ -0.7
TPM3-221ENST00000513769 BRSK2Q8IWQ3 736 aa10.66□□□□□ -0.7
TPM3-221ENST00000513769 CYP4X1Q8N118 509 aa10.66□□□□□ -0.7
TPM3-221ENST00000513769 RNF10Q8N5U6 811 aaKnown RBP10.66□□□□□ -0.7
TPM3-221ENST00000513769 PLEKHO2Q8TD55 490 aa10.66□□□□□ -0.7
TPM3-221ENST00000513769 SAAL1Q96ER3 474 aa10.66□□□□□ -0.7
TPM3-221ENST00000513769 PPP1R13BQ96KQ4 1090 aa10.66□□□□□ -0.7
TPM3-221ENST00000513769 CGRRF1Q99675 332 aa10.66□□□□□ -0.7
TPM3-221ENST00000513769 HAPLN2Q9GZV7 340 aa10.66□□□□□ -0.7
TPM3-221ENST00000513769 INTS2Q9H0H0 1204 aaKnown RBP10.66□□□□□ -0.7
TPM3-221ENST00000513769 DEF6Q9H4E7 631 aa10.66□□□□□ -0.7
TPM3-221ENST00000513769 RPF1Q9H9Y2 349 aaKnown RBP10.66□□□□□ -0.7
TPM3-221ENST00000513769 UBE2TQ9NPD8 197 aaPredicted RBP10.66□□□□□ -0.7
TPM3-221ENST00000513769 NLRC4Q9NPP4 1024 aa10.66□□□□□ -0.7
TPM3-221ENST00000513769 TRMT1Q9NXH9 659 aaKnown RBP10.66□□□□□ -0.7
TPM3-221ENST00000513769 ARHGAP20Q9P2F6 1191 aa10.66□□□□□ -0.7
TPM3-221ENST00000513769 HDAC6Q9UBN7 1215 aa10.66□□□□□ -0.7
TPM3-221ENST00000513769 DDX20Q9UHI6 824 aaKnown RBP10.66□□□□□ -0.7
TPM3-221ENST00000513769 GTF2IRD1Q9UHL9 959 aa10.66□□□□□ -0.7
TPM3-221ENST00000513769 INTUQ9ULD6 942 aa10.66□□□□□ -0.7
TPM3-221ENST00000513769 DERAQ9Y315 318 aa10.66□□□□□ -0.7
TPM3-221ENST00000513769 ST8SIA5O15466 376 aa10.65□□□□□ -0.7
TPM3-221ENST00000513769 PJA2O43164 708 aa10.65□□□□□ -0.7
TPM3-221ENST00000513769 CAND2O75155 1236 aa10.65□□□□□ -0.7
TPM3-221ENST00000513769 VTNP04004 478 aa10.65□□□□□ -0.7
TPM3-221ENST00000513769 IQCF3P0C7M6 154 aa10.65□□□□□ -0.7
TPM3-221ENST00000513769 TRIM49P0CI25 452 aa10.65□□□□□ -0.7
TPM3-221ENST00000513769 TRIM49CP0CI26 452 aa10.65□□□□□ -0.7
TPM3-221ENST00000513769 ARF4P18085 180 aaPredicted RBP10.65□□□□□ -0.7
TPM3-221ENST00000513769 TBXAS1P24557 533 aaPredicted RBP10.65□□□□□ -0.7
TPM3-221ENST00000513769 ATICP31939 592 aa10.65□□□□□ -0.7
TPM3-221ENST00000513769 BEX3Q00994 111 aa10.65□□□□□ -0.7
TPM3-221ENST00000513769 GOLGA8FQ08AF8 430 aa10.65□□□□□ -0.7
TPM3-221ENST00000513769 GOLGA8DPQ0D2H9 430 aa10.65□□□□□ -0.7
TPM3-221ENST00000513769 KIF5AQ12840 1032 aa10.65□□□□□ -0.7
TPM3-221ENST00000513769 DRAP1Q14919 205 aaPredicted RBP10.65□□□□□ -0.7
TPM3-221ENST00000513769 KCNA10Q16322 511 aa10.65□□□□□ -0.7
TPM3-221ENST00000513769 ASIC2Q16515 512 aa10.65□□□□□ -0.7
TPM3-221ENST00000513769 SLC18A3Q16572 532 aa10.65□□□□□ -0.7
TPM3-221ENST00000513769 NBPF20Q3BBV1 942 aa10.65□□□□□ -0.7
TPM3-221ENST00000513769 HABP4Q5JVS0 413 aaKnown RBP10.65□□□□□ -0.7
TPM3-221ENST00000513769 IQCEQ6IPM2 695 aa10.65□□□□□ -0.7
TPM3-221ENST00000513769 NOTUMQ6P988 496 aa10.65□□□□□ -0.7
TPM3-221ENST00000513769 USP38Q8NB14 1042 aa10.65□□□□□ -0.7
TPM3-221ENST00000513769 CD99L2Q8TCZ2 262 aa10.65□□□□□ -0.7
TPM3-221ENST00000513769 NT5C1BQ96P26 610 aa10.65□□□□□ -0.7
TPM3-221ENST00000513769 ACAP3Q96P50 834 aa10.65□□□□□ -0.7
TPM3-221ENST00000513769 CELF4Q9BZC1 486 aaKnown RBP10.65□□□□□ -0.7
TPM3-221ENST00000513769 MINDY3Q9H8M7 445 aa10.65□□□□□ -0.7
TPM3-221ENST00000513769 EVPLQ92817 2033 aa10.65□□□□□ -0.71
TPM3-221ENST00000513769 BTNL10A8MVZ5 291 aa10.64□□□□□ -0.71
TPM3-221ENST00000513769 M0QZ92 97 aa10.64□□□□□ -0.71
TPM3-221ENST00000513769 FOXN3O00409 490 aaPredicted RBP10.64□□□□□ -0.71
TPM3-221ENST00000513769 TREHO43280 583 aa10.64□□□□□ -0.71
TPM3-221ENST00000513769 KIF5CO60282 957 aa10.64□□□□□ -0.71
TPM3-221ENST00000513769 ASGR1P07306 291 aa10.64□□□□□ -0.71
TPM3-221ENST00000513769 DLATP10515 647 aaKnown RBP10.64□□□□□ -0.71
TPM3-221ENST00000513769 GZMAP12544 262 aa10.64□□□□□ -0.71
TPM3-221ENST00000513769 ACTN1P12814 892 aa10.64□□□□□ -0.71
TPM3-221ENST00000513769 HOXA11P31270 313 aaPredicted RBP10.64□□□□□ -0.71
TPM3-221ENST00000513769 GRK4P32298 578 aa10.64□□□□□ -0.71
TPM3-221ENST00000513769 EIF4A3P38919 411 aaKnown RBP10.64□□□□□ -0.71
TPM3-221ENST00000513769 GRM5P41594 1212 aa10.64□□□□□ -0.71
TPM3-221ENST00000513769 MAGEA1P43355 309 aa10.64□□□□□ -0.71
TPM3-221ENST00000513769 TUBB4BP68371 445 aa10.64□□□□□ -0.71
TPM3-221ENST00000513769 NAB2Q15742 525 aa10.64□□□□□ -0.71
TPM3-221ENST00000513769 TMEM132AQ24JP5 1023 aa10.64□□□□□ -0.71
TPM3-221ENST00000513769 ZNF568Q3ZCX4 644 aa10.64□□□□□ -0.71
TPM3-221ENST00000513769 ARHGAP29Q52LW3 1261 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms